Cow genome map

Conread name: Ova1-OVRM10224H10

Conread position: 1-231
Cow position: chr3:3525546-3525785 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 181
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 87, 17

Conread position: 1-242
Cow position: chr3:26298498-26298248 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 193
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 45, 17

Conread position: 1-242
Cow position: chr3:34504829-34504579 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 191
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 86, 17

Conread position: 1-246
Cow position: chr3:29328764-29328510 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 192
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 87, 17

Conread position: 1-329
Cow position: chr3:36614740-36614399 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-344
Cow position: chr3:13036208-13036564 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 17

Conread position: 1-453
Cow position: chr3:59864073-59864533 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 18

Conread position: 1-468
Cow position: chr3:34458348-34457871 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-542
Cow position: chr3:34014860-34015411 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-550
Cow position: chr3:12664451-12665010 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-569
Cow position: chr3:9404707-9404138 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 14

Conread position: 1-583
Cow position: chr3:32413171-32412578 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-584
Cow position: chr3:72389480-72390068 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 373

Conread position: 1-703
Cow position: chr3:596639-597338 (view UCSC Genome Browser custom track)
Alignm length: 723
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 16

Conread position: 1-703
Cow position: chr3:2920765-2921488 (view UCSC Genome Browser custom track)
Alignm length: 737
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-703
Cow position: chr3:6713527-6714238 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 16

Conread position: 1-703
Cow position: chr3:13724193-13723481 (view UCSC Genome Browser custom track)
Alignm length: 723
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 17

Conread position: 1-703
Cow position: chr3:19882994-19883699 (view UCSC Genome Browser custom track)
Alignm length: 723
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 17

Conread position: 1-703
Cow position: chr3:24264720-24265429 (view UCSC Genome Browser custom track)
Alignm length: 723
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 17

Conread position: 1-703
Cow position: chr3:30320782-30321487 (view UCSC Genome Browser custom track)
Alignm length: 726
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 18

Conread position: 1-703
Cow position: chr3:30616419-30615710 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 17

Conread position: 1-703
Cow position: chr3:35611672-35612377 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-703
Cow position: chr3:43526214-43525508 (view UCSC Genome Browser custom track)
Alignm length: 716
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 17

Conread position: 1-703
Cow position: chr3:49563528-49564247 (view UCSC Genome Browser custom track)
Alignm length: 728
Alignm identity: 548
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-703
Cow position: chr3:49998656-49999367 (view UCSC Genome Browser custom track)
Alignm length: 721
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 17

Conread position: 1-703
Cow position: chr3:57482205-57481506 (view UCSC Genome Browser custom track)
Alignm length: 719
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 17

Conread position: 1-703
Cow position: chr3:64653185-64653899 (view UCSC Genome Browser custom track)
Alignm length: 724
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 17

Conread position: 1-703
Cow position: chr3:68890053-68889341 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 17

Conread position: 1-703
Cow position: chr3:78024914-78024205 (view UCSC Genome Browser custom track)
Alignm length: 725
Alignm identity: 547
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 22

Conread position: 1-703
Cow position: chr3:83766771-83767476 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-706
Cow position: chr3:63149119-63148409 (view UCSC Genome Browser custom track)
Alignm length: 726
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 87

Conread position: 4-178
Cow position: chr3:82706784-82706601 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 146
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 56, 33

Conread position: 5-703
Cow position: chr3:18861961-18862671 (view UCSC Genome Browser custom track)
Alignm length: 718
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 122

Conread position: 9-645
Cow position: chr3:1482556-1483202 (view UCSC Genome Browser custom track)
Alignm length: 655
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 15

Conread position: 13-703
Cow position: chr3:61277119-61277797 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 184

Conread position: 14-206
Cow position: chr3:33635937-33636138 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 154
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 66, 0

Conread position: 14-211
Cow position: chr3:63278106-63277899 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 154
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 66, 0

Conread position: 14-218
Cow position: chr3:54655297-54655510 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 165
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 25, 145

Conread position: 14-235
Cow position: chr3:58036055-58036289 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 180
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 74, 0

Conread position: 14-274
Cow position: chr3:64735971-64735702 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 195
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 78, 166

Conread position: 14-298
Cow position: chr3:40005362-40005069 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 14-300
Cow position: chr3:38529235-38528940 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 14-341
Cow position: chr3:63689718-63689375 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 14-344
Cow position: chr3:81980000-81979658 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 204

Conread position: 14-412
Cow position: chr3:69963273-69962876 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 70

Conread position: 14-434
Cow position: chr3:35972639-35973063 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 84

Conread position: 14-441
Cow position: chr3:49453528-49453961 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 35

Conread position: 14-510
Cow position: chr3:18461594-18461099 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 44

Conread position: 14-559
Cow position: chr3:15987514-15988073 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 56

Conread position: 14-579
Cow position: chr3:79592669-79593251 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 356

Conread position: 14-702
Cow position: chr3:24573632-24572937 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 259

Conread position: 14-703
Cow position: chr3:21004343-21005043 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 40

Conread position: 14-703
Cow position: chr3:24637938-24638647 (view UCSC Genome Browser custom track)
Alignm length: 716
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 189

Conread position: 14-703
Cow position: chr3:31121617-31120906 (view UCSC Genome Browser custom track)
Alignm length: 716
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 353

Conread position: 14-703
Cow position: chr3:45185438-45184756 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 138

Conread position: 14-703
Cow position: chr3:45977029-45977730 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 355

Conread position: 14-703
Cow position: chr3:48239785-48240484 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 56

Conread position: 14-703
Cow position: chr3:49542674-49541977 (view UCSC Genome Browser custom track)
Alignm length: 716
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 358

Conread position: 14-703
Cow position: chr3:53048252-53047561 (view UCSC Genome Browser custom track)
Alignm length: 714
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 38

Conread position: 14-703
Cow position: chr3:56147834-56148526 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 74

Conread position: 14-703
Cow position: chr3:57742053-57742743 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 182

Conread position: 14-703
Cow position: chr3:72670028-72669329 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 195

Conread position: 14-706
Cow position: chr3:25689180-25689887 (view UCSC Genome Browser custom track)
Alignm length: 716
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 355

Conread position: 14-707
Cow position: chr3:66969353-66968643 (view UCSC Genome Browser custom track)
Alignm length: 715
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 354

Conread position: 14-708
Cow position: chr3:16294375-16293675 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 355

Conread position: 14-712
Cow position: chr3:3653754-3653048 (view UCSC Genome Browser custom track)
Alignm length: 716
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 152

Conread position: 14-712
Cow position: chr3:63000833-63000132 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 36

Conread position: 15-344
Cow position: chr3:6784936-6785282 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 319

Conread position: 15-379
Cow position: chr3:48525276-48525647 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 22

Conread position: 15-472
Cow position: chr3:14862732-14863218 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 171

Conread position: 15-516
Cow position: chr3:5886025-5886542 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 359

Conread position: 15-523
Cow position: chr3:27920976-27921501 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 175

Conread position: 15-533
Cow position: chr3:41082691-41083223 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 351

Conread position: 15-592
Cow position: chr3:41208067-41207477 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 27

Conread position: 15-623
Cow position: chr3:42748195-42747571 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 358

Conread position: 15-650
Cow position: chr3:77581147-77581775 (view UCSC Genome Browser custom track)
Alignm length: 652
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 184

Conread position: 15-654
Cow position: chr3:48845534-48846187 (view UCSC Genome Browser custom track)
Alignm length: 658
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 347

Conread position: 15-679
Cow position: chr3:65177538-65178216 (view UCSC Genome Browser custom track)
Alignm length: 683
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 346

Conread position: 15-703
Cow position: chr3:7246575-7245875 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 188

Conread position: 15-703
Cow position: chr3:15415994-15416697 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 357

Conread position: 15-703
Cow position: chr3:19798624-19797921 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 352

Conread position: 15-703
Cow position: chr3:20380189-20379488 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 352

Conread position: 15-703
Cow position: chr3:22338436-22339139 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 352

Conread position: 15-703
Cow position: chr3:29574592-29573895 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 172

Conread position: 15-703
Cow position: chr3:31021211-31021913 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 355

Conread position: 15-703
Cow position: chr3:40337615-40336915 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 352

Conread position: 15-703
Cow position: chr3:44926350-44927044 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 145

Conread position: 15-703
Cow position: chr3:46858756-46858053 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 353

Conread position: 15-703
Cow position: chr3:49908484-49907802 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 237

Conread position: 15-703
Cow position: chr3:56296912-56297615 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 351

Conread position: 15-703
Cow position: chr3:56485732-56485029 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 357

Conread position: 15-703
Cow position: chr3:66888668-66887967 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 351

Conread position: 15-703
Cow position: chr3:68697439-68696735 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 354

Conread position: 15-703
Cow position: chr3:68718178-68717479 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 194

Conread position: 15-703
Cow position: chr3:68871222-68870519 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 348

Conread position: 15-703
Cow position: chr3:74060005-74060700 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 349

Conread position: 15-707
Cow position: chr3:16225409-16226111 (view UCSC Genome Browser custom track)
Alignm length: 713
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 272

Conread position: 15-707
Cow position: chr3:32620513-32619811 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 352

Conread position: 16-703
Cow position: chr3:56645802-56645100 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 352

Conread position: 18-298
Cow position: chr3:53389118-53388838 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 207
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 67, 164

Conread position: 18-393
Cow position: chr3:34028393-34028017 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 75

Conread position: 18-412
Cow position: chr3:35619117-35619523 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 349

Conread position: 18-430
Cow position: chr3:12666772-12667194 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 235

Conread position: 18-548
Cow position: chr3:19795667-19795147 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 110

Conread position: 18-633
Cow position: chr3:26595574-26596201 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 338

Conread position: 18-636
Cow position: chr3:6875728-6875117 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 8

Conread position: 18-637
Cow position: chr3:14452190-14452823 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 103

Conread position: 18-703
Cow position: chr3:2708339-2707643 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 355

Conread position: 18-703
Cow position: chr3:4030284-4030973 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 21

Conread position: 18-703
Cow position: chr3:7477391-7476690 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 355

Conread position: 18-703
Cow position: chr3:10243192-10243890 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 354

Conread position: 18-703
Cow position: chr3:13276745-13276051 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 61

Conread position: 18-703
Cow position: chr3:18814038-18814737 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 150

Conread position: 18-703
Cow position: chr3:19946774-19947435 (view UCSC Genome Browser custom track)
Alignm length: 699
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 70

Conread position: 18-703
Cow position: chr3:21179710-21179028 (view UCSC Genome Browser custom track)
Alignm length: 696
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 65

Conread position: 18-703
Cow position: chr3:22725238-22724541 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 345

Conread position: 18-703
Cow position: chr3:24443563-24442872 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 354

Conread position: 18-703
Cow position: chr3:40825929-40826627 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 52

Conread position: 18-703
Cow position: chr3:47079082-47078382 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 55

Conread position: 18-703
Cow position: chr3:48602784-48603483 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 27

Conread position: 18-703
Cow position: chr3:49135027-49134306 (view UCSC Genome Browser custom track)
Alignm length: 723
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 418

Conread position: 18-703
Cow position: chr3:66622747-66623442 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 56

Conread position: 18-703
Cow position: chr3:69931302-69930605 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 100

Conread position: 18-703
Cow position: chr3:72632600-72633304 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 355

Conread position: 18-703
Cow position: chr3:75039314-75038611 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 357

Conread position: 18-703
Cow position: chr3:81100617-81101309 (view UCSC Genome Browser custom track)
Alignm length: 700
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 281

Conread position: 18-707
Cow position: chr3:23009923-23010586 (view UCSC Genome Browser custom track)
Alignm length: 700
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 57

Conread position: 18-712
Cow position: chr3:74848616-74847932 (view UCSC Genome Browser custom track)
Alignm length: 713
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 11

Conread position: 19-650
Cow position: chr3:12677085-12676464 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 181

Conread position: 19-682
Cow position: chr3:49335733-49336405 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 268

Conread position: 20-592
Cow position: chr3:56152842-56153419 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 387
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 63, 14

Conread position: 21-238
Cow position: chr3:49734330-49734547 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 169
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 78, 62

Conread position: 21-258
Cow position: chr3:944214-944462 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 171
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 55, 180

Conread position: 21-344
Cow position: chr3:19719001-19718668 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 231
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 68, 199

Conread position: 21-510
Cow position: chr3:55894362-55894861 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 124

Conread position: 21-522
Cow position: chr3:36402132-36402654 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 30

Conread position: 21-578
Cow position: chr3:69421924-69421363 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 114

Conread position: 21-602
Cow position: chr3:29643901-29644494 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 34

Conread position: 21-645
Cow position: chr3:12253584-12254217 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 105

Conread position: 21-645
Cow position: chr3:74850599-74849974 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 142

Conread position: 21-700
Cow position: chr3:34040064-34039381 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 233

Conread position: 21-701
Cow position: chr3:18759885-18759192 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 259

Conread position: 21-703
Cow position: chr3:23205138-23204447 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 139

Conread position: 21-703
Cow position: chr3:23287801-23287106 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 346

Conread position: 21-703
Cow position: chr3:26743337-26742642 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 344

Conread position: 21-703
Cow position: chr3:29129625-29130325 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 146

Conread position: 21-703
Cow position: chr3:36875514-36874830 (view UCSC Genome Browser custom track)
Alignm length: 700
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 78

Conread position: 21-703
Cow position: chr3:43190736-43190039 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 351

Conread position: 21-703
Cow position: chr3:45692481-45691811 (view UCSC Genome Browser custom track)
Alignm length: 697
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 149

Conread position: 21-703
Cow position: chr3:46505302-46505999 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 346

Conread position: 21-703
Cow position: chr3:49611674-49610976 (view UCSC Genome Browser custom track)
Alignm length: 703
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 348

Conread position: 21-703
Cow position: chr3:52689303-52689981 (view UCSC Genome Browser custom track)
Alignm length: 696
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 55

Conread position: 21-703
Cow position: chr3:53880733-53880036 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 346

Conread position: 21-703
Cow position: chr3:54087819-54087135 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 218

Conread position: 21-703
Cow position: chr3:56337418-56336728 (view UCSC Genome Browser custom track)
Alignm length: 700
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 344

Conread position: 21-703
Cow position: chr3:76001419-76000731 (view UCSC Genome Browser custom track)
Alignm length: 699
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 344

Conread position: 21-712
Cow position: chr3:3060399-3061092 (view UCSC Genome Browser custom track)
Alignm length: 715
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 254

Conread position: 21-712
Cow position: chr3:82931169-82931868 (view UCSC Genome Browser custom track)
Alignm length: 717
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 253

Conread position: 22-712
Cow position: chr3:63239479-63238790 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 342

Conread position: 22-712
Cow position: chr3:77426262-77426925 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 35

Conread position: 23-413
Cow position: chr3:82888543-82888936 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 269
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 67, 37

Conread position: 23-703
Cow position: chr3:27783744-27783079 (view UCSC Genome Browser custom track)
Alignm length: 697
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 44

Conread position: 24-638
Cow position: chr3:67546050-67545436 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 335

Conread position: 24-703
Cow position: chr3:38869116-38869797 (view UCSC Genome Browser custom track)
Alignm length: 694
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 35

Conread position: 24-703
Cow position: chr3:50920573-50921270 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 169

Conread position: 25-591
Cow position: chr3:62881904-62882479 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 50

Conread position: 26-622
Cow position: chr3:11182408-11181809 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 116

Conread position: 30-344
Cow position: chr3:19214893-19215227 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 88

Conread position: 30-383
Cow position: chr3:50204089-50204456 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 35

Conread position: 30-637
Cow position: chr3:42994337-42993712 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 110

Conread position: 30-693
Cow position: chr3:227321-226666 (view UCSC Genome Browser custom track)
Alignm length: 686
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 10

Conread position: 30-703
Cow position: chr3:6896389-6897057 (view UCSC Genome Browser custom track)
Alignm length: 692
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 99

Conread position: 30-703
Cow position: chr3:37971587-37972265 (view UCSC Genome Browser custom track)
Alignm length: 693
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 303

Conread position: 31-184
Cow position: chr3:14053541-14053703 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 130
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 57, 0

Conread position: 34-703
Cow position: chr3:31418079-31418764 (view UCSC Genome Browser custom track)
Alignm length: 698
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 254

Conread position: 36-211
Cow position: chr3:34116972-34116788 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 48, 148

Conread position: 36-708
Cow position: chr3:38251414-38252084 (view UCSC Genome Browser custom track)
Alignm length: 694
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 146

Conread position: 39-624
Cow position: chr3:21026855-21026256 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 178

Conread position: 39-703
Cow position: chr3:39556028-39555356 (view UCSC Genome Browser custom track)
Alignm length: 681
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 246

Conread position: 41-710
Cow position: chr3:34087637-34086961 (view UCSC Genome Browser custom track)
Alignm length: 690
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 138

Conread position: 44-703
Cow position: chr3:6864224-6864889 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 328

Conread position: 45-703
Cow position: chr3:1033420-1034093 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 327

Conread position: 46-703
Cow position: chr3:5474119-5474770 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 170

Conread position: 63-703
Cow position: chr3:27246111-27245464 (view UCSC Genome Browser custom track)
Alignm length: 660
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 200

Conread position: 64-407
Cow position: chr3:33470315-33469967 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 245
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 42, 111

Conread position: 64-412
Cow position: chr3:4162386-4162013 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 319

Conread position: 64-492
Cow position: chr3:20889065-20888635 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 143

Conread position: 64-703
Cow position: chr3:40285739-40285085 (view UCSC Genome Browser custom track)
Alignm length: 659
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 303

Conread position: 67-528
Cow position: chr3:36594418-36594878 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 7

Conread position: 67-707
Cow position: chr3:32837938-32838587 (view UCSC Genome Browser custom track)
Alignm length: 660
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 17

Conread position: 81-633
Cow position: chr3:5497834-5497279 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 281

Conread position: 81-710
Cow position: chr3:17938398-17937774 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 25

Conread position: 84-573
Cow position: chr3:32326818-32326326 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 286

Conread position: 84-703
Cow position: chr3:19941498-19942122 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 198

Conread position: 84-706
Cow position: chr3:19108171-19108791 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 182

Conread position: 86-702
Cow position: chr3:15656680-15656081 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 273

Conread position: 87-408
Cow position: chr3:50124388-50124074 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 239
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 15, 99

Conread position: 87-427
Cow position: chr3:6441271-6441616 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 268

Conread position: 87-429
Cow position: chr3:36120492-36120839 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 277

Conread position: 87-478
Cow position: chr3:2868152-2867756 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 272

Conread position: 87-522
Cow position: chr3:34347472-34347031 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 277

Conread position: 87-633
Cow position: chr3:11510235-11509688 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 218

Conread position: 87-643
Cow position: chr3:59332067-59332629 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 94

Conread position: 87-644
Cow position: chr3:66651710-66651168 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 26

Conread position: 87-665
Cow position: chr3:32220349-32220917 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 89

Conread position: 87-703
Cow position: chr3:61677155-61677766 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 41

Conread position: 87-712
Cow position: chr3:34504515-34503888 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 277

Conread position: 87-712
Cow position: chr3:40048497-40049134 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 277

Conread position: 88-412
Cow position: chr3:36517032-36516704 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 233
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 14, 113

Conread position: 88-706
Cow position: chr3:57554378-57555009 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 268

Conread position: 95-703
Cow position: chr3:49463936-49463329 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 258

Conread position: 101-703
Cow position: chr3:24586609-24586000 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 157

Conread position: 101-712
Cow position: chr3:50460972-50461562 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 147

Conread position: 102-592
Cow position: chr3:20781786-20781315 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 82

Conread position: 102-703
Cow position: chr3:48361571-48362168 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 151

Conread position: 105-352
Cow position: chr3:63201672-63201906 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 170
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 105-592
Cow position: chr3:26751543-26751062 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 15

Conread position: 105-592
Cow position: chr3:27222682-27223166 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 315
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 114, 13

Conread position: 105-707
Cow position: chr3:83290309-83289716 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 81

Conread position: 107-706
Cow position: chr3:14467248-14466628 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 97

Conread position: 108-703
Cow position: chr3:33326012-33326617 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 92

Conread position: 112-393
Cow position: chr3:39855865-39856150 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 44

Conread position: 112-399
Cow position: chr3:31396032-31396322 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 242

Conread position: 116-706
Cow position: chr3:6837687-6838262 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 186

Conread position: 120-643
Cow position: chr3:56719684-56719155 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 135

Conread position: 121-362
Cow position: chr3:48210852-48211098 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 172
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 52, 121

Conread position: 128-627
Cow position: chr3:51489971-51490457 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 16

Conread position: 129-703
Cow position: chr3:37280046-37280626 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 234

Conread position: 133-557
Cow position: chr3:10370656-10371078 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 221

Conread position: 133-703
Cow position: chr3:19754073-19753504 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 230

Conread position: 139-587
Cow position: chr3:56100940-56101379 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 23

Conread position: 146-703
Cow position: chr3:27866327-27866893 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 177

Conread position: 153-592
Cow position: chr3:41314754-41315195 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 11

Conread position: 157-544
Cow position: chr3:53518515-53518907 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 206

Conread position: 159-501
Cow position: chr3:80817297-80817651 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 230
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 59, 259

Conread position: 160-624
Cow position: chr3:77706508-77706979 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 198

Conread position: 163-584
Cow position: chr3:58128744-58129161 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 295
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 55, 26

Conread position: 165-616
Cow position: chr3:522808-523252 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 216

Conread position: 167-703
Cow position: chr3:49605750-49605211 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 196

Conread position: 168-706
Cow position: chr3:64170922-64171480 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 33

Conread position: 171-472
Cow position: chr3:62794580-62794272 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 216
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 47, 197

Conread position: 174-703
Cow position: chr3:2866959-2866424 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 184

Conread position: 174-708
Cow position: chr3:14053969-14054508 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 189

Conread position: 175-703
Cow position: chr3:58208154-58207625 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 351
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 43, 69

Conread position: 178-645
Cow position: chr3:54568734-54569200 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 8

Conread position: 178-703
Cow position: chr3:1740172-1739642 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 91

Conread position: 179-703
Cow position: chr3:58950161-58950692 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 174

Conread position: 180-703
Cow position: chr3:76864133-76864662 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 183

Conread position: 182-699
Cow position: chr3:45567914-45568458 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 176

Conread position: 182-703
Cow position: chr3:38095603-38096131 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 90

Conread position: 184-703
Cow position: chr3:32491007-32490482 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 179

Conread position: 184-712
Cow position: chr3:26992835-26993370 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 16

Conread position: 193-699
Cow position: chr3:57455687-57456185 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 139

Conread position: 195-554
Cow position: chr3:2852764-2852393 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 47

Conread position: 201-680
Cow position: chr3:63277130-63276656 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 69

Conread position: 203-703
Cow position: chr3:21593009-21593515 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 155

Conread position: 205-643
Cow position: chr3:50112291-50111855 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 293
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 13, 55

Conread position: 205-703
Cow position: chr3:31934606-31934107 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 146

Conread position: 205-703
Cow position: chr3:61173224-61173726 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 75

Conread position: 205-703
Cow position: chr3:63736119-63736618 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 144

Conread position: 219-703
Cow position: chr3:54654436-54653944 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 188

Conread position: 221-407
Cow position: chr3:21103047-21102860 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 60, 8

Conread position: 221-591
Cow position: chr3:53413783-53414150 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 257
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 79, 128

Conread position: 221-592
Cow position: chr3:49253260-49253631 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 185

Conread position: 221-712
Cow position: chr3:58034898-58034397 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 145

Conread position: 222-487
Cow position: chr3:55245087-55245353 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 197
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 78, 137

Conread position: 225-652
Cow position: chr3:46224649-46225074 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 131

Conread position: 225-712
Cow position: chr3:3837834-3837351 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 134

Conread position: 226-703
Cow position: chr3:65988671-65989151 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 137

Conread position: 227-415
Cow position: chr3:65084144-65084332 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 137
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 71, 132

Conread position: 237-712
Cow position: chr3:37627658-37628131 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 116

Conread position: 240-703
Cow position: chr3:2366124-2365671 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 114

Conread position: 240-712
Cow position: chr3:60178325-60177855 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 36

Conread position: 241-703
Cow position: chr3:5951849-5951385 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 118

Conread position: 243-628
Cow position: chr3:14881753-14881367 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 255
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 63, 125

Conread position: 244-592
Cow position: chr3:77273022-77272676 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 106

Conread position: 244-712
Cow position: chr3:2904669-2904207 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 111

Conread position: 245-703
Cow position: chr3:37893604-37894062 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 114

Conread position: 250-689
Cow position: chr3:5446136-5445700 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 109

Conread position: 250-712
Cow position: chr3:68510560-68510093 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 104

Conread position: 253-702
Cow position: chr3:7856203-7856652 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 107

Conread position: 253-703
Cow position: chr3:42977805-42977361 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 101

Conread position: 255-703
Cow position: chr3:64376927-64376480 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 29

Conread position: 256-645
Cow position: chr3:40344020-40344406 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 89

Conread position: 256-703
Cow position: chr3:18886247-18886688 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 94

Conread position: 267-703
Cow position: chr3:19880844-19881280 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 87

Conread position: 268-712
Cow position: chr3:3552118-3552562 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 91

Conread position: 271-703
Cow position: chr3:47273078-47272648 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 30

Conread position: 282-664
Cow position: chr3:28093944-28094329 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 72

Conread position: 283-701
Cow position: chr3:2790560-2790980 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 79

Conread position: 285-703
Cow position: chr3:66830127-66829708 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 35

Conread position: 286-703
Cow position: chr3:14679903-14680318 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 60

Conread position: 293-703
Cow position: chr3:28435876-28435468 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 57

Conread position: 295-703
Cow position: chr3:6528817-6529223 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 60

Conread position: 299-703
Cow position: chr3:12798222-12797831 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 47

Conread position: 300-541
Cow position: chr3:64025489-64025249 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 184
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 152, 50

Conread position: 300-570
Cow position: chr3:50941403-50941670 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 52

Conread position: 300-642
Cow position: chr3:944525-944861 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 53

Conread position: 300-703
Cow position: chr3:2572357-2572758 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 55

Conread position: 300-703
Cow position: chr3:2834709-2834308 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 50

Conread position: 300-703
Cow position: chr3:7155977-7155576 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 53

Conread position: 300-703
Cow position: chr3:20795123-20795524 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 46

Conread position: 300-703
Cow position: chr3:35342480-35342881 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 55

Conread position: 300-712
Cow position: chr3:55373920-55374321 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 55

Conread position: 301-703
Cow position: chr3:14284565-14284964 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 51

Conread position: 301-703
Cow position: chr3:32703328-32702945 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 274
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 271, 45

Conread position: 302-703
Cow position: chr3:76187364-76187769 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 48

Conread position: 304-703
Cow position: chr3:823257-822859 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 46

Conread position: 304-712
Cow position: chr3:43084076-43084485 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 51

Conread position: 309-645
Cow position: chr3:24530541-24530874 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 231
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 143, 40

Conread position: 313-547
Cow position: chr3:36614385-36614155 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 174
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 139, 19

Conread position: 313-671
Cow position: chr3:654915-654556 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 235
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 46, 76

Conread position: 314-501
Cow position: chr3:57835747-57835563 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 138, 36

Conread position: 314-560
Cow position: chr3:49429624-49429865 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 178
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 138, 39

Conread position: 314-654
Cow position: chr3:12987172-12986834 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 41

Conread position: 314-703
Cow position: chr3:33269082-33269457 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 41

Conread position: 314-703
Cow position: chr3:42846197-42846575 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 314-703
Cow position: chr3:64317584-64317981 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 41

Conread position: 314-703
Cow position: chr3:77225579-77225964 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 27

Conread position: 316-645
Cow position: chr3:20603006-20602684 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 233
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 136, 39

Conread position: 317-702
Cow position: chr3:73636728-73637110 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 28

Conread position: 317-703
Cow position: chr3:35885268-35884890 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 39

Conread position: 318-703
Cow position: chr3:3983960-3984335 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 28

Conread position: 321-544
Cow position: chr3:53388750-53388528 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 164
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 138, 18

Conread position: 321-568
Cow position: chr3:60142871-60143110 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 178
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 131, 32

Conread position: 321-703
Cow position: chr3:52150435-52150055 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 34

Conread position: 333-712
Cow position: chr3:45311656-45312024 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 14

Conread position: 334-703
Cow position: chr3:11384173-11384547 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 71

Conread position: 337-591
Cow position: chr3:68402815-68402558 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 177
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 17, 7

Conread position: 349-631
Cow position: chr3:21016911-21016640 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 195
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 20, 53

Conread position: 352-697
Cow position: chr3:34027998-34027650 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 52

Conread position: 354-703
Cow position: chr3:52664281-52664626 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 236
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 58, 119

Conread position: 354-706
Cow position: chr3:78519927-78520280 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 58

Conread position: 354-708
Cow position: chr3:63202131-63202473 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 249
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 98, 10

Conread position: 355-588
Cow position: chr3:29578753-29578519 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 46

Conread position: 355-627
Cow position: chr3:52451298-52451570 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 191
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 140, 56

Conread position: 355-703
Cow position: chr3:40521058-40520709 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 46

Conread position: 355-706
Cow position: chr3:30938382-30938730 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 46

Conread position: 360-703
Cow position: chr3:63689003-63688681 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 246
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 114, 42

Conread position: 360-711
Cow position: chr3:44100935-44101293 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 11

Conread position: 362-703
Cow position: chr3:65473319-65473660 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 35

Conread position: 368-703
Cow position: chr3:13312111-13311773 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 43

Conread position: 369-703
Cow position: chr3:11417442-11417777 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 33

Conread position: 369-703
Cow position: chr3:39856359-39856694 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 32

Conread position: 373-712
Cow position: chr3:13115536-13115197 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 38

Conread position: 389-712
Cow position: chr3:48272695-48273024 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 13

Conread position: 391-712
Cow position: chr3:31224197-31224521 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 21

Conread position: 401-712
Cow position: chr3:302158-302466 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 250

Conread position: 402-707
Cow position: chr3:38862663-38862957 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 213
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 50, 72

Conread position: 403-703
Cow position: chr3:41019385-41019083 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 406-705
Cow position: chr3:39327480-39327778 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 216

Conread position: 421-703
Cow position: chr3:36671674-36671387 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 421-703
Cow position: chr3:65084881-65085165 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 421-703
Cow position: chr3:77466640-77466916 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 200
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 31, 63

Conread position: 423-545
Cow position: chr3:22281522-22281399 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 55

Conread position: 423-703
Cow position: chr3:27454984-27454702 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 459-712
Cow position: chr3:19718273-19718023 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 185
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 113, 59

Show alignments to all cow chromosomes.