Cow genome map


           Conread name:
           Ova1-OVRM10224H10
        

               Conread position:
               1-179
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               86, 17
               

               Conread position:
               1-220
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               86, 17
               

               Conread position:
               1-228
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               86, 17
               

               Conread position:
               1-273
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 17
               

               Conread position:
               1-455
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 17
               

               Conread position:
               1-460
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 17
               

               Conread position:
               1-570
               

               Cow position:
               
               

               Alignm length:
               588
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 17
               

               Conread position:
               1-703
               

               Cow position:
               
               

               Alignm length:
               727
               

               Alignm identity:
               531
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 17
               

               Conread position:
               1-703
               

               Cow position:
               
               

               Alignm length:
               722
               

               Alignm identity:
               541
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 17
               

               Conread position:
               1-703
               

               Cow position:
               
               

               Alignm length:
               723
               

               Alignm identity:
               534
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 17
               

               Conread position:
               3-410
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               263
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               103, 11
               

               Conread position:
               9-703
               

               Cow position:
               
               

               Alignm length:
               727
               

               Alignm identity:
               542
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 358
               

               Conread position:
               14-299
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 49
               

               Conread position:
               14-703
               

               Cow position:
               
               

               Alignm length:
               708
               

               Alignm identity:
               501
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 274
               

               Conread position:
               14-703
               

               Cow position:
               
               

               Alignm length:
               712
               

               Alignm identity:
               511
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 245
               

               Conread position:
               14-703
               

               Cow position:
               
               

               Alignm length:
               713
               

               Alignm identity:
               530
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 354
               

               Conread position:
               14-703
               

               Cow position:
               
               

               Alignm length:
               706
               

               Alignm identity:
               481
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 123
               

               Conread position:
               14-703
               

               Cow position:
               
               

               Alignm length:
               714
               

               Alignm identity:
               532
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 249
               

               Conread position:
               14-712
               

               Cow position:
               
               

               Alignm length:
               737
               

               Alignm identity:
               523
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 377
               

               Conread position:
               15-341
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               235
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               69, 114
               

               Conread position:
               15-434
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 355
               

               Conread position:
               15-477
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 315
               

               Conread position:
               15-703
               

               Cow position:
               
               

               Alignm length:
               702
               

               Alignm identity:
               515
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 67
               

               Conread position:
               15-703
               

               Cow position:
               
               

               Alignm length:
               708
               

               Alignm identity:
               530
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 351
               

               Conread position:
               18-334
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               18-419
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 191
               

               Conread position:
               18-699
               

               Cow position:
               
               

               Alignm length:
               701
               

               Alignm identity:
               523
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 344
               

               Conread position:
               18-703
               

               Cow position:
               
               

               Alignm length:
               696
               

               Alignm identity:
               503
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               204, 81
               

               Conread position:
               18-703
               

               Cow position:
               
               

               Alignm length:
               718
               

               Alignm identity:
               528
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 48
               

               Conread position:
               18-703
               

               Cow position:
               
               

               Alignm length:
               705
               

               Alignm identity:
               521
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 349
               

               Conread position:
               18-703
               

               Cow position:
               
               

               Alignm length:
               705
               

               Alignm identity:
               526
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 241
               

               Conread position:
               18-703
               

               Cow position:
               
               

               Alignm length:
               710
               

               Alignm identity:
               535
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 353
               

               Conread position:
               18-703
               

               Cow position:
               
               

               Alignm length:
               712
               

               Alignm identity:
               544
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 356
               

               Conread position:
               18-703
               

               Cow position:
               
               

               Alignm length:
               693
               

               Alignm identity:
               454
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               269, 81
               

               Conread position:
               20-703
               

               Cow position:
               
               

               Alignm length:
               703
               

               Alignm identity:
               529
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 347
               

               Conread position:
               21-169
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               21-182
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               66, 38
               

               Conread position:
               21-279
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               181
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               59, 125
               

               Conread position:
               21-550
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 130
               

               Conread position:
               21-552
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 342
               

               Conread position:
               21-558
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 340
               

               Conread position:
               21-626
               

               Cow position:
               
               

               Alignm length:
               624
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 24
               

               Conread position:
               21-703
               

               Cow position:
               
               

               Alignm length:
               699
               

               Alignm identity:
               515
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 16
               

               Conread position:
               21-703
               

               Cow position:
               
               

               Alignm length:
               705
               

               Alignm identity:
               517
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 124
               

               Conread position:
               21-703
               

               Cow position:
               
               

               Alignm length:
               705
               

               Alignm identity:
               528
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 188
               

               Conread position:
               21-703
               

               Cow position:
               
               

               Alignm length:
               705
               

               Alignm identity:
               514
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 18
               

               Conread position:
               21-708
               

               Cow position:
               
               

               Alignm length:
               706
               

               Alignm identity:
               501
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 100
               

               Conread position:
               33-552
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 405
               

               Conread position:
               33-703
               

               Cow position:
               
               

               Alignm length:
               690
               

               Alignm identity:
               515
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 334
               

               Conread position:
               36-380
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 31
               

               Conread position:
               39-638
               

               Cow position:
               
               

               Alignm length:
               623
               

               Alignm identity:
               386
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               45, 88
               

               Conread position:
               39-712
               

               Cow position:
               
               

               Alignm length:
               707
               

               Alignm identity:
               518
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 327
               

               Conread position:
               43-645
               

               Cow position:
               
               

               Alignm length:
               624
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 121
               

               Conread position:
               44-703
               

               Cow position:
               
               

               Alignm length:
               699
               

               Alignm identity:
               505
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 87
               

               Conread position:
               45-296
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               42, 207
               

               Conread position:
               45-703
               

               Cow position:
               
               

               Alignm length:
               689
               

               Alignm identity:
               514
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 329
               

               Conread position:
               46-473
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 154
               

               Conread position:
               61-550
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 311
               

               Conread position:
               64-703
               

               Cow position:
               
               

               Alignm length:
               660
               

               Alignm identity:
               494
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 300
               

               Conread position:
               87-429
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 277
               

               Conread position:
               87-710
               

               Cow position:
               
               

               Alignm length:
               636
               

               Alignm identity:
               436
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 28
               

               Conread position:
               94-703
               

               Cow position:
               
               

               Alignm length:
               621
               

               Alignm identity:
               468
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 186
               

               Conread position:
               105-645
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 189
               

               Conread position:
               111-703
               

               Cow position:
               
               

               Alignm length:
               603
               

               Alignm identity:
               459
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 202
               

               Conread position:
               131-373
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               142-703
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 209
               

               Conread position:
               157-708
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 174
               

               Conread position:
               158-703
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 197
               

               Conread position:
               184-703
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 176
               

               Conread position:
               193-657
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 142
               

               Conread position:
               214-643
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 146
               

               Conread position:
               219-703
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 72
               

               Conread position:
               221-441
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               81, 132
               

               Conread position:
               222-520
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 132
               

               Conread position:
               223-703
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 131
               

               Conread position:
               228-415
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               41, 16
               

               Conread position:
               228-666
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 34
               

               Conread position:
               229-414
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               74, 46
               

               Conread position:
               240-703
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 109
               

               Conread position:
               246-712
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 32
               

               Conread position:
               250-547
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               220
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               50, 5
               

               Conread position:
               250-703
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 102
               

               Conread position:
               300-666
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 55
               

               Conread position:
               300-707
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 109
               

               Conread position:
               301-657
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 38
               

               Conread position:
               301-703
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 54
               

               Conread position:
               306-596
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 44
               

               Conread position:
               307-703
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               171, 48
               

               Conread position:
               316-703
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 36
               

               Conread position:
               318-556
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 35
               

               Conread position:
               325-703
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 9
               

               Conread position:
               326-703
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 34
               

               Conread position:
               349-623
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               195
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               103, 52
               

               Conread position:
               354-577
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               98, 47
               

               Conread position:
               355-631
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 56
               

               Conread position:
               355-698
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 46
               

               Conread position:
               364-703
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 38
               

               Conread position:
               377-703
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 25
               

               Conread position:
               379-703
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 32
               

               Conread position:
               381-703
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 20
               

               Conread position:
               385-543
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               67, 17
               

               Conread position:
               388-703
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 14
               

               Conread position:
               394-701
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               217
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               200, 8
               

               Conread position:
               401-703
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               171, 0
               
Show alignments to all cow chromosomes.