Cow genome map

Conread name: Ova1-OVRM10224H10

Conread position: 1-179
Cow position: chr27:10260314-10260131 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 86, 17

Conread position: 1-220
Cow position: chr27:17404275-17404050 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 172
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 86, 17

Conread position: 1-228
Cow position: chr27:28042866-28042634 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 137
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 86, 17

Conread position: 1-273
Cow position: chr27:1031429-1031708 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 17

Conread position: 1-455
Cow position: chr27:26599516-26599963 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 17

Conread position: 1-460
Cow position: chr27:9332334-9332803 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 17

Conread position: 1-570
Cow position: chr27:12147056-12146477 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-703
Cow position: chr27:166334-165619 (view UCSC Genome Browser custom track)
Alignm length: 727
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 17

Conread position: 1-703
Cow position: chr27:1520268-1520980 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 541
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 17

Conread position: 1-703
Cow position: chr27:29036783-29036082 (view UCSC Genome Browser custom track)
Alignm length: 723
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 3-410
Cow position: chr27:27500833-27501237 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 263
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 103, 11

Conread position: 9-703
Cow position: chr27:8960438-8959716 (view UCSC Genome Browser custom track)
Alignm length: 727
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 358

Conread position: 14-299
Cow position: chr27:26552826-26552546 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 49

Conread position: 14-703
Cow position: chr27:1535781-1536469 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 274

Conread position: 14-703
Cow position: chr27:5913537-5914234 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 245

Conread position: 14-703
Cow position: chr27:15273477-15272770 (view UCSC Genome Browser custom track)
Alignm length: 713
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 354

Conread position: 14-703
Cow position: chr27:23318325-23317646 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 123

Conread position: 14-703
Cow position: chr27:26855659-26856348 (view UCSC Genome Browser custom track)
Alignm length: 714
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 249

Conread position: 14-712
Cow position: chr27:5924850-5925582 (view UCSC Genome Browser custom track)
Alignm length: 737
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 377

Conread position: 15-341
Cow position: chr27:11488613-11488947 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 235
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 69, 114

Conread position: 15-434
Cow position: chr27:18696938-18697370 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 355

Conread position: 15-477
Cow position: chr27:22722954-22723428 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 315

Conread position: 15-703
Cow position: chr27:14296822-14297507 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 67

Conread position: 15-703
Cow position: chr27:16031800-16031097 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 351

Conread position: 18-334
Cow position: chr27:8200407-8200740 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 0

Conread position: 18-419
Cow position: chr27:15034492-15034080 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 191

Conread position: 18-699
Cow position: chr27:4981972-4982668 (view UCSC Genome Browser custom track)
Alignm length: 701
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 344

Conread position: 18-703
Cow position: chr27:4332125-4331440 (view UCSC Genome Browser custom track)
Alignm length: 696
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 81

Conread position: 18-703
Cow position: chr27:9990606-9989902 (view UCSC Genome Browser custom track)
Alignm length: 718
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 48

Conread position: 18-703
Cow position: chr27:12749633-12750325 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 349

Conread position: 18-703
Cow position: chr27:15634732-15634042 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 241

Conread position: 18-703
Cow position: chr27:19524112-19523409 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 353

Conread position: 18-703
Cow position: chr27:20810014-20810716 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 544
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 356

Conread position: 18-703
Cow position: chr27:24296641-24295969 (view UCSC Genome Browser custom track)
Alignm length: 693
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 81

Conread position: 20-703
Cow position: chr27:25801603-25800907 (view UCSC Genome Browser custom track)
Alignm length: 703
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 347

Conread position: 21-169
Cow position: chr27:25798640-25798790 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 73, 0

Conread position: 21-182
Cow position: chr27:3995292-3995123 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 66, 38

Conread position: 21-279
Cow position: chr27:26657318-26657057 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 181
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 59, 125

Conread position: 21-550
Cow position: chr27:13900500-13901040 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 130

Conread position: 21-552
Cow position: chr27:10378790-10379334 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 342

Conread position: 21-558
Cow position: chr27:30035415-30035974 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 340

Conread position: 21-626
Cow position: chr27:27193752-27193140 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 24

Conread position: 21-703
Cow position: chr27:3232927-3232234 (view UCSC Genome Browser custom track)
Alignm length: 699
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 16

Conread position: 21-703
Cow position: chr27:21451046-21451743 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 124

Conread position: 21-703
Cow position: chr27:27290998-27291693 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 188

Conread position: 21-703
Cow position: chr27:27729870-27729187 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 18

Conread position: 21-708
Cow position: chr27:31267837-31268520 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 100

Conread position: 33-552
Cow position: chr27:16788838-16788284 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 405

Conread position: 33-703
Cow position: chr27:15543630-15544315 (view UCSC Genome Browser custom track)
Alignm length: 690
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 334

Conread position: 36-380
Cow position: chr27:3991631-3991981 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 31

Conread position: 39-638
Cow position: chr27:26621627-26621020 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 386
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 45, 88

Conread position: 39-712
Cow position: chr27:27665623-27666324 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 327

Conread position: 43-645
Cow position: chr27:17567728-17568342 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 121

Conread position: 44-703
Cow position: chr27:10578554-10579247 (view UCSC Genome Browser custom track)
Alignm length: 699
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 87

Conread position: 45-296
Cow position: chr27:26452798-26452535 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 193
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 42, 207

Conread position: 45-703
Cow position: chr27:13352922-13353606 (view UCSC Genome Browser custom track)
Alignm length: 689
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 329

Conread position: 46-473
Cow position: chr27:22742778-22742345 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 154

Conread position: 61-550
Cow position: chr27:22648263-22647760 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 311

Conread position: 64-703
Cow position: chr27:5984385-5983730 (view UCSC Genome Browser custom track)
Alignm length: 660
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 300

Conread position: 87-429
Cow position: chr27:773452-773799 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 277

Conread position: 87-710
Cow position: chr27:15405330-15405934 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 28

Conread position: 94-703
Cow position: chr27:8426546-8427158 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 186

Conread position: 105-645
Cow position: chr27:30571529-30572063 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 189

Conread position: 111-703
Cow position: chr27:8972149-8972744 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 202

Conread position: 131-373
Cow position: chr27:24260972-24260714 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 142-703
Cow position: chr27:1082430-1081862 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 209

Conread position: 157-708
Cow position: chr27:25799006-25799562 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 174

Conread position: 158-703
Cow position: chr27:27044932-27045477 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 197

Conread position: 184-703
Cow position: chr27:2000618-2001145 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 176

Conread position: 193-657
Cow position: chr27:3759657-3760126 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 142

Conread position: 214-643
Cow position: chr27:27235297-27234864 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 146

Conread position: 219-703
Cow position: chr27:25971786-25971298 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 72

Conread position: 221-441
Cow position: chr27:22329030-22329250 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 155
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 81, 132

Conread position: 222-520
Cow position: chr27:29447259-29446960 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 132

Conread position: 223-703
Cow position: chr27:26784640-26785117 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 131

Conread position: 228-415
Cow position: chr27:20716718-20716904 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 142
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 41, 16

Conread position: 228-666
Cow position: chr27:29811159-29811590 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 34

Conread position: 229-414
Cow position: chr27:8261675-8261858 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 74, 46

Conread position: 240-703
Cow position: chr27:26329768-26330232 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 109

Conread position: 246-712
Cow position: chr27:31249090-31249550 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 32

Conread position: 250-547
Cow position: chr27:7911829-7912123 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 220
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 50, 5

Conread position: 250-703
Cow position: chr27:27556653-27557102 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 102

Conread position: 300-666
Cow position: chr27:27849169-27849533 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 55

Conread position: 300-707
Cow position: chr27:1188554-1188972 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 109

Conread position: 301-657
Cow position: chr27:21284329-21283981 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 38

Conread position: 301-703
Cow position: chr27:13308544-13308944 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 54

Conread position: 306-596
Cow position: chr27:21342434-21342721 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 44

Conread position: 307-703
Cow position: chr27:2558085-2557689 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 48

Conread position: 316-703
Cow position: chr27:11434091-11434475 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 36

Conread position: 318-556
Cow position: chr27:15926002-15925767 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 35

Conread position: 325-703
Cow position: chr27:22797732-22797359 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 9

Conread position: 326-703
Cow position: chr27:8200863-8201235 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 34

Conread position: 349-623
Cow position: chr27:3994360-3994089 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 195
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 103, 52

Conread position: 354-577
Cow position: chr27:219851-219637 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 167
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 98, 47

Conread position: 355-631
Cow position: chr27:526147-525871 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 56

Conread position: 355-698
Cow position: chr27:4768386-4768730 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 46

Conread position: 364-703
Cow position: chr27:344963-344630 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 38

Conread position: 377-703
Cow position: chr27:19424405-19424077 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 25

Conread position: 379-703
Cow position: chr27:30307293-30306969 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 32

Conread position: 381-703
Cow position: chr27:11480908-11481231 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 20

Conread position: 385-543
Cow position: chr27:2681302-2681459 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 125
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 67, 17

Conread position: 388-703
Cow position: chr27:14380305-14380604 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 14

Conread position: 394-701
Cow position: chr27:12281688-12281988 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 217
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 200, 8

Conread position: 401-703
Cow position: chr27:3653703-3653400 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 0

Show alignments to all cow chromosomes.