Cow genome map

Conread name: Ova1-OVRM10224H10

Conread position: 1-181
Cow position: chr6:5750494-5750679 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 86, 17

Conread position: 1-189
Cow position: chr6:39349955-39350148 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 148
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 86, 17

Conread position: 1-260
Cow position: chr6:26325864-26325597 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 205
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 86, 17

Conread position: 1-274
Cow position: chr6:28186271-28185989 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-279
Cow position: chr6:13367641-13367928 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 216
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 86, 17

Conread position: 1-305
Cow position: chr6:31813435-31813122 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 201
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 86, 17

Conread position: 1-309
Cow position: chr6:58390776-58390461 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 206
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 86, 17

Conread position: 1-322
Cow position: chr6:46296835-46297169 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-344
Cow position: chr6:33810353-33810709 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-356
Cow position: chr6:27527424-27527058 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 17

Conread position: 1-376
Cow position: chr6:28400688-28400304 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-429
Cow position: chr6:28702147-28701703 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-438
Cow position: chr6:2377266-2377712 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 17

Conread position: 1-453
Cow position: chr6:14133181-14132720 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-463
Cow position: chr6:35967904-35967432 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-480
Cow position: chr6:12971355-12970871 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-533
Cow position: chr6:41389890-41389352 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-568
Cow position: chr6:45591111-45591687 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-592
Cow position: chr6:62577620-62577018 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-628
Cow position: chr6:34129019-34129657 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-628
Cow position: chr6:58952558-58951924 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 16

Conread position: 1-703
Cow position: chr6:1507945-1507235 (view UCSC Genome Browser custom track)
Alignm length: 719
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-703
Cow position: chr6:10043777-10044490 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-703
Cow position: chr6:11019219-11019933 (view UCSC Genome Browser custom track)
Alignm length: 723
Alignm identity: 546
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-703
Cow position: chr6:20351527-20350814 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-703
Cow position: chr6:22738135-22737431 (view UCSC Genome Browser custom track)
Alignm length: 723
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 17

Conread position: 1-703
Cow position: chr6:25375529-25374833 (view UCSC Genome Browser custom track)
Alignm length: 725
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-703
Cow position: chr6:26772559-26771846 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 17

Conread position: 1-703
Cow position: chr6:27151878-27151166 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-703
Cow position: chr6:27474976-27475681 (view UCSC Genome Browser custom track)
Alignm length: 721
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 17

Conread position: 1-703
Cow position: chr6:28001818-28001121 (view UCSC Genome Browser custom track)
Alignm length: 725
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 17

Conread position: 1-703
Cow position: chr6:28489003-28488303 (view UCSC Genome Browser custom track)
Alignm length: 719
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 17

Conread position: 1-703
Cow position: chr6:38874096-38873386 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 17

Conread position: 1-703
Cow position: chr6:40277630-40278334 (view UCSC Genome Browser custom track)
Alignm length: 714
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 17

Conread position: 1-703
Cow position: chr6:41231051-41231763 (view UCSC Genome Browser custom track)
Alignm length: 723
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 17

Conread position: 1-703
Cow position: chr6:51149504-51150217 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 17

Conread position: 1-703
Cow position: chr6:51717108-51717829 (view UCSC Genome Browser custom track)
Alignm length: 732
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 17

Conread position: 1-703
Cow position: chr6:68029739-68030454 (view UCSC Genome Browser custom track)
Alignm length: 724
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 17

Conread position: 1-706
Cow position: chr6:19104347-19103631 (view UCSC Genome Browser custom track)
Alignm length: 726
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 17

Conread position: 1-706
Cow position: chr6:62664338-62665052 (view UCSC Genome Browser custom track)
Alignm length: 725
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 11

Conread position: 1-707
Cow position: chr6:2876469-2875753 (view UCSC Genome Browser custom track)
Alignm length: 728
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 17

Conread position: 1-707
Cow position: chr6:28064553-28065271 (view UCSC Genome Browser custom track)
Alignm length: 728
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 16

Conread position: 1-712
Cow position: chr6:127570-126845 (view UCSC Genome Browser custom track)
Alignm length: 734
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-712
Cow position: chr6:19713668-19712955 (view UCSC Genome Browser custom track)
Alignm length: 732
Alignm identity: 546
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 17

Conread position: 1-712
Cow position: chr6:53936064-53935348 (view UCSC Genome Browser custom track)
Alignm length: 733
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 17

Conread position: 2-703
Cow position: chr6:65820019-65819307 (view UCSC Genome Browser custom track)
Alignm length: 724
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 16

Conread position: 9-703
Cow position: chr6:9738699-9737979 (view UCSC Genome Browser custom track)
Alignm length: 726
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 375

Conread position: 9-703
Cow position: chr6:56452529-56451820 (view UCSC Genome Browser custom track)
Alignm length: 714
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 358

Conread position: 13-701
Cow position: chr6:16767264-16766569 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 333

Conread position: 13-703
Cow position: chr6:16592539-16593225 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 114

Conread position: 14-372
Cow position: chr6:50112674-50113018 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 42

Conread position: 14-394
Cow position: chr6:39435350-39434953 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 358

Conread position: 14-428
Cow position: chr6:225334-224915 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 20

Conread position: 14-523
Cow position: chr6:14264406-14264930 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 26

Conread position: 14-529
Cow position: chr6:51876401-51876924 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 134

Conread position: 14-666
Cow position: chr6:43791001-43790338 (view UCSC Genome Browser custom track)
Alignm length: 673
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 19

Conread position: 14-680
Cow position: chr6:8536722-8536043 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 185

Conread position: 14-703
Cow position: chr6:16704157-16703463 (view UCSC Genome Browser custom track)
Alignm length: 713
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 346

Conread position: 14-703
Cow position: chr6:21833076-21832386 (view UCSC Genome Browser custom track)
Alignm length: 700
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 114

Conread position: 14-703
Cow position: chr6:28103291-28102594 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 46

Conread position: 14-703
Cow position: chr6:42266307-42267008 (view UCSC Genome Browser custom track)
Alignm length: 715
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 356

Conread position: 14-703
Cow position: chr6:50570773-50571466 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 287

Conread position: 14-703
Cow position: chr6:59595824-59596516 (view UCSC Genome Browser custom track)
Alignm length: 720
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 365

Conread position: 14-703
Cow position: chr6:64718894-64719593 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 45

Conread position: 14-707
Cow position: chr6:33950595-33949879 (view UCSC Genome Browser custom track)
Alignm length: 733
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 145

Conread position: 14-711
Cow position: chr6:3573356-3574075 (view UCSC Genome Browser custom track)
Alignm length: 734
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 61

Conread position: 14-712
Cow position: chr6:25358314-25357577 (view UCSC Genome Browser custom track)
Alignm length: 743
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 206

Conread position: 15-274
Cow position: chr6:18912902-18912630 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 205
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 31, 26

Conread position: 15-279
Cow position: chr6:13979335-13979612 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 15-331
Cow position: chr6:28135507-28135839 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 237
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 73, 20

Conread position: 15-344
Cow position: chr6:65905722-65905379 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 15-394
Cow position: chr6:13849647-13850037 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 251

Conread position: 15-654
Cow position: chr6:17595713-17595059 (view UCSC Genome Browser custom track)
Alignm length: 660
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 26

Conread position: 15-703
Cow position: chr6:328787-328088 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 354

Conread position: 15-703
Cow position: chr6:7138763-7138067 (view UCSC Genome Browser custom track)
Alignm length: 703
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 347

Conread position: 15-703
Cow position: chr6:7468079-7467375 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 349

Conread position: 15-703
Cow position: chr6:11870359-11869659 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 349

Conread position: 15-703
Cow position: chr6:12663741-12663040 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 44

Conread position: 15-703
Cow position: chr6:13308813-13308123 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 352

Conread position: 15-703
Cow position: chr6:14928033-14928734 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 350

Conread position: 15-703
Cow position: chr6:16050718-16050018 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 348

Conread position: 15-703
Cow position: chr6:26668452-26667749 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 353

Conread position: 15-703
Cow position: chr6:28159991-28160684 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 60

Conread position: 15-703
Cow position: chr6:37387154-37387841 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 353

Conread position: 15-703
Cow position: chr6:39911898-39912597 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 112

Conread position: 15-703
Cow position: chr6:51867567-51868262 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 352

Conread position: 15-703
Cow position: chr6:60378735-60379438 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 357

Conread position: 16-703
Cow position: chr6:1536283-1536980 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 284

Conread position: 16-703
Cow position: chr6:5947202-5946500 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 136

Conread position: 18-218
Cow position: chr6:15277973-15277764 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 159
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 67, 0

Conread position: 18-390
Cow position: chr6:3485823-3485437 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 345

Conread position: 18-447
Cow position: chr6:35824427-35824863 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 197

Conread position: 18-450
Cow position: chr6:18986590-18987039 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 247

Conread position: 18-531
Cow position: chr6:8756242-8755715 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 349

Conread position: 18-633
Cow position: chr6:21975528-21976156 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 327

Conread position: 18-666
Cow position: chr6:48997-48334 (view UCSC Genome Browser custom track)
Alignm length: 669
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 255

Conread position: 18-680
Cow position: chr6:48875756-48875088 (view UCSC Genome Browser custom track)
Alignm length: 683
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 100

Conread position: 18-701
Cow position: chr6:20450543-20451233 (view UCSC Genome Browser custom track)
Alignm length: 699
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 301

Conread position: 18-701
Cow position: chr6:51732657-51733354 (view UCSC Genome Browser custom track)
Alignm length: 703
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 344

Conread position: 18-703
Cow position: chr6:478123-478825 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 354

Conread position: 18-703
Cow position: chr6:916620-917318 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 41

Conread position: 18-703
Cow position: chr6:3272904-3272207 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 100

Conread position: 18-703
Cow position: chr6:8204755-8205462 (view UCSC Genome Browser custom track)
Alignm length: 717
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 357

Conread position: 18-703
Cow position: chr6:9734377-9733696 (view UCSC Genome Browser custom track)
Alignm length: 697
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 69

Conread position: 18-703
Cow position: chr6:11722619-11721933 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 351

Conread position: 18-703
Cow position: chr6:15138591-15137898 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 349

Conread position: 18-703
Cow position: chr6:17120963-17121661 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 354

Conread position: 18-703
Cow position: chr6:24241866-24242562 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 349

Conread position: 18-703
Cow position: chr6:25791123-25790426 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 105

Conread position: 18-703
Cow position: chr6:28171482-28172184 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 342

Conread position: 18-703
Cow position: chr6:35874133-35873454 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 43

Conread position: 18-703
Cow position: chr6:36530862-36531549 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 33

Conread position: 18-703
Cow position: chr6:39331955-39331258 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 353

Conread position: 18-703
Cow position: chr6:43620306-43621006 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 349

Conread position: 18-703
Cow position: chr6:47040623-47039935 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 150

Conread position: 18-703
Cow position: chr6:55539694-55538996 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 249

Conread position: 18-703
Cow position: chr6:59618641-59619351 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 405

Conread position: 18-703
Cow position: chr6:60875873-60876571 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 350

Conread position: 19-545
Cow position: chr6:237289-236759 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 222

Conread position: 21-220
Cow position: chr6:62487911-62487703 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 66, 130

Conread position: 21-247
Cow position: chr6:5130739-5130507 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 162
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 70, 127

Conread position: 21-344
Cow position: chr6:52194389-52194051 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 37

Conread position: 21-365
Cow position: chr6:28845545-28845196 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 232
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 80, 136

Conread position: 21-403
Cow position: chr6:51895502-51895112 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 134

Conread position: 21-412
Cow position: chr6:24624815-24624411 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 115

Conread position: 21-553
Cow position: chr6:55901824-55902347 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 168

Conread position: 21-554
Cow position: chr6:4467189-4467741 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 55

Conread position: 21-591
Cow position: chr6:28108706-28108135 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 376
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 49, 68

Conread position: 21-592
Cow position: chr6:52696218-52696795 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 251

Conread position: 21-600
Cow position: chr6:1819219-1818628 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 168

Conread position: 21-627
Cow position: chr6:12646815-12647427 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 278

Conread position: 21-627
Cow position: chr6:25409394-25408765 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 108

Conread position: 21-642
Cow position: chr6:6720566-6721184 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 23

Conread position: 21-644
Cow position: chr6:63405384-63406018 (view UCSC Genome Browser custom track)
Alignm length: 655
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 101

Conread position: 21-664
Cow position: chr6:40974764-40975420 (view UCSC Genome Browser custom track)
Alignm length: 663
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 349

Conread position: 21-703
Cow position: chr6:3886928-3886230 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 232

Conread position: 21-703
Cow position: chr6:12628479-12629171 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 258

Conread position: 21-703
Cow position: chr6:34493256-34493950 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 106

Conread position: 21-703
Cow position: chr6:34504943-34504246 (view UCSC Genome Browser custom track)
Alignm length: 703
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 106

Conread position: 21-703
Cow position: chr6:39999878-39999184 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 256

Conread position: 21-703
Cow position: chr6:41191903-41192601 (view UCSC Genome Browser custom track)
Alignm length: 700
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 395

Conread position: 21-703
Cow position: chr6:41676517-41677204 (view UCSC Genome Browser custom track)
Alignm length: 701
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 13

Conread position: 21-703
Cow position: chr6:43186680-43187384 (view UCSC Genome Browser custom track)
Alignm length: 714
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 111

Conread position: 21-703
Cow position: chr6:43798332-43797626 (view UCSC Genome Browser custom track)
Alignm length: 713
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 25

Conread position: 21-703
Cow position: chr6:44018251-44017553 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 329

Conread position: 21-703
Cow position: chr6:50636868-50637551 (view UCSC Genome Browser custom track)
Alignm length: 701
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 330

Conread position: 21-703
Cow position: chr6:55238273-55238965 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 346

Conread position: 21-712
Cow position: chr6:43330830-43330133 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 35

Conread position: 22-681
Cow position: chr6:2580999-2581654 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 263

Conread position: 22-703
Cow position: chr6:10235788-10236470 (view UCSC Genome Browser custom track)
Alignm length: 698
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 153

Conread position: 23-550
Cow position: chr6:43778106-43778639 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 44

Conread position: 23-703
Cow position: chr6:55473903-55474581 (view UCSC Genome Browser custom track)
Alignm length: 694
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 178

Conread position: 24-556
Cow position: chr6:44096415-44096953 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 10

Conread position: 24-645
Cow position: chr6:40158923-40158300 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 162

Conread position: 24-703
Cow position: chr6:65929833-65930533 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 30

Conread position: 25-211
Cow position: chr6:46866923-46866728 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 152
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 60, 0

Conread position: 25-630
Cow position: chr6:10267504-10266889 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 330

Conread position: 29-385
Cow position: chr6:1796081-1795712 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 253

Conread position: 29-423
Cow position: chr6:34017999-34018406 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 340

Conread position: 30-712
Cow position: chr6:4904386-4903712 (view UCSC Genome Browser custom track)
Alignm length: 696
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 40

Conread position: 34-621
Cow position: chr6:50720689-50721289 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 333

Conread position: 34-703
Cow position: chr6:33465557-33466233 (view UCSC Genome Browser custom track)
Alignm length: 689
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 32

Conread position: 36-628
Cow position: chr6:37385746-37386345 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 328

Conread position: 39-703
Cow position: chr6:34844116-34843438 (view UCSC Genome Browser custom track)
Alignm length: 684
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 214

Conread position: 43-566
Cow position: chr6:3685557-3686087 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 322

Conread position: 44-703
Cow position: chr6:26325590-26324925 (view UCSC Genome Browser custom track)
Alignm length: 671
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 315

Conread position: 45-703
Cow position: chr6:17048971-17049648 (view UCSC Genome Browser custom track)
Alignm length: 683
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 329

Conread position: 45-703
Cow position: chr6:41408008-41408679 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 244

Conread position: 46-639
Cow position: chr6:45936900-45937502 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 322

Conread position: 47-707
Cow position: chr6:66189196-66188521 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 320

Conread position: 51-712
Cow position: chr6:3151827-3152505 (view UCSC Genome Browser custom track)
Alignm length: 684
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 158

Conread position: 64-542
Cow position: chr6:1275364-1274877 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 224

Conread position: 66-703
Cow position: chr6:36230897-36230251 (view UCSC Genome Browser custom track)
Alignm length: 652
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 25

Conread position: 71-703
Cow position: chr6:43087956-43087323 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 288

Conread position: 81-365
Cow position: chr6:18496965-18497257 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 199
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 22, 263

Conread position: 84-568
Cow position: chr6:6474788-6474308 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 264

Conread position: 85-706
Cow position: chr6:2543369-2544008 (view UCSC Genome Browser custom track)
Alignm length: 653
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 24

Conread position: 87-377
Cow position: chr6:64425147-64425444 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 159

Conread position: 87-429
Cow position: chr6:21711213-21711560 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 272

Conread position: 87-561
Cow position: chr6:22679507-22679987 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 277

Conread position: 87-586
Cow position: chr6:6159310-6159814 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 100

Conread position: 87-623
Cow position: chr6:7191895-7191379 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 189

Conread position: 87-703
Cow position: chr6:182891-182270 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 271

Conread position: 87-703
Cow position: chr6:10611477-10612107 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 47

Conread position: 87-703
Cow position: chr6:28185678-28185044 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 272

Conread position: 87-703
Cow position: chr6:30270251-30269627 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 277

Conread position: 87-703
Cow position: chr6:33490402-33489779 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 272

Conread position: 87-705
Cow position: chr6:65867439-65868061 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 277

Conread position: 87-712
Cow position: chr6:15924937-15924309 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 278

Conread position: 89-709
Cow position: chr6:3927800-3928422 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 277

Conread position: 94-703
Cow position: chr6:44147289-44146672 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 177

Conread position: 101-561
Cow position: chr6:39359523-39359067 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 26

Conread position: 101-703
Cow position: chr6:9840468-9839862 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 179

Conread position: 101-703
Cow position: chr6:11354496-11353898 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 257

Conread position: 101-712
Cow position: chr6:6120312-6119703 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 257

Conread position: 102-592
Cow position: chr6:53462484-53461990 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 248

Conread position: 102-712
Cow position: chr6:3893974-3893352 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 139

Conread position: 104-620
Cow position: chr6:24584695-24584187 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 176

Conread position: 105-580
Cow position: chr6:27761376-27761854 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 64

Conread position: 108-622
Cow position: chr6:16595677-16596175 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 347
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 112, 172

Conread position: 109-703
Cow position: chr6:31913500-31912900 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 254

Conread position: 114-520
Cow position: chr6:66277113-66277532 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 169

Conread position: 119-703
Cow position: chr6:10651100-10650519 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 88

Conread position: 124-547
Cow position: chr6:14065138-14065562 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 209

Conread position: 125-701
Cow position: chr6:34074552-34075140 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 31

Conread position: 126-334
Cow position: chr6:705561-705775 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 167
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 94, 155

Conread position: 126-703
Cow position: chr6:45975201-45975774 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 232

Conread position: 129-639
Cow position: chr6:1888740-1888237 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 227

Conread position: 138-703
Cow position: chr6:47573486-47574065 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 275

Conread position: 142-703
Cow position: chr6:16418972-16418407 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 38

Conread position: 142-703
Cow position: chr6:50486066-50485509 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 217

Conread position: 143-703
Cow position: chr6:27172540-27173104 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 11

Conread position: 145-703
Cow position: chr6:15784261-15783718 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 29

Conread position: 145-703
Cow position: chr6:35417230-35416698 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 62

Conread position: 146-601
Cow position: chr6:11829914-11829459 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 74

Conread position: 147-703
Cow position: chr6:365604-366165 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 214

Conread position: 159-703
Cow position: chr6:20553516-20552967 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 201

Conread position: 171-703
Cow position: chr6:11289718-11289192 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 30

Conread position: 175-703
Cow position: chr6:11168247-11168782 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 106

Conread position: 175-703
Cow position: chr6:47380419-47380942 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 186

Conread position: 183-504
Cow position: chr6:10680628-10680952 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 233
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 39, 17

Conread position: 193-561
Cow position: chr6:25217716-25218085 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 144

Conread position: 195-505
Cow position: chr6:66548239-66548545 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 211
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 23, 73

Conread position: 196-703
Cow position: chr6:45724383-45723871 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 98

Conread position: 196-703
Cow position: chr6:52899716-52900221 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 163

Conread position: 201-703
Cow position: chr6:15276473-15275965 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 154

Conread position: 203-703
Cow position: chr6:888326-888832 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 160

Conread position: 215-703
Cow position: chr6:67553022-67553507 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 140

Conread position: 220-644
Cow position: chr6:1096944-1096512 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 41

Conread position: 221-475
Cow position: chr6:38672026-38672274 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 184
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 58, 28

Conread position: 222-410
Cow position: chr6:68871131-68871320 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 141
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 78, 132

Conread position: 222-429
Cow position: chr6:23880560-23880355 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 156
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 81, 135

Conread position: 222-657
Cow position: chr6:38932462-38932025 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 132

Conread position: 222-666
Cow position: chr6:49826460-49826014 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 137

Conread position: 222-707
Cow position: chr6:46947612-46948097 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 22

Conread position: 222-708
Cow position: chr6:14851954-14851467 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 132

Conread position: 226-538
Cow position: chr6:9586861-9587166 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 123

Conread position: 227-628
Cow position: chr6:18520286-18519882 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 128

Conread position: 227-703
Cow position: chr6:53543681-53543208 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 105

Conread position: 227-703
Cow position: chr6:55592854-55593345 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 9

Conread position: 228-523
Cow position: chr6:1402730-1402435 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 130

Conread position: 228-523
Cow position: chr6:1407318-1407023 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 130

Conread position: 228-622
Cow position: chr6:35883370-35883766 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 114

Conread position: 228-638
Cow position: chr6:49165801-49165392 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 48

Conread position: 228-703
Cow position: chr6:40550900-40550425 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 126

Conread position: 229-703
Cow position: chr6:65875482-65875009 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 124

Conread position: 231-703
Cow position: chr6:61829030-61829504 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 128

Conread position: 232-649
Cow position: chr6:41414540-41414124 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 274
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 68, 118

Conread position: 233-703
Cow position: chr6:14950863-14950377 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 197

Conread position: 233-703
Cow position: chr6:45480273-45479813 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 126

Conread position: 235-703
Cow position: chr6:57181626-57182089 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 15

Conread position: 240-706
Cow position: chr6:50121117-50120649 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 113

Conread position: 250-703
Cow position: chr6:530060-529616 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 66

Conread position: 250-703
Cow position: chr6:60332163-60332618 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 109

Conread position: 252-592
Cow position: chr6:1380632-1380295 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 230
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 50, 24

Conread position: 255-703
Cow position: chr6:6556786-6557236 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 104

Conread position: 256-703
Cow position: chr6:24632418-24631971 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 20

Conread position: 256-703
Cow position: chr6:58605356-58605803 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 99

Conread position: 257-703
Cow position: chr6:9234339-9234786 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 102

Conread position: 257-706
Cow position: chr6:30317114-30316664 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 95

Conread position: 262-712
Cow position: chr6:6182871-6182429 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 14

Conread position: 267-510
Cow position: chr6:13315476-13315232 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 181
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 33, 89

Conread position: 267-703
Cow position: chr6:22044171-22043734 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 87

Conread position: 270-453
Cow position: chr6:2641387-2641570 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 30, 89

Conread position: 273-550
Cow position: chr6:1262725-1263003 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 81

Conread position: 300-612
Cow position: chr6:17927298-17927607 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 7

Conread position: 300-637
Cow position: chr6:15153985-15154317 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 233
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 9, 15

Conread position: 300-658
Cow position: chr6:39897824-39898180 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 55

Conread position: 300-703
Cow position: chr6:57521048-57521450 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 55

Conread position: 300-703
Cow position: chr6:58030654-58031052 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 50

Conread position: 300-707
Cow position: chr6:32419827-32420229 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 44

Conread position: 301-703
Cow position: chr6:1498076-1498473 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 54

Conread position: 302-622
Cow position: chr6:55945550-55945232 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 223
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 6, 43

Conread position: 304-645
Cow position: chr6:30077404-30077067 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 232
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 148, 49

Conread position: 305-712
Cow position: chr6:33508144-33508530 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 47

Conread position: 315-638
Cow position: chr6:58880104-58880416 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 215
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 137, 27

Conread position: 315-703
Cow position: chr6:2452737-2453121 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 40

Conread position: 317-608
Cow position: chr6:16699097-16699386 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 27

Conread position: 325-703
Cow position: chr6:705905-706273 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 30

Conread position: 325-703
Cow position: chr6:31940766-31941142 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 30

Conread position: 347-707
Cow position: chr6:67211673-67211315 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 57

Conread position: 349-645
Cow position: chr6:49625753-49626047 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 206
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 106, 53

Conread position: 355-499
Cow position: chr6:46372897-46372755 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 97, 46

Conread position: 355-641
Cow position: chr6:1105223-1104939 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 46

Conread position: 355-703
Cow position: chr6:4388666-4389016 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 47

Conread position: 355-703
Cow position: chr6:32427085-32427426 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 232
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 40, 48

Conread position: 355-703
Cow position: chr6:67173481-67173830 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 46

Conread position: 355-709
Cow position: chr6:33983749-33984102 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 86

Conread position: 359-703
Cow position: chr6:18970501-18970165 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 42

Conread position: 360-688
Cow position: chr6:40759961-40760281 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 51

Conread position: 360-712
Cow position: chr6:47171013-47171352 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 52

Conread position: 361-703
Cow position: chr6:58016291-58016624 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 15

Conread position: 362-538
Cow position: chr6:40730130-40730305 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 90, 39

Conread position: 362-703
Cow position: chr6:2089216-2089549 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 49

Conread position: 362-703
Cow position: chr6:33809501-33809159 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 39

Conread position: 363-703
Cow position: chr6:47150035-47149697 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 38

Conread position: 364-534
Cow position: chr6:10680628-10680459 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 137
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 85, 38

Conread position: 370-703
Cow position: chr6:35600620-35600954 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 32

Conread position: 373-703
Cow position: chr6:38438550-38438881 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 38

Conread position: 377-703
Cow position: chr6:65892920-65892597 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 12

Conread position: 385-703
Cow position: chr6:7105573-7105257 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 17

Conread position: 388-703
Cow position: chr6:1796586-1796900 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 14

Conread position: 401-707
Cow position: chr6:14897155-14897461 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 209
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 171, 60

Conread position: 421-703
Cow position: chr6:21711695-21711981 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 421-703
Cow position: chr6:43039076-43038796 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 207
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 31, 55

Conread position: 423-630
Cow position: chr6:7921044-7920834 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 145
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 36, 194

Conread position: 425-703
Cow position: chr6:28481332-28481603 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 46

Conread position: 458-712
Cow position: chr6:18987172-18987420 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 194
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 114, 77

Conread position: 496-712
Cow position: chr6:10681061-10681274 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 165
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 49, 33

Conread position: 529-712
Cow position: chr6:19044314-19044496 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 43, 112

Show alignments to all cow chromosomes.