Cow genome map
| Conread name: | Ova1-OVRM10224H10 | 
| Conread position: | 1-181 | 
| Cow position: | chr6:5750494-5750679 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 9e-28 | 
| Alignm gaps (pig, cow): | 86, 17 | 
| Conread position: | 1-189 | 
| Cow position: | chr6:39349955-39350148 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 86, 17 | 
| Conread position: | 1-260 | 
| Cow position: | chr6:26325864-26325597 (view UCSC Genome Browser custom track) | 
| Alignm length: | 273 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 86, 17 | 
| Conread position: | 1-274 | 
| Cow position: | chr6:28186271-28185989 (view UCSC Genome Browser custom track) | 
| Alignm length: | 287 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 86, 17 | 
| Conread position: | 1-279 | 
| Cow position: | chr6:13367641-13367928 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 86, 17 | 
| Conread position: | 1-305 | 
| Cow position: | chr6:31813435-31813122 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 4.99983e-42 | 
| Alignm gaps (pig, cow): | 86, 17 | 
| Conread position: | 1-309 | 
| Cow position: | chr6:58390776-58390461 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 5.00264e-43 | 
| Alignm gaps (pig, cow): | 86, 17 | 
| Conread position: | 1-322 | 
| Cow position: | chr6:46296835-46297169 (view UCSC Genome Browser custom track) | 
| Alignm length: | 339 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 86, 17 | 
| Conread position: | 1-344 | 
| Cow position: | chr6:33810353-33810709 (view UCSC Genome Browser custom track) | 
| Alignm length: | 361 | 
| Alignm identity: | 268 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 86, 17 | 
| Conread position: | 1-356 | 
| Cow position: | chr6:27527424-27527058 (view UCSC Genome Browser custom track) | 
| Alignm length: | 373 | 
| Alignm identity: | 281 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 79, 17 | 
| Conread position: | 1-376 | 
| Cow position: | chr6:28400688-28400304 (view UCSC Genome Browser custom track) | 
| Alignm length: | 393 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 86, 17 | 
| Conread position: | 1-429 | 
| Cow position: | chr6:28702147-28701703 (view UCSC Genome Browser custom track) | 
| Alignm length: | 457 | 
| Alignm identity: | 318 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 86, 17 | 
| Conread position: | 1-438 | 
| Cow position: | chr6:2377266-2377712 (view UCSC Genome Browser custom track) | 
| Alignm length: | 455 | 
| Alignm identity: | 332 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 94, 17 | 
| Conread position: | 1-453 | 
| Cow position: | chr6:14133181-14132720 (view UCSC Genome Browser custom track) | 
| Alignm length: | 470 | 
| Alignm identity: | 346 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 86, 17 | 
| Conread position: | 1-463 | 
| Cow position: | chr6:35967904-35967432 (view UCSC Genome Browser custom track) | 
| Alignm length: | 481 | 
| Alignm identity: | 356 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 86, 17 | 
| Conread position: | 1-480 | 
| Cow position: | chr6:12971355-12970871 (view UCSC Genome Browser custom track) | 
| Alignm length: | 499 | 
| Alignm identity: | 366 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 86, 17 | 
| Conread position: | 1-533 | 
| Cow position: | chr6:41389890-41389352 (view UCSC Genome Browser custom track) | 
| Alignm length: | 557 | 
| Alignm identity: | 405 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 86, 17 | 
| Conread position: | 1-568 | 
| Cow position: | chr6:45591111-45591687 (view UCSC Genome Browser custom track) | 
| Alignm length: | 585 | 
| Alignm identity: | 438 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 86, 17 | 
| Conread position: | 1-592 | 
| Cow position: | chr6:62577620-62577018 (view UCSC Genome Browser custom track) | 
| Alignm length: | 611 | 
| Alignm identity: | 453 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 86, 17 | 
| Conread position: | 1-628 | 
| Cow position: | chr6:34129019-34129657 (view UCSC Genome Browser custom track) | 
| Alignm length: | 648 | 
| Alignm identity: | 482 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 86, 17 | 
| Conread position: | 1-628 | 
| Cow position: | chr6:58952558-58951924 (view UCSC Genome Browser custom track) | 
| Alignm length: | 647 | 
| Alignm identity: | 434 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 89, 16 | 
| Conread position: | 1-703 | 
| Cow position: | chr6:1507945-1507235 (view UCSC Genome Browser custom track) | 
| Alignm length: | 719 | 
| Alignm identity: | 533 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 86, 17 | 
| Conread position: | 1-703 | 
| Cow position: | chr6:10043777-10044490 (view UCSC Genome Browser custom track) | 
| Alignm length: | 722 | 
| Alignm identity: | 537 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 86, 17 | 
| Conread position: | 1-703 | 
| Cow position: | chr6:11019219-11019933 (view UCSC Genome Browser custom track) | 
| Alignm length: | 723 | 
| Alignm identity: | 546 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 86, 17 | 
| Conread position: | 1-703 | 
| Cow position: | chr6:20351527-20350814 (view UCSC Genome Browser custom track) | 
| Alignm length: | 722 | 
| Alignm identity: | 533 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 86, 17 | 
| Conread position: | 1-703 | 
| Cow position: | chr6:22738135-22737431 (view UCSC Genome Browser custom track) | 
| Alignm length: | 723 | 
| Alignm identity: | 537 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 94, 17 | 
| Conread position: | 1-703 | 
| Cow position: | chr6:25375529-25374833 (view UCSC Genome Browser custom track) | 
| Alignm length: | 725 | 
| Alignm identity: | 526 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 86, 17 | 
| Conread position: | 1-703 | 
| Cow position: | chr6:26772559-26771846 (view UCSC Genome Browser custom track) | 
| Alignm length: | 722 | 
| Alignm identity: | 538 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 83, 17 | 
| Conread position: | 1-703 | 
| Cow position: | chr6:27151878-27151166 (view UCSC Genome Browser custom track) | 
| Alignm length: | 722 | 
| Alignm identity: | 537 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 86, 17 | 
| Conread position: | 1-703 | 
| Cow position: | chr6:27474976-27475681 (view UCSC Genome Browser custom track) | 
| Alignm length: | 721 | 
| Alignm identity: | 526 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 85, 17 | 
| Conread position: | 1-703 | 
| Cow position: | chr6:28001818-28001121 (view UCSC Genome Browser custom track) | 
| Alignm length: | 725 | 
| Alignm identity: | 524 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 87, 17 | 
| Conread position: | 1-703 | 
| Cow position: | chr6:28489003-28488303 (view UCSC Genome Browser custom track) | 
| Alignm length: | 719 | 
| Alignm identity: | 526 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 94, 17 | 
| Conread position: | 1-703 | 
| Cow position: | chr6:38874096-38873386 (view UCSC Genome Browser custom track) | 
| Alignm length: | 722 | 
| Alignm identity: | 542 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 85, 17 | 
| Conread position: | 1-703 | 
| Cow position: | chr6:40277630-40278334 (view UCSC Genome Browser custom track) | 
| Alignm length: | 714 | 
| Alignm identity: | 520 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 102, 17 | 
| Conread position: | 1-703 | 
| Cow position: | chr6:41231051-41231763 (view UCSC Genome Browser custom track) | 
| Alignm length: | 723 | 
| Alignm identity: | 535 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 85, 17 | 
| Conread position: | 1-703 | 
| Cow position: | chr6:51149504-51150217 (view UCSC Genome Browser custom track) | 
| Alignm length: | 722 | 
| Alignm identity: | 534 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 94, 17 | 
| Conread position: | 1-703 | 
| Cow position: | chr6:51717108-51717829 (view UCSC Genome Browser custom track) | 
| Alignm length: | 732 | 
| Alignm identity: | 540 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 85, 17 | 
| Conread position: | 1-703 | 
| Cow position: | chr6:68029739-68030454 (view UCSC Genome Browser custom track) | 
| Alignm length: | 724 | 
| Alignm identity: | 535 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 94, 17 | 
| Conread position: | 1-706 | 
| Cow position: | chr6:19104347-19103631 (view UCSC Genome Browser custom track) | 
| Alignm length: | 726 | 
| Alignm identity: | 542 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 17 | 
| Conread position: | 1-706 | 
| Cow position: | chr6:62664338-62665052 (view UCSC Genome Browser custom track) | 
| Alignm length: | 725 | 
| Alignm identity: | 537 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 86, 11 | 
| Conread position: | 1-707 | 
| Cow position: | chr6:2876469-2875753 (view UCSC Genome Browser custom track) | 
| Alignm length: | 728 | 
| Alignm identity: | 545 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 89, 17 | 
| Conread position: | 1-707 | 
| Cow position: | chr6:28064553-28065271 (view UCSC Genome Browser custom track) | 
| Alignm length: | 728 | 
| Alignm identity: | 529 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 94, 16 | 
| Conread position: | 1-712 | 
| Cow position: | chr6:127570-126845 (view UCSC Genome Browser custom track) | 
| Alignm length: | 734 | 
| Alignm identity: | 538 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 86, 17 | 
| Conread position: | 1-712 | 
| Cow position: | chr6:19713668-19712955 (view UCSC Genome Browser custom track) | 
| Alignm length: | 732 | 
| Alignm identity: | 546 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 47, 17 | 
| Conread position: | 1-712 | 
| Cow position: | chr6:53936064-53935348 (view UCSC Genome Browser custom track) | 
| Alignm length: | 733 | 
| Alignm identity: | 509 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 96, 17 | 
| Conread position: | 2-703 | 
| Cow position: | chr6:65820019-65819307 (view UCSC Genome Browser custom track) | 
| Alignm length: | 724 | 
| Alignm identity: | 531 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 85, 16 | 
| Conread position: | 9-703 | 
| Cow position: | chr6:9738699-9737979 (view UCSC Genome Browser custom track) | 
| Alignm length: | 726 | 
| Alignm identity: | 532 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 71, 375 | 
| Conread position: | 9-703 | 
| Cow position: | chr6:56452529-56451820 (view UCSC Genome Browser custom track) | 
| Alignm length: | 714 | 
| Alignm identity: | 533 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 78, 358 | 
| Conread position: | 13-701 | 
| Cow position: | chr6:16767264-16766569 (view UCSC Genome Browser custom track) | 
| Alignm length: | 705 | 
| Alignm identity: | 534 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 75, 333 | 
| Conread position: | 13-703 | 
| Cow position: | chr6:16592539-16593225 (view UCSC Genome Browser custom track) | 
| Alignm length: | 710 | 
| Alignm identity: | 530 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 114 | 
| Conread position: | 14-372 | 
| Cow position: | chr6:50112674-50113018 (view UCSC Genome Browser custom track) | 
| Alignm length: | 364 | 
| Alignm identity: | 267 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 87, 42 | 
| Conread position: | 14-394 | 
| Cow position: | chr6:39435350-39434953 (view UCSC Genome Browser custom track) | 
| Alignm length: | 403 | 
| Alignm identity: | 297 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 71, 358 | 
| Conread position: | 14-428 | 
| Cow position: | chr6:225334-224915 (view UCSC Genome Browser custom track) | 
| Alignm length: | 434 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 74, 20 | 
| Conread position: | 14-523 | 
| Cow position: | chr6:14264406-14264930 (view UCSC Genome Browser custom track) | 
| Alignm length: | 540 | 
| Alignm identity: | 389 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 41, 26 | 
| Conread position: | 14-529 | 
| Cow position: | chr6:51876401-51876924 (view UCSC Genome Browser custom track) | 
| Alignm length: | 536 | 
| Alignm identity: | 395 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 134 | 
| Conread position: | 14-666 | 
| Cow position: | chr6:43791001-43790338 (view UCSC Genome Browser custom track) | 
| Alignm length: | 673 | 
| Alignm identity: | 497 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 19 | 
| Conread position: | 14-680 | 
| Cow position: | chr6:8536722-8536043 (view UCSC Genome Browser custom track) | 
| Alignm length: | 687 | 
| Alignm identity: | 511 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 71, 185 | 
| Conread position: | 14-703 | 
| Cow position: | chr6:16704157-16703463 (view UCSC Genome Browser custom track) | 
| Alignm length: | 713 | 
| Alignm identity: | 517 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 346 | 
| Conread position: | 14-703 | 
| Cow position: | chr6:21833076-21832386 (view UCSC Genome Browser custom track) | 
| Alignm length: | 700 | 
| Alignm identity: | 482 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 89, 114 | 
| Conread position: | 14-703 | 
| Cow position: | chr6:28103291-28102594 (view UCSC Genome Browser custom track) | 
| Alignm length: | 709 | 
| Alignm identity: | 502 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 72, 46 | 
| Conread position: | 14-703 | 
| Cow position: | chr6:42266307-42267008 (view UCSC Genome Browser custom track) | 
| Alignm length: | 715 | 
| Alignm identity: | 522 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 74, 356 | 
| Conread position: | 14-703 | 
| Cow position: | chr6:50570773-50571466 (view UCSC Genome Browser custom track) | 
| Alignm length: | 707 | 
| Alignm identity: | 517 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 72, 287 | 
| Conread position: | 14-703 | 
| Cow position: | chr6:59595824-59596516 (view UCSC Genome Browser custom track) | 
| Alignm length: | 720 | 
| Alignm identity: | 526 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 76, 365 | 
| Conread position: | 14-703 | 
| Cow position: | chr6:64718894-64719593 (view UCSC Genome Browser custom track) | 
| Alignm length: | 706 | 
| Alignm identity: | 518 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 72, 45 | 
| Conread position: | 14-707 | 
| Cow position: | chr6:33950595-33949879 (view UCSC Genome Browser custom track) | 
| Alignm length: | 733 | 
| Alignm identity: | 492 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 76, 145 | 
| Conread position: | 14-711 | 
| Cow position: | chr6:3573356-3574075 (view UCSC Genome Browser custom track) | 
| Alignm length: | 734 | 
| Alignm identity: | 511 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 76, 61 | 
| Conread position: | 14-712 | 
| Cow position: | chr6:25358314-25357577 (view UCSC Genome Browser custom track) | 
| Alignm length: | 743 | 
| Alignm identity: | 535 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 66, 206 | 
| Conread position: | 15-274 | 
| Cow position: | chr6:18912902-18912630 (view UCSC Genome Browser custom track) | 
| Alignm length: | 275 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 4.99983e-42 | 
| Alignm gaps (pig, cow): | 31, 26 | 
| Conread position: | 15-279 | 
| Cow position: | chr6:13979335-13979612 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 0 | 
| Conread position: | 15-331 | 
| Cow position: | chr6:28135507-28135839 (view UCSC Genome Browser custom track) | 
| Alignm length: | 334 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 73, 20 | 
| Conread position: | 15-344 | 
| Cow position: | chr6:65905722-65905379 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 0 | 
| Conread position: | 15-394 | 
| Cow position: | chr6:13849647-13850037 (view UCSC Genome Browser custom track) | 
| Alignm length: | 395 | 
| Alignm identity: | 280 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 80, 251 | 
| Conread position: | 15-654 | 
| Cow position: | chr6:17595713-17595059 (view UCSC Genome Browser custom track) | 
| Alignm length: | 660 | 
| Alignm identity: | 500 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 26 | 
| Conread position: | 15-703 | 
| Cow position: | chr6:328787-328088 (view UCSC Genome Browser custom track) | 
| Alignm length: | 707 | 
| Alignm identity: | 527 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 80, 354 | 
| Conread position: | 15-703 | 
| Cow position: | chr6:7138763-7138067 (view UCSC Genome Browser custom track) | 
| Alignm length: | 703 | 
| Alignm identity: | 524 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 347 | 
| Conread position: | 15-703 | 
| Cow position: | chr6:7468079-7467375 (view UCSC Genome Browser custom track) | 
| Alignm length: | 709 | 
| Alignm identity: | 527 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 75, 349 | 
| Conread position: | 15-703 | 
| Cow position: | chr6:11870359-11869659 (view UCSC Genome Browser custom track) | 
| Alignm length: | 705 | 
| Alignm identity: | 516 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 78, 349 | 
| Conread position: | 15-703 | 
| Cow position: | chr6:12663741-12663040 (view UCSC Genome Browser custom track) | 
| Alignm length: | 708 | 
| Alignm identity: | 530 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 75, 44 | 
| Conread position: | 15-703 | 
| Cow position: | chr6:13308813-13308123 (view UCSC Genome Browser custom track) | 
| Alignm length: | 708 | 
| Alignm identity: | 518 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 79, 352 | 
| Conread position: | 15-703 | 
| Cow position: | chr6:14928033-14928734 (view UCSC Genome Browser custom track) | 
| Alignm length: | 706 | 
| Alignm identity: | 527 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 28, 350 | 
| Conread position: | 15-703 | 
| Cow position: | chr6:16050718-16050018 (view UCSC Genome Browser custom track) | 
| Alignm length: | 707 | 
| Alignm identity: | 527 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 80, 348 | 
| Conread position: | 15-703 | 
| Cow position: | chr6:26668452-26667749 (view UCSC Genome Browser custom track) | 
| Alignm length: | 709 | 
| Alignm identity: | 522 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 80, 353 | 
| Conread position: | 15-703 | 
| Cow position: | chr6:28159991-28160684 (view UCSC Genome Browser custom track) | 
| Alignm length: | 705 | 
| Alignm identity: | 517 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 80, 60 | 
| Conread position: | 15-703 | 
| Cow position: | chr6:37387154-37387841 (view UCSC Genome Browser custom track) | 
| Alignm length: | 704 | 
| Alignm identity: | 509 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 353 | 
| Conread position: | 15-703 | 
| Cow position: | chr6:39911898-39912597 (view UCSC Genome Browser custom track) | 
| Alignm length: | 708 | 
| Alignm identity: | 525 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 80, 112 | 
| Conread position: | 15-703 | 
| Cow position: | chr6:51867567-51868262 (view UCSC Genome Browser custom track) | 
| Alignm length: | 707 | 
| Alignm identity: | 523 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 80, 352 | 
| Conread position: | 15-703 | 
| Cow position: | chr6:60378735-60379438 (view UCSC Genome Browser custom track) | 
| Alignm length: | 708 | 
| Alignm identity: | 531 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 72, 357 | 
| Conread position: | 16-703 | 
| Cow position: | chr6:1536283-1536980 (view UCSC Genome Browser custom track) | 
| Alignm length: | 704 | 
| Alignm identity: | 518 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 70, 284 | 
| Conread position: | 16-703 | 
| Cow position: | chr6:5947202-5946500 (view UCSC Genome Browser custom track) | 
| Alignm length: | 708 | 
| Alignm identity: | 532 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 70, 136 | 
| Conread position: | 18-218 | 
| Cow position: | chr6:15277973-15277764 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 67, 0 | 
| Conread position: | 18-390 | 
| Cow position: | chr6:3485823-3485437 (view UCSC Genome Browser custom track) | 
| Alignm length: | 390 | 
| Alignm identity: | 288 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 345 | 
| Conread position: | 18-447 | 
| Cow position: | chr6:35824427-35824863 (view UCSC Genome Browser custom track) | 
| Alignm length: | 445 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 197 | 
| Conread position: | 18-450 | 
| Cow position: | chr6:18986590-18987039 (view UCSC Genome Browser custom track) | 
| Alignm length: | 460 | 
| Alignm identity: | 332 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 247 | 
| Conread position: | 18-531 | 
| Cow position: | chr6:8756242-8755715 (view UCSC Genome Browser custom track) | 
| Alignm length: | 532 | 
| Alignm identity: | 398 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 72, 349 | 
| Conread position: | 18-633 | 
| Cow position: | chr6:21975528-21976156 (view UCSC Genome Browser custom track) | 
| Alignm length: | 635 | 
| Alignm identity: | 471 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 70, 327 | 
| Conread position: | 18-666 | 
| Cow position: | chr6:48997-48334 (view UCSC Genome Browser custom track) | 
| Alignm length: | 669 | 
| Alignm identity: | 506 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 68, 255 | 
| Conread position: | 18-680 | 
| Cow position: | chr6:48875756-48875088 (view UCSC Genome Browser custom track) | 
| Alignm length: | 683 | 
| Alignm identity: | 513 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 100 | 
| Conread position: | 18-701 | 
| Cow position: | chr6:20450543-20451233 (view UCSC Genome Browser custom track) | 
| Alignm length: | 699 | 
| Alignm identity: | 533 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 301 | 
| Conread position: | 18-701 | 
| Cow position: | chr6:51732657-51733354 (view UCSC Genome Browser custom track) | 
| Alignm length: | 703 | 
| Alignm identity: | 535 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 344 | 
| Conread position: | 18-703 | 
| Cow position: | chr6:478123-478825 (view UCSC Genome Browser custom track) | 
| Alignm length: | 707 | 
| Alignm identity: | 537 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 56, 354 | 
| Conread position: | 18-703 | 
| Cow position: | chr6:916620-917318 (view UCSC Genome Browser custom track) | 
| Alignm length: | 705 | 
| Alignm identity: | 530 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 68, 41 | 
| Conread position: | 18-703 | 
| Cow position: | chr6:3272904-3272207 (view UCSC Genome Browser custom track) | 
| Alignm length: | 705 | 
| Alignm identity: | 523 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 100 | 
| Conread position: | 18-703 | 
| Cow position: | chr6:8204755-8205462 (view UCSC Genome Browser custom track) | 
| Alignm length: | 717 | 
| Alignm identity: | 530 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 68, 357 | 
| Conread position: | 18-703 | 
| Cow position: | chr6:9734377-9733696 (view UCSC Genome Browser custom track) | 
| Alignm length: | 697 | 
| Alignm identity: | 509 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 82, 69 | 
| Conread position: | 18-703 | 
| Cow position: | chr6:11722619-11721933 (view UCSC Genome Browser custom track) | 
| Alignm length: | 702 | 
| Alignm identity: | 521 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 68, 351 | 
| Conread position: | 18-703 | 
| Cow position: | chr6:15138591-15137898 (view UCSC Genome Browser custom track) | 
| Alignm length: | 704 | 
| Alignm identity: | 523 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 68, 349 | 
| Conread position: | 18-703 | 
| Cow position: | chr6:17120963-17121661 (view UCSC Genome Browser custom track) | 
| Alignm length: | 705 | 
| Alignm identity: | 516 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 354 | 
| Conread position: | 18-703 | 
| Cow position: | chr6:24241866-24242562 (view UCSC Genome Browser custom track) | 
| Alignm length: | 705 | 
| Alignm identity: | 528 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 68, 349 | 
| Conread position: | 18-703 | 
| Cow position: | chr6:25791123-25790426 (view UCSC Genome Browser custom track) | 
| Alignm length: | 708 | 
| Alignm identity: | 527 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 68, 105 | 
| Conread position: | 18-703 | 
| Cow position: | chr6:28171482-28172184 (view UCSC Genome Browser custom track) | 
| Alignm length: | 710 | 
| Alignm identity: | 528 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 342 | 
| Conread position: | 18-703 | 
| Cow position: | chr6:35874133-35873454 (view UCSC Genome Browser custom track) | 
| Alignm length: | 702 | 
| Alignm identity: | 511 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 65, 43 | 
| Conread position: | 18-703 | 
| Cow position: | chr6:36530862-36531549 (view UCSC Genome Browser custom track) | 
| Alignm length: | 706 | 
| Alignm identity: | 522 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 77, 33 | 
| Conread position: | 18-703 | 
| Cow position: | chr6:39331955-39331258 (view UCSC Genome Browser custom track) | 
| Alignm length: | 704 | 
| Alignm identity: | 525 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 72, 353 | 
| Conread position: | 18-703 | 
| Cow position: | chr6:43620306-43621006 (view UCSC Genome Browser custom track) | 
| Alignm length: | 705 | 
| Alignm identity: | 528 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 77, 349 | 
| Conread position: | 18-703 | 
| Cow position: | chr6:47040623-47039935 (view UCSC Genome Browser custom track) | 
| Alignm length: | 705 | 
| Alignm identity: | 520 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 150 | 
| Conread position: | 18-703 | 
| Cow position: | chr6:55539694-55538996 (view UCSC Genome Browser custom track) | 
| Alignm length: | 705 | 
| Alignm identity: | 533 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 68, 249 | 
| Conread position: | 18-703 | 
| Cow position: | chr6:59618641-59619351 (view UCSC Genome Browser custom track) | 
| Alignm length: | 712 | 
| Alignm identity: | 527 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 70, 405 | 
| Conread position: | 18-703 | 
| Cow position: | chr6:60875873-60876571 (view UCSC Genome Browser custom track) | 
| Alignm length: | 707 | 
| Alignm identity: | 531 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 350 | 
| Conread position: | 19-545 | 
| Cow position: | chr6:237289-236759 (view UCSC Genome Browser custom track) | 
| Alignm length: | 541 | 
| Alignm identity: | 351 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 51, 222 | 
| Conread position: | 21-220 | 
| Cow position: | chr6:62487911-62487703 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 66, 130 | 
| Conread position: | 21-247 | 
| Cow position: | chr6:5130739-5130507 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 9e-28 | 
| Alignm gaps (pig, cow): | 70, 127 | 
| Conread position: | 21-344 | 
| Cow position: | chr6:52194389-52194051 (view UCSC Genome Browser custom track) | 
| Alignm length: | 342 | 
| Alignm identity: | 262 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 37 | 
| Conread position: | 21-365 | 
| Cow position: | chr6:28845545-28845196 (view UCSC Genome Browser custom track) | 
| Alignm length: | 351 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 80, 136 | 
| Conread position: | 21-403 | 
| Cow position: | chr6:51895502-51895112 (view UCSC Genome Browser custom track) | 
| Alignm length: | 399 | 
| Alignm identity: | 297 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 134 | 
| Conread position: | 21-412 | 
| Cow position: | chr6:24624815-24624411 (view UCSC Genome Browser custom track) | 
| Alignm length: | 410 | 
| Alignm identity: | 295 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 115 | 
| Conread position: | 21-553 | 
| Cow position: | chr6:55901824-55902347 (view UCSC Genome Browser custom track) | 
| Alignm length: | 543 | 
| Alignm identity: | 375 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 168 | 
| Conread position: | 21-554 | 
| Cow position: | chr6:4467189-4467741 (view UCSC Genome Browser custom track) | 
| Alignm length: | 560 | 
| Alignm identity: | 425 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 64, 55 | 
| Conread position: | 21-591 | 
| Cow position: | chr6:28108706-28108135 (view UCSC Genome Browser custom track) | 
| Alignm length: | 592 | 
| Alignm identity: | 376 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 49, 68 | 
| Conread position: | 21-592 | 
| Cow position: | chr6:52696218-52696795 (view UCSC Genome Browser custom track) | 
| Alignm length: | 590 | 
| Alignm identity: | 431 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 59, 251 | 
| Conread position: | 21-600 | 
| Cow position: | chr6:1819219-1818628 (view UCSC Genome Browser custom track) | 
| Alignm length: | 598 | 
| Alignm identity: | 448 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 65, 168 | 
| Conread position: | 21-627 | 
| Cow position: | chr6:12646815-12647427 (view UCSC Genome Browser custom track) | 
| Alignm length: | 627 | 
| Alignm identity: | 449 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 64, 278 | 
| Conread position: | 21-627 | 
| Cow position: | chr6:25409394-25408765 (view UCSC Genome Browser custom track) | 
| Alignm length: | 638 | 
| Alignm identity: | 356 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 74, 108 | 
| Conread position: | 21-642 | 
| Cow position: | chr6:6720566-6721184 (view UCSC Genome Browser custom track) | 
| Alignm length: | 639 | 
| Alignm identity: | 439 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 23 | 
| Conread position: | 21-644 | 
| Cow position: | chr6:63405384-63406018 (view UCSC Genome Browser custom track) | 
| Alignm length: | 655 | 
| Alignm identity: | 448 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 49, 101 | 
| Conread position: | 21-664 | 
| Cow position: | chr6:40974764-40975420 (view UCSC Genome Browser custom track) | 
| Alignm length: | 663 | 
| Alignm identity: | 492 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 74, 349 | 
| Conread position: | 21-703 | 
| Cow position: | chr6:3886928-3886230 (view UCSC Genome Browser custom track) | 
| Alignm length: | 705 | 
| Alignm identity: | 523 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 65, 232 | 
| Conread position: | 21-703 | 
| Cow position: | chr6:12628479-12629171 (view UCSC Genome Browser custom track) | 
| Alignm length: | 709 | 
| Alignm identity: | 518 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 258 | 
| Conread position: | 21-703 | 
| Cow position: | chr6:34493256-34493950 (view UCSC Genome Browser custom track) | 
| Alignm length: | 702 | 
| Alignm identity: | 526 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 64, 106 | 
| Conread position: | 21-703 | 
| Cow position: | chr6:34504943-34504246 (view UCSC Genome Browser custom track) | 
| Alignm length: | 703 | 
| Alignm identity: | 534 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 64, 106 | 
| Conread position: | 21-703 | 
| Cow position: | chr6:39999878-39999184 (view UCSC Genome Browser custom track) | 
| Alignm length: | 702 | 
| Alignm identity: | 527 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 64, 256 | 
| Conread position: | 21-703 | 
| Cow position: | chr6:41191903-41192601 (view UCSC Genome Browser custom track) | 
| Alignm length: | 700 | 
| Alignm identity: | 520 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 56, 395 | 
| Conread position: | 21-703 | 
| Cow position: | chr6:41676517-41677204 (view UCSC Genome Browser custom track) | 
| Alignm length: | 701 | 
| Alignm identity: | 481 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 72, 13 | 
| Conread position: | 21-703 | 
| Cow position: | chr6:43186680-43187384 (view UCSC Genome Browser custom track) | 
| Alignm length: | 714 | 
| Alignm identity: | 510 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 111 | 
| Conread position: | 21-703 | 
| Cow position: | chr6:43798332-43797626 (view UCSC Genome Browser custom track) | 
| Alignm length: | 713 | 
| Alignm identity: | 533 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 25 | 
| Conread position: | 21-703 | 
| Cow position: | chr6:44018251-44017553 (view UCSC Genome Browser custom track) | 
| Alignm length: | 705 | 
| Alignm identity: | 525 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 15, 329 | 
| Conread position: | 21-703 | 
| Cow position: | chr6:50636868-50637551 (view UCSC Genome Browser custom track) | 
| Alignm length: | 701 | 
| Alignm identity: | 523 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 330 | 
| Conread position: | 21-703 | 
| Cow position: | chr6:55238273-55238965 (view UCSC Genome Browser custom track) | 
| Alignm length: | 702 | 
| Alignm identity: | 526 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 346 | 
| Conread position: | 21-712 | 
| Cow position: | chr6:43330830-43330133 (view UCSC Genome Browser custom track) | 
| Alignm length: | 710 | 
| Alignm identity: | 462 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 35 | 
| Conread position: | 22-681 | 
| Cow position: | chr6:2580999-2581654 (view UCSC Genome Browser custom track) | 
| Alignm length: | 679 | 
| Alignm identity: | 487 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 263 | 
| Conread position: | 22-703 | 
| Cow position: | chr6:10235788-10236470 (view UCSC Genome Browser custom track) | 
| Alignm length: | 698 | 
| Alignm identity: | 492 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 56, 153 | 
| Conread position: | 23-550 | 
| Cow position: | chr6:43778106-43778639 (view UCSC Genome Browser custom track) | 
| Alignm length: | 540 | 
| Alignm identity: | 396 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 56, 44 | 
| Conread position: | 23-703 | 
| Cow position: | chr6:55473903-55474581 (view UCSC Genome Browser custom track) | 
| Alignm length: | 694 | 
| Alignm identity: | 470 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 178 | 
| Conread position: | 24-556 | 
| Cow position: | chr6:44096415-44096953 (view UCSC Genome Browser custom track) | 
| Alignm length: | 553 | 
| Alignm identity: | 378 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 10 | 
| Conread position: | 24-645 | 
| Cow position: | chr6:40158923-40158300 (view UCSC Genome Browser custom track) | 
| Alignm length: | 640 | 
| Alignm identity: | 428 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 66, 162 | 
| Conread position: | 24-703 | 
| Cow position: | chr6:65929833-65930533 (view UCSC Genome Browser custom track) | 
| Alignm length: | 707 | 
| Alignm identity: | 492 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 30 | 
| Conread position: | 25-211 | 
| Cow position: | chr6:46866923-46866728 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 7e-36 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 25-630 | 
| Cow position: | chr6:10267504-10266889 (view UCSC Genome Browser custom track) | 
| Alignm length: | 620 | 
| Alignm identity: | 469 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 70, 330 | 
| Conread position: | 29-385 | 
| Cow position: | chr6:1796081-1795712 (view UCSC Genome Browser custom track) | 
| Alignm length: | 375 | 
| Alignm identity: | 275 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 59, 253 | 
| Conread position: | 29-423 | 
| Cow position: | chr6:34017999-34018406 (view UCSC Genome Browser custom track) | 
| Alignm length: | 412 | 
| Alignm identity: | 305 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 58, 340 | 
| Conread position: | 30-712 | 
| Cow position: | chr6:4904386-4903712 (view UCSC Genome Browser custom track) | 
| Alignm length: | 696 | 
| Alignm identity: | 524 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 58, 40 | 
| Conread position: | 34-621 | 
| Cow position: | chr6:50720689-50721289 (view UCSC Genome Browser custom track) | 
| Alignm length: | 607 | 
| Alignm identity: | 455 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 333 | 
| Conread position: | 34-703 | 
| Cow position: | chr6:33465557-33466233 (view UCSC Genome Browser custom track) | 
| Alignm length: | 689 | 
| Alignm identity: | 509 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 56, 32 | 
| Conread position: | 36-628 | 
| Cow position: | chr6:37385746-37386345 (view UCSC Genome Browser custom track) | 
| Alignm length: | 609 | 
| Alignm identity: | 416 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 52, 328 | 
| Conread position: | 39-703 | 
| Cow position: | chr6:34844116-34843438 (view UCSC Genome Browser custom track) | 
| Alignm length: | 684 | 
| Alignm identity: | 527 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 47, 214 | 
| Conread position: | 43-566 | 
| Cow position: | chr6:3685557-3686087 (view UCSC Genome Browser custom track) | 
| Alignm length: | 537 | 
| Alignm identity: | 398 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 48, 322 | 
| Conread position: | 44-703 | 
| Cow position: | chr6:26325590-26324925 (view UCSC Genome Browser custom track) | 
| Alignm length: | 671 | 
| Alignm identity: | 463 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 58, 315 | 
| Conread position: | 45-703 | 
| Cow position: | chr6:17048971-17049648 (view UCSC Genome Browser custom track) | 
| Alignm length: | 683 | 
| Alignm identity: | 516 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 14, 329 | 
| Conread position: | 45-703 | 
| Cow position: | chr6:41408008-41408679 (view UCSC Genome Browser custom track) | 
| Alignm length: | 678 | 
| Alignm identity: | 508 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 35, 244 | 
| Conread position: | 46-639 | 
| Cow position: | chr6:45936900-45937502 (view UCSC Genome Browser custom track) | 
| Alignm length: | 614 | 
| Alignm identity: | 459 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 41, 322 | 
| Conread position: | 47-707 | 
| Cow position: | chr6:66189196-66188521 (view UCSC Genome Browser custom track) | 
| Alignm length: | 680 | 
| Alignm identity: | 508 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 43, 320 | 
| Conread position: | 51-712 | 
| Cow position: | chr6:3151827-3152505 (view UCSC Genome Browser custom track) | 
| Alignm length: | 684 | 
| Alignm identity: | 505 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 44, 158 | 
| Conread position: | 64-542 | 
| Cow position: | chr6:1275364-1274877 (view UCSC Genome Browser custom track) | 
| Alignm length: | 496 | 
| Alignm identity: | 362 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 224 | 
| Conread position: | 66-703 | 
| Cow position: | chr6:36230897-36230251 (view UCSC Genome Browser custom track) | 
| Alignm length: | 652 | 
| Alignm identity: | 489 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 13, 25 | 
| Conread position: | 71-703 | 
| Cow position: | chr6:43087956-43087323 (view UCSC Genome Browser custom track) | 
| Alignm length: | 647 | 
| Alignm identity: | 479 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 35, 288 | 
| Conread position: | 81-365 | 
| Cow position: | chr6:18496965-18497257 (view UCSC Genome Browser custom track) | 
| Alignm length: | 294 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 5e-33 | 
| Alignm gaps (pig, cow): | 22, 263 | 
| Conread position: | 84-568 | 
| Cow position: | chr6:6474788-6474308 (view UCSC Genome Browser custom track) | 
| Alignm length: | 491 | 
| Alignm identity: | 368 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 264 | 
| Conread position: | 85-706 | 
| Cow position: | chr6:2543369-2544008 (view UCSC Genome Browser custom track) | 
| Alignm length: | 653 | 
| Alignm identity: | 441 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 24 | 
| Conread position: | 87-377 | 
| Cow position: | chr6:64425147-64425444 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 15, 159 | 
| Conread position: | 87-429 | 
| Cow position: | chr6:21711213-21711560 (view UCSC Genome Browser custom track) | 
| Alignm length: | 352 | 
| Alignm identity: | 273 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 15, 272 | 
| Conread position: | 87-561 | 
| Cow position: | chr6:22679507-22679987 (view UCSC Genome Browser custom track) | 
| Alignm length: | 485 | 
| Alignm identity: | 366 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 15, 277 | 
| Conread position: | 87-586 | 
| Cow position: | chr6:6159310-6159814 (view UCSC Genome Browser custom track) | 
| Alignm length: | 512 | 
| Alignm identity: | 362 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 15, 100 | 
| Conread position: | 87-623 | 
| Cow position: | chr6:7191895-7191379 (view UCSC Genome Browser custom track) | 
| Alignm length: | 547 | 
| Alignm identity: | 375 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 16, 189 | 
| Conread position: | 87-703 | 
| Cow position: | chr6:182891-182270 (view UCSC Genome Browser custom track) | 
| Alignm length: | 631 | 
| Alignm identity: | 465 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 15, 271 | 
| Conread position: | 87-703 | 
| Cow position: | chr6:10611477-10612107 (view UCSC Genome Browser custom track) | 
| Alignm length: | 637 | 
| Alignm identity: | 456 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 16, 47 | 
| Conread position: | 87-703 | 
| Cow position: | chr6:28185678-28185044 (view UCSC Genome Browser custom track) | 
| Alignm length: | 639 | 
| Alignm identity: | 478 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 15, 272 | 
| Conread position: | 87-703 | 
| Cow position: | chr6:30270251-30269627 (view UCSC Genome Browser custom track) | 
| Alignm length: | 629 | 
| Alignm identity: | 493 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 15, 277 | 
| Conread position: | 87-703 | 
| Cow position: | chr6:33490402-33489779 (view UCSC Genome Browser custom track) | 
| Alignm length: | 628 | 
| Alignm identity: | 470 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 15, 272 | 
| Conread position: | 87-705 | 
| Cow position: | chr6:65867439-65868061 (view UCSC Genome Browser custom track) | 
| Alignm length: | 631 | 
| Alignm identity: | 432 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 15, 277 | 
| Conread position: | 87-712 | 
| Cow position: | chr6:15924937-15924309 (view UCSC Genome Browser custom track) | 
| Alignm length: | 638 | 
| Alignm identity: | 428 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 16, 278 | 
| Conread position: | 89-709 | 
| Cow position: | chr6:3927800-3928422 (view UCSC Genome Browser custom track) | 
| Alignm length: | 637 | 
| Alignm identity: | 438 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 16, 277 | 
| Conread position: | 94-703 | 
| Cow position: | chr6:44147289-44146672 (view UCSC Genome Browser custom track) | 
| Alignm length: | 623 | 
| Alignm identity: | 467 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 8, 177 | 
| Conread position: | 101-561 | 
| Cow position: | chr6:39359523-39359067 (view UCSC Genome Browser custom track) | 
| Alignm length: | 478 | 
| Alignm identity: | 327 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 95, 26 | 
| Conread position: | 101-703 | 
| Cow position: | chr6:9840468-9839862 (view UCSC Genome Browser custom track) | 
| Alignm length: | 619 | 
| Alignm identity: | 430 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 179 | 
| Conread position: | 101-703 | 
| Cow position: | chr6:11354496-11353898 (view UCSC Genome Browser custom track) | 
| Alignm length: | 617 | 
| Alignm identity: | 443 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 119, 257 | 
| Conread position: | 101-712 | 
| Cow position: | chr6:6120312-6119703 (view UCSC Genome Browser custom track) | 
| Alignm length: | 629 | 
| Alignm identity: | 483 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 122, 257 | 
| Conread position: | 102-592 | 
| Cow position: | chr6:53462484-53461990 (view UCSC Genome Browser custom track) | 
| Alignm length: | 500 | 
| Alignm identity: | 346 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 116, 248 | 
| Conread position: | 102-712 | 
| Cow position: | chr6:3893974-3893352 (view UCSC Genome Browser custom track) | 
| Alignm length: | 634 | 
| Alignm identity: | 436 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 99, 139 | 
| Conread position: | 104-620 | 
| Cow position: | chr6:24584695-24584187 (view UCSC Genome Browser custom track) | 
| Alignm length: | 524 | 
| Alignm identity: | 376 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 116, 176 | 
| Conread position: | 105-580 | 
| Cow position: | chr6:27761376-27761854 (view UCSC Genome Browser custom track) | 
| Alignm length: | 488 | 
| Alignm identity: | 368 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 113, 64 | 
| Conread position: | 108-622 | 
| Cow position: | chr6:16595677-16596175 (view UCSC Genome Browser custom track) | 
| Alignm length: | 524 | 
| Alignm identity: | 347 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 112, 172 | 
| Conread position: | 109-703 | 
| Cow position: | chr6:31913500-31912900 (view UCSC Genome Browser custom track) | 
| Alignm length: | 605 | 
| Alignm identity: | 457 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 109, 254 | 
| Conread position: | 114-520 | 
| Cow position: | chr6:66277113-66277532 (view UCSC Genome Browser custom track) | 
| Alignm length: | 425 | 
| Alignm identity: | 298 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 37, 169 | 
| Conread position: | 119-703 | 
| Cow position: | chr6:10651100-10650519 (view UCSC Genome Browser custom track) | 
| Alignm length: | 599 | 
| Alignm identity: | 424 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 99, 88 | 
| Conread position: | 124-547 | 
| Cow position: | chr6:14065138-14065562 (view UCSC Genome Browser custom track) | 
| Alignm length: | 432 | 
| Alignm identity: | 305 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 209 | 
| Conread position: | 125-701 | 
| Cow position: | chr6:34074552-34075140 (view UCSC Genome Browser custom track) | 
| Alignm length: | 597 | 
| Alignm identity: | 436 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 31 | 
| Conread position: | 126-334 | 
| Cow position: | chr6:705561-705775 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 9e-38 | 
| Alignm gaps (pig, cow): | 94, 155 | 
| Conread position: | 126-703 | 
| Cow position: | chr6:45975201-45975774 (view UCSC Genome Browser custom track) | 
| Alignm length: | 586 | 
| Alignm identity: | 318 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 92, 232 | 
| Conread position: | 129-639 | 
| Cow position: | chr6:1888740-1888237 (view UCSC Genome Browser custom track) | 
| Alignm length: | 519 | 
| Alignm identity: | 385 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 94, 227 | 
| Conread position: | 138-703 | 
| Cow position: | chr6:47573486-47574065 (view UCSC Genome Browser custom track) | 
| Alignm length: | 594 | 
| Alignm identity: | 410 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 45, 275 | 
| Conread position: | 142-703 | 
| Cow position: | chr6:16418972-16418407 (view UCSC Genome Browser custom track) | 
| Alignm length: | 579 | 
| Alignm identity: | 436 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 76, 38 | 
| Conread position: | 142-703 | 
| Cow position: | chr6:50486066-50485509 (view UCSC Genome Browser custom track) | 
| Alignm length: | 573 | 
| Alignm identity: | 438 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 77, 217 | 
| Conread position: | 143-703 | 
| Cow position: | chr6:27172540-27173104 (view UCSC Genome Browser custom track) | 
| Alignm length: | 572 | 
| Alignm identity: | 428 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 75, 11 | 
| Conread position: | 145-703 | 
| Cow position: | chr6:15784261-15783718 (view UCSC Genome Browser custom track) | 
| Alignm length: | 568 | 
| Alignm identity: | 402 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 75, 29 | 
| Conread position: | 145-703 | 
| Cow position: | chr6:35417230-35416698 (view UCSC Genome Browser custom track) | 
| Alignm length: | 565 | 
| Alignm identity: | 408 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 155, 62 | 
| Conread position: | 146-601 | 
| Cow position: | chr6:11829914-11829459 (view UCSC Genome Browser custom track) | 
| Alignm length: | 466 | 
| Alignm identity: | 353 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 155, 74 | 
| Conread position: | 147-703 | 
| Cow position: | chr6:365604-366165 (view UCSC Genome Browser custom track) | 
| Alignm length: | 572 | 
| Alignm identity: | 414 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 214 | 
| Conread position: | 159-703 | 
| Cow position: | chr6:20553516-20552967 (view UCSC Genome Browser custom track) | 
| Alignm length: | 555 | 
| Alignm identity: | 413 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 63, 201 | 
| Conread position: | 171-703 | 
| Cow position: | chr6:11289718-11289192 (view UCSC Genome Browser custom track) | 
| Alignm length: | 543 | 
| Alignm identity: | 403 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 49, 30 | 
| Conread position: | 175-703 | 
| Cow position: | chr6:11168247-11168782 (view UCSC Genome Browser custom track) | 
| Alignm length: | 542 | 
| Alignm identity: | 396 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 45, 106 | 
| Conread position: | 175-703 | 
| Cow position: | chr6:47380419-47380942 (view UCSC Genome Browser custom track) | 
| Alignm length: | 539 | 
| Alignm identity: | 369 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 43, 186 | 
| Conread position: | 183-504 | 
| Cow position: | chr6:10680628-10680952 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 39, 17 | 
| Conread position: | 193-561 | 
| Cow position: | chr6:25217716-25218085 (view UCSC Genome Browser custom track) | 
| Alignm length: | 378 | 
| Alignm identity: | 285 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 26, 144 | 
| Conread position: | 195-505 | 
| Cow position: | chr6:66548239-66548545 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 23, 73 | 
| Conread position: | 196-703 | 
| Cow position: | chr6:45724383-45723871 (view UCSC Genome Browser custom track) | 
| Alignm length: | 519 | 
| Alignm identity: | 385 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 22, 98 | 
| Conread position: | 196-703 | 
| Cow position: | chr6:52899716-52900221 (view UCSC Genome Browser custom track) | 
| Alignm length: | 515 | 
| Alignm identity: | 345 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 14, 163 | 
| Conread position: | 201-703 | 
| Cow position: | chr6:15276473-15275965 (view UCSC Genome Browser custom track) | 
| Alignm length: | 514 | 
| Alignm identity: | 385 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 9, 154 | 
| Conread position: | 203-703 | 
| Cow position: | chr6:888326-888832 (view UCSC Genome Browser custom track) | 
| Alignm length: | 511 | 
| Alignm identity: | 382 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 15, 160 | 
| Conread position: | 215-703 | 
| Cow position: | chr6:67553022-67553507 (view UCSC Genome Browser custom track) | 
| Alignm length: | 492 | 
| Alignm identity: | 294 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 187, 140 | 
| Conread position: | 220-644 | 
| Cow position: | chr6:1096944-1096512 (view UCSC Genome Browser custom track) | 
| Alignm length: | 443 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 49, 41 | 
| Conread position: | 221-475 | 
| Cow position: | chr6:38672026-38672274 (view UCSC Genome Browser custom track) | 
| Alignm length: | 261 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 9e-28 | 
| Alignm gaps (pig, cow): | 58, 28 | 
| Conread position: | 222-410 | 
| Cow position: | chr6:68871131-68871320 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 9e-28 | 
| Alignm gaps (pig, cow): | 78, 132 | 
| Conread position: | 222-429 | 
| Cow position: | chr6:23880560-23880355 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 81, 135 | 
| Conread position: | 222-657 | 
| Cow position: | chr6:38932462-38932025 (view UCSC Genome Browser custom track) | 
| Alignm length: | 442 | 
| Alignm identity: | 333 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 76, 132 | 
| Conread position: | 222-666 | 
| Cow position: | chr6:49826460-49826014 (view UCSC Genome Browser custom track) | 
| Alignm length: | 451 | 
| Alignm identity: | 342 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 78, 137 | 
| Conread position: | 222-707 | 
| Cow position: | chr6:46947612-46948097 (view UCSC Genome Browser custom track) | 
| Alignm length: | 492 | 
| Alignm identity: | 372 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 76, 22 | 
| Conread position: | 222-708 | 
| Cow position: | chr6:14851954-14851467 (view UCSC Genome Browser custom track) | 
| Alignm length: | 495 | 
| Alignm identity: | 361 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 59, 132 | 
| Conread position: | 226-538 | 
| Cow position: | chr6:9586861-9587166 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 72, 123 | 
| Conread position: | 227-628 | 
| Cow position: | chr6:18520286-18519882 (view UCSC Genome Browser custom track) | 
| Alignm length: | 409 | 
| Alignm identity: | 307 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 128 | 
| Conread position: | 227-703 | 
| Cow position: | chr6:53543681-53543208 (view UCSC Genome Browser custom track) | 
| Alignm length: | 484 | 
| Alignm identity: | 365 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 72, 105 | 
| Conread position: | 227-703 | 
| Cow position: | chr6:55592854-55593345 (view UCSC Genome Browser custom track) | 
| Alignm length: | 498 | 
| Alignm identity: | 357 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 9 | 
| Conread position: | 228-523 | 
| Cow position: | chr6:1402730-1402435 (view UCSC Genome Browser custom track) | 
| Alignm length: | 300 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 75, 130 | 
| Conread position: | 228-523 | 
| Cow position: | chr6:1407318-1407023 (view UCSC Genome Browser custom track) | 
| Alignm length: | 300 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 75, 130 | 
| Conread position: | 228-622 | 
| Cow position: | chr6:35883370-35883766 (view UCSC Genome Browser custom track) | 
| Alignm length: | 402 | 
| Alignm identity: | 288 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 114 | 
| Conread position: | 228-638 | 
| Cow position: | chr6:49165801-49165392 (view UCSC Genome Browser custom track) | 
| Alignm length: | 417 | 
| Alignm identity: | 279 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 72, 48 | 
| Conread position: | 228-703 | 
| Cow position: | chr6:40550900-40550425 (view UCSC Genome Browser custom track) | 
| Alignm length: | 481 | 
| Alignm identity: | 362 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 72, 126 | 
| Conread position: | 229-703 | 
| Cow position: | chr6:65875482-65875009 (view UCSC Genome Browser custom track) | 
| Alignm length: | 482 | 
| Alignm identity: | 345 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 65, 124 | 
| Conread position: | 231-703 | 
| Cow position: | chr6:61829030-61829504 (view UCSC Genome Browser custom track) | 
| Alignm length: | 479 | 
| Alignm identity: | 352 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 128 | 
| Conread position: | 232-649 | 
| Cow position: | chr6:41414540-41414124 (view UCSC Genome Browser custom track) | 
| Alignm length: | 427 | 
| Alignm identity: | 274 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 68, 118 | 
| Conread position: | 233-703 | 
| Cow position: | chr6:14950863-14950377 (view UCSC Genome Browser custom track) | 
| Alignm length: | 488 | 
| Alignm identity: | 358 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 43, 197 | 
| Conread position: | 233-703 | 
| Cow position: | chr6:45480273-45479813 (view UCSC Genome Browser custom track) | 
| Alignm length: | 477 | 
| Alignm identity: | 348 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 126 | 
| Conread position: | 235-703 | 
| Cow position: | chr6:57181626-57182089 (view UCSC Genome Browser custom track) | 
| Alignm length: | 475 | 
| Alignm identity: | 348 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 65, 15 | 
| Conread position: | 240-706 | 
| Cow position: | chr6:50121117-50120649 (view UCSC Genome Browser custom track) | 
| Alignm length: | 475 | 
| Alignm identity: | 364 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 113 | 
| Conread position: | 250-703 | 
| Cow position: | chr6:530060-529616 (view UCSC Genome Browser custom track) | 
| Alignm length: | 460 | 
| Alignm identity: | 335 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 49, 66 | 
| Conread position: | 250-703 | 
| Cow position: | chr6:60332163-60332618 (view UCSC Genome Browser custom track) | 
| Alignm length: | 460 | 
| Alignm identity: | 351 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 50, 109 | 
| Conread position: | 252-592 | 
| Cow position: | chr6:1380632-1380295 (view UCSC Genome Browser custom track) | 
| Alignm length: | 349 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 50, 24 | 
| Conread position: | 255-703 | 
| Cow position: | chr6:6556786-6557236 (view UCSC Genome Browser custom track) | 
| Alignm length: | 455 | 
| Alignm identity: | 338 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 45, 104 | 
| Conread position: | 256-703 | 
| Cow position: | chr6:24632418-24631971 (view UCSC Genome Browser custom track) | 
| Alignm length: | 459 | 
| Alignm identity: | 321 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 46, 20 | 
| Conread position: | 256-703 | 
| Cow position: | chr6:58605356-58605803 (view UCSC Genome Browser custom track) | 
| Alignm length: | 458 | 
| Alignm identity: | 335 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 28, 99 | 
| Conread position: | 257-703 | 
| Cow position: | chr6:9234339-9234786 (view UCSC Genome Browser custom track) | 
| Alignm length: | 453 | 
| Alignm identity: | 333 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 41, 102 | 
| Conread position: | 257-706 | 
| Cow position: | chr6:30317114-30316664 (view UCSC Genome Browser custom track) | 
| Alignm length: | 457 | 
| Alignm identity: | 307 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 43, 95 | 
| Conread position: | 262-712 | 
| Cow position: | chr6:6182871-6182429 (view UCSC Genome Browser custom track) | 
| Alignm length: | 456 | 
| Alignm identity: | 338 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 14 | 
| Conread position: | 267-510 | 
| Cow position: | chr6:13315476-13315232 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 33, 89 | 
| Conread position: | 267-703 | 
| Cow position: | chr6:22044171-22043734 (view UCSC Genome Browser custom track) | 
| Alignm length: | 443 | 
| Alignm identity: | 338 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 87 | 
| Conread position: | 270-453 | 
| Cow position: | chr6:2641387-2641570 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 30, 89 | 
| Conread position: | 273-550 | 
| Cow position: | chr6:1262725-1263003 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 27, 81 | 
| Conread position: | 300-612 | 
| Cow position: | chr6:17927298-17927607 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 152, 7 | 
| Conread position: | 300-637 | 
| Cow position: | chr6:15153985-15154317 (view UCSC Genome Browser custom track) | 
| Alignm length: | 342 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 9e-38 | 
| Alignm gaps (pig, cow): | 9, 15 | 
| Conread position: | 300-658 | 
| Cow position: | chr6:39897824-39898180 (view UCSC Genome Browser custom track) | 
| Alignm length: | 361 | 
| Alignm identity: | 275 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 152, 55 | 
| Conread position: | 300-703 | 
| Cow position: | chr6:57521048-57521450 (view UCSC Genome Browser custom track) | 
| Alignm length: | 407 | 
| Alignm identity: | 308 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 128, 55 | 
| Conread position: | 300-703 | 
| Cow position: | chr6:58030654-58031052 (view UCSC Genome Browser custom track) | 
| Alignm length: | 405 | 
| Alignm identity: | 307 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 152, 50 | 
| Conread position: | 300-707 | 
| Cow position: | chr6:32419827-32420229 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 299 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 152, 44 | 
| Conread position: | 301-703 | 
| Cow position: | chr6:1498076-1498473 (view UCSC Genome Browser custom track) | 
| Alignm length: | 404 | 
| Alignm identity: | 278 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 151, 54 | 
| Conread position: | 302-622 | 
| Cow position: | chr6:55945550-55945232 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 4.99983e-42 | 
| Alignm gaps (pig, cow): | 6, 43 | 
| Conread position: | 304-645 | 
| Cow position: | chr6:30077404-30077067 (view UCSC Genome Browser custom track) | 
| Alignm length: | 345 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 148, 49 | 
| Conread position: | 305-712 | 
| Cow position: | chr6:33508144-33508530 (view UCSC Genome Browser custom track) | 
| Alignm length: | 410 | 
| Alignm identity: | 295 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 107, 47 | 
| Conread position: | 315-638 | 
| Cow position: | chr6:58880104-58880416 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 137, 27 | 
| Conread position: | 315-703 | 
| Cow position: | chr6:2452737-2453121 (view UCSC Genome Browser custom track) | 
| Alignm length: | 391 | 
| Alignm identity: | 290 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 137, 40 | 
| Conread position: | 317-608 | 
| Cow position: | chr6:16699097-16699386 (view UCSC Genome Browser custom track) | 
| Alignm length: | 294 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 135, 27 | 
| Conread position: | 325-703 | 
| Cow position: | chr6:705905-706273 (view UCSC Genome Browser custom track) | 
| Alignm length: | 381 | 
| Alignm identity: | 286 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 127, 30 | 
| Conread position: | 325-703 | 
| Cow position: | chr6:31940766-31941142 (view UCSC Genome Browser custom track) | 
| Alignm length: | 381 | 
| Alignm identity: | 291 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 127, 30 | 
| Conread position: | 347-707 | 
| Cow position: | chr6:67211673-67211315 (view UCSC Genome Browser custom track) | 
| Alignm length: | 367 | 
| Alignm identity: | 275 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 17, 57 | 
| Conread position: | 349-645 | 
| Cow position: | chr6:49625753-49626047 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 106, 53 | 
| Conread position: | 355-499 | 
| Cow position: | chr6:46372897-46372755 (view UCSC Genome Browser custom track) | 
| Alignm length: | 146 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 97, 46 | 
| Conread position: | 355-641 | 
| Cow position: | chr6:1105223-1104939 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 46 | 
| Conread position: | 355-703 | 
| Cow position: | chr6:4388666-4389016 (view UCSC Genome Browser custom track) | 
| Alignm length: | 352 | 
| Alignm identity: | 270 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 97, 47 | 
| Conread position: | 355-703 | 
| Cow position: | chr6:32427085-32427426 (view UCSC Genome Browser custom track) | 
| Alignm length: | 356 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 40, 48 | 
| Conread position: | 355-703 | 
| Cow position: | chr6:67173481-67173830 (view UCSC Genome Browser custom track) | 
| Alignm length: | 351 | 
| Alignm identity: | 268 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 97, 46 | 
| Conread position: | 355-709 | 
| Cow position: | chr6:33983749-33984102 (view UCSC Genome Browser custom track) | 
| Alignm length: | 361 | 
| Alignm identity: | 264 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 217, 86 | 
| Conread position: | 359-703 | 
| Cow position: | chr6:18970501-18970165 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 90, 42 | 
| Conread position: | 360-688 | 
| Cow position: | chr6:40759961-40760281 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 92, 51 | 
| Conread position: | 360-712 | 
| Cow position: | chr6:47171013-47171352 (view UCSC Genome Browser custom track) | 
| Alignm length: | 356 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 92, 52 | 
| Conread position: | 361-703 | 
| Cow position: | chr6:58016291-58016624 (view UCSC Genome Browser custom track) | 
| Alignm length: | 345 | 
| Alignm identity: | 261 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 91, 15 | 
| Conread position: | 362-538 | 
| Cow position: | chr6:40730130-40730305 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 90, 39 | 
| Conread position: | 362-703 | 
| Cow position: | chr6:2089216-2089549 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 262 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 49 | 
| Conread position: | 362-703 | 
| Cow position: | chr6:33809501-33809159 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 260 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 90, 39 | 
| Conread position: | 363-703 | 
| Cow position: | chr6:47150035-47149697 (view UCSC Genome Browser custom track) | 
| Alignm length: | 343 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 89, 38 | 
| Conread position: | 364-534 | 
| Cow position: | chr6:10680628-10680459 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 85, 38 | 
| Conread position: | 370-703 | 
| Cow position: | chr6:35600620-35600954 (view UCSC Genome Browser custom track) | 
| Alignm length: | 336 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 82, 32 | 
| Conread position: | 373-703 | 
| Cow position: | chr6:38438550-38438881 (view UCSC Genome Browser custom track) | 
| Alignm length: | 333 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 79, 38 | 
| Conread position: | 377-703 | 
| Cow position: | chr6:65892920-65892597 (view UCSC Genome Browser custom track) | 
| Alignm length: | 328 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 75, 12 | 
| Conread position: | 385-703 | 
| Cow position: | chr6:7105573-7105257 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 17 | 
| Conread position: | 388-703 | 
| Cow position: | chr6:1796586-1796900 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 64, 14 | 
| Conread position: | 401-707 | 
| Cow position: | chr6:14897155-14897461 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 8e-37 | 
| Alignm gaps (pig, cow): | 171, 60 | 
| Conread position: | 421-703 | 
| Cow position: | chr6:21711695-21711981 (view UCSC Genome Browser custom track) | 
| Alignm length: | 287 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 36, 0 | 
| Conread position: | 421-703 | 
| Cow position: | chr6:43039076-43038796 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 31, 55 | 
| Conread position: | 423-630 | 
| Cow position: | chr6:7921044-7920834 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 36, 194 | 
| Conread position: | 425-703 | 
| Cow position: | chr6:28481332-28481603 (view UCSC Genome Browser custom track) | 
| Alignm length: | 281 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 27, 46 | 
| Conread position: | 458-712 | 
| Cow position: | chr6:18987172-18987420 (view UCSC Genome Browser custom track) | 
| Alignm length: | 257 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 114, 77 | 
| Conread position: | 496-712 | 
| Cow position: | chr6:10681061-10681274 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 5e-33 | 
| Alignm gaps (pig, cow): | 49, 33 | 
| Conread position: | 529-712 | 
| Cow position: | chr6:19044314-19044496 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 43, 112 | 
Show alignments to all cow chromosomes.
