Cow genome map

Conread name: Ova1-OVRM10224H10

Conread position: 1-167
Cow position: chrX:34093427-34093256 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 45, 17

Conread position: 1-181
Cow position: chrX:30437307-30437492 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 86, 17

Conread position: 1-198
Cow position: chrX:12652091-12651889 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 86, 17

Conread position: 1-208
Cow position: chrX:21492569-21492781 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 162
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 87, 17

Conread position: 1-260
Cow position: chrX:6196632-6196369 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 201
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 86, 17

Conread position: 1-296
Cow position: chrX:13244058-13244362 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-334
Cow position: chrX:16086025-16086368 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-343
Cow position: chrX:21767032-21767388 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 17

Conread position: 1-344
Cow position: chrX:2117990-2117634 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-344
Cow position: chrX:20741228-20740873 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 17

Conread position: 1-438
Cow position: chrX:5281383-5280939 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-468
Cow position: chrX:30167674-30167204 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 17

Conread position: 1-595
Cow position: chrX:13072046-13071441 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-595
Cow position: chrX:13092606-13092001 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-611
Cow position: chrX:43437504-43436879 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-639
Cow position: chrX:11458410-11457766 (view UCSC Genome Browser custom track)
Alignm length: 665
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 17

Conread position: 1-645
Cow position: chrX:5298841-5298186 (view UCSC Genome Browser custom track)
Alignm length: 664
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-703
Cow position: chrX:3082738-3082018 (view UCSC Genome Browser custom track)
Alignm length: 736
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 17

Conread position: 1-703
Cow position: chrX:5360409-5361122 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 18

Conread position: 1-703
Cow position: chrX:5865544-5866258 (view UCSC Genome Browser custom track)
Alignm length: 723
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 17

Conread position: 1-703
Cow position: chrX:8481851-8482559 (view UCSC Genome Browser custom track)
Alignm length: 726
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 17

Conread position: 1-703
Cow position: chrX:10529387-10528674 (view UCSC Genome Browser custom track)
Alignm length: 724
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 15

Conread position: 1-703
Cow position: chrX:11462594-11461883 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 17

Conread position: 1-703
Cow position: chrX:12144498-12145211 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-703
Cow position: chrX:12308363-12307650 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 17

Conread position: 1-703
Cow position: chrX:13406886-13406174 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 17

Conread position: 1-703
Cow position: chrX:13929334-13928630 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-703
Cow position: chrX:15978552-15977841 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-703
Cow position: chrX:16045371-16046085 (view UCSC Genome Browser custom track)
Alignm length: 723
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 17

Conread position: 1-703
Cow position: chrX:16781685-16782392 (view UCSC Genome Browser custom track)
Alignm length: 724
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 17

Conread position: 1-703
Cow position: chrX:16804466-16803755 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 17

Conread position: 1-703
Cow position: chrX:16809413-16808702 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 17

Conread position: 1-703
Cow position: chrX:18657405-18656693 (view UCSC Genome Browser custom track)
Alignm length: 721
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-703
Cow position: chrX:19398176-19398890 (view UCSC Genome Browser custom track)
Alignm length: 723
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 11

Conread position: 1-703
Cow position: chrX:19474749-19474036 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 15

Conread position: 1-703
Cow position: chrX:19608076-19608787 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-703
Cow position: chrX:20357600-20356883 (view UCSC Genome Browser custom track)
Alignm length: 726
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-703
Cow position: chrX:22565285-22564570 (view UCSC Genome Browser custom track)
Alignm length: 724
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 17

Conread position: 1-703
Cow position: chrX:22611809-22612515 (view UCSC Genome Browser custom track)
Alignm length: 724
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-703
Cow position: chrX:24468723-24468011 (view UCSC Genome Browser custom track)
Alignm length: 723
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 17

Conread position: 1-703
Cow position: chrX:26231359-26230646 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 544
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 17

Conread position: 1-703
Cow position: chrX:27423868-27423170 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 17

Conread position: 1-703
Cow position: chrX:28753937-28753224 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 17

Conread position: 1-703
Cow position: chrX:29098825-29099529 (view UCSC Genome Browser custom track)
Alignm length: 716
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 17

Conread position: 1-703
Cow position: chrX:29911734-29912451 (view UCSC Genome Browser custom track)
Alignm length: 728
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 17

Conread position: 1-703
Cow position: chrX:30054067-30053356 (view UCSC Genome Browser custom track)
Alignm length: 720
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 17

Conread position: 1-703
Cow position: chrX:36536330-36535619 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 17

Conread position: 1-703
Cow position: chrX:39712953-39713663 (view UCSC Genome Browser custom track)
Alignm length: 721
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 17

Conread position: 1-708
Cow position: chrX:2814077-2813367 (view UCSC Genome Browser custom track)
Alignm length: 729
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 17

Conread position: 5-703
Cow position: chrX:7754306-7755018 (view UCSC Genome Browser custom track)
Alignm length: 718
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 252

Conread position: 7-703
Cow position: chrX:22492441-22493143 (view UCSC Genome Browser custom track)
Alignm length: 716
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 13

Conread position: 8-703
Cow position: chrX:5333029-5332321 (view UCSC Genome Browser custom track)
Alignm length: 715
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 359

Conread position: 9-540
Cow position: chrX:35023149-35023674 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 123

Conread position: 9-703
Cow position: chrX:12359294-12360000 (view UCSC Genome Browser custom track)
Alignm length: 715
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 242

Conread position: 9-703
Cow position: chrX:31495143-31495849 (view UCSC Genome Browser custom track)
Alignm length: 714
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 169

Conread position: 13-299
Cow position: chrX:45417194-45416895 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 217
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 66, 114

Conread position: 13-571
Cow position: chrX:6247793-6247234 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 24

Conread position: 14-156
Cow position: chrX:21661652-21661501 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 71, 0

Conread position: 14-172
Cow position: chrX:38229340-38229175 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 49, 0

Conread position: 14-296
Cow position: chrX:27615082-27615376 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 198

Conread position: 14-344
Cow position: chrX:3156107-3155761 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 249
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 71, 105

Conread position: 14-382
Cow position: chrX:359928-360320 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 362

Conread position: 14-432
Cow position: chrX:23453643-23453213 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 154

Conread position: 14-485
Cow position: chrX:12312589-12312108 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 349

Conread position: 14-542
Cow position: chrX:3465952-3465411 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 14

Conread position: 14-696
Cow position: chrX:12185493-12186206 (view UCSC Genome Browser custom track)
Alignm length: 719
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 372

Conread position: 14-698
Cow position: chrX:29941589-29942265 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 315

Conread position: 14-699
Cow position: chrX:26442840-26442143 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 331

Conread position: 14-703
Cow position: chrX:4767106-4767808 (view UCSC Genome Browser custom track)
Alignm length: 713
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 363

Conread position: 14-703
Cow position: chrX:6855259-6854606 (view UCSC Genome Browser custom track)
Alignm length: 697
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 87

Conread position: 14-703
Cow position: chrX:10867443-10866750 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 251

Conread position: 14-703
Cow position: chrX:14782937-14782233 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 358

Conread position: 14-703
Cow position: chrX:17890952-17891658 (view UCSC Genome Browser custom track)
Alignm length: 714
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 36

Conread position: 14-703
Cow position: chrX:22818483-22819190 (view UCSC Genome Browser custom track)
Alignm length: 714
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 331

Conread position: 14-703
Cow position: chrX:23388139-23387426 (view UCSC Genome Browser custom track)
Alignm length: 723
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 368

Conread position: 14-703
Cow position: chrX:23573397-23572705 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 45

Conread position: 14-703
Cow position: chrX:31727885-31728580 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 241

Conread position: 14-708
Cow position: chrX:5294936-5294231 (view UCSC Genome Browser custom track)
Alignm length: 716
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 277

Conread position: 14-710
Cow position: chrX:33829453-33830161 (view UCSC Genome Browser custom track)
Alignm length: 717
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 180

Conread position: 14-711
Cow position: chrX:23021728-23022438 (view UCSC Genome Browser custom track)
Alignm length: 717
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 132

Conread position: 14-712
Cow position: chrX:21225889-21226604 (view UCSC Genome Browser custom track)
Alignm length: 723
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 353

Conread position: 15-176
Cow position: chrX:12666919-12666749 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 73, 0

Conread position: 15-218
Cow position: chrX:19401401-19401613 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 162
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 73, 0

Conread position: 15-220
Cow position: chrX:38963304-38963089 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 160
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 73, 0

Conread position: 15-245
Cow position: chrX:2047495-2047738 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 182
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 73, 0

Conread position: 15-342
Cow position: chrX:6280386-6280065 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 83

Conread position: 15-446
Cow position: chrX:37814560-37815004 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 352

Conread position: 15-453
Cow position: chrX:9086123-9086570 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 116

Conread position: 15-473
Cow position: chrX:12345348-12345823 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 355

Conread position: 15-542
Cow position: chrX:3418808-3418267 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 243

Conread position: 15-550
Cow position: chrX:5549790-5550339 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 352

Conread position: 15-580
Cow position: chrX:29094905-29094329 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 348

Conread position: 15-582
Cow position: chrX:12464418-12464999 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 22

Conread position: 15-586
Cow position: chrX:21646871-21646284 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 254

Conread position: 15-703
Cow position: chrX:672582-671881 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 249

Conread position: 15-703
Cow position: chrX:2578831-2579531 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 356

Conread position: 15-703
Cow position: chrX:3360234-3360933 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 27

Conread position: 15-703
Cow position: chrX:11146929-11146221 (view UCSC Genome Browser custom track)
Alignm length: 713
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 360

Conread position: 15-703
Cow position: chrX:14125834-14125132 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 341

Conread position: 15-703
Cow position: chrX:14461728-14462427 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 131

Conread position: 15-703
Cow position: chrX:14597266-14597958 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 357

Conread position: 15-703
Cow position: chrX:15261207-15260507 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 358

Conread position: 15-703
Cow position: chrX:17053980-17054680 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 352

Conread position: 15-703
Cow position: chrX:18221824-18222526 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 136

Conread position: 15-703
Cow position: chrX:21342815-21343507 (view UCSC Genome Browser custom track)
Alignm length: 701
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 27

Conread position: 15-703
Cow position: chrX:21591702-21592404 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 553
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 195

Conread position: 15-703
Cow position: chrX:24412439-24413139 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 27

Conread position: 15-703
Cow position: chrX:24770445-24769744 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 350

Conread position: 15-703
Cow position: chrX:27304352-27305041 (view UCSC Genome Browser custom track)
Alignm length: 700
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 89

Conread position: 15-703
Cow position: chrX:28587391-28588082 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 353

Conread position: 15-703
Cow position: chrX:29891519-29892199 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 31

Conread position: 15-703
Cow position: chrX:31979424-31978729 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 106

Conread position: 15-703
Cow position: chrX:35532269-35532967 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 115

Conread position: 15-703
Cow position: chrX:37851555-37852248 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 144

Conread position: 15-703
Cow position: chrX:42732291-42732984 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 175

Conread position: 15-705
Cow position: chrX:32064758-32064054 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 352

Conread position: 15-706
Cow position: chrX:2560538-2559846 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 348

Conread position: 15-712
Cow position: chrX:28606673-28605963 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 35

Conread position: 16-702
Cow position: chrX:12997498-12996799 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 10

Conread position: 18-279
Cow position: chrX:12178583-12178307 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 206
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 67, 191

Conread position: 18-683
Cow position: chrX:24444657-24443963 (view UCSC Genome Browser custom track)
Alignm length: 700
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 100

Conread position: 18-702
Cow position: chrX:4906580-4905876 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 351

Conread position: 18-703
Cow position: chrX:2480216-2479516 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 349

Conread position: 18-703
Cow position: chrX:7552393-7551689 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 358

Conread position: 18-703
Cow position: chrX:11977033-11976334 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 16

Conread position: 18-703
Cow position: chrX:15122749-15122049 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 359

Conread position: 18-703
Cow position: chrX:16702097-16702783 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 269

Conread position: 18-703
Cow position: chrX:18951318-18950624 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 325

Conread position: 18-703
Cow position: chrX:21388997-21389690 (view UCSC Genome Browser custom track)
Alignm length: 701
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 43

Conread position: 18-703
Cow position: chrX:21581855-21582555 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 129

Conread position: 18-703
Cow position: chrX:22539624-22538921 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 352

Conread position: 18-703
Cow position: chrX:23279440-23280136 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 10

Conread position: 18-703
Cow position: chrX:23395019-23395719 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 352

Conread position: 18-703
Cow position: chrX:26756227-26755529 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 349

Conread position: 18-703
Cow position: chrX:29916930-29916233 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 19

Conread position: 18-703
Cow position: chrX:30164816-30164126 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 149

Conread position: 18-703
Cow position: chrX:30229699-30229001 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 354

Conread position: 18-709
Cow position: chrX:5247806-5248503 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 234

Conread position: 18-712
Cow position: chrX:27591608-27590903 (view UCSC Genome Browser custom track)
Alignm length: 714
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 349

Conread position: 18-712
Cow position: chrX:30090611-30089919 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 41

Conread position: 21-360
Cow position: chrX:26749848-26749496 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 238
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 33, 41

Conread position: 21-386
Cow position: chrX:35027732-35028097 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 59

Conread position: 21-392
Cow position: chrX:22126358-22125985 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 260

Conread position: 21-422
Cow position: chrX:47215198-47214795 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 16

Conread position: 21-441
Cow position: chrX:17664782-17664348 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 347

Conread position: 21-538
Cow position: chrX:21751079-21750563 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 59

Conread position: 21-583
Cow position: chrX:3406920-3406336 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 231

Conread position: 21-586
Cow position: chrX:29878109-29877540 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 233

Conread position: 21-592
Cow position: chrX:20363717-20363135 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 108

Conread position: 21-626
Cow position: chrX:30316606-30317201 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 40

Conread position: 21-643
Cow position: chrX:5640460-5639838 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 81

Conread position: 21-648
Cow position: chrX:24463019-24462380 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 342

Conread position: 21-662
Cow position: chrX:29791386-29790744 (view UCSC Genome Browser custom track)
Alignm length: 660
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 229

Conread position: 21-702
Cow position: chrX:26623387-26622697 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 231

Conread position: 21-703
Cow position: chrX:2381881-2382579 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 336

Conread position: 21-703
Cow position: chrX:16036093-16035396 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 342

Conread position: 21-703
Cow position: chrX:22810311-22811002 (view UCSC Genome Browser custom track)
Alignm length: 703
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 348

Conread position: 21-703
Cow position: chrX:23039566-23038872 (view UCSC Genome Browser custom track)
Alignm length: 701
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 232

Conread position: 21-703
Cow position: chrX:26274561-26275251 (view UCSC Genome Browser custom track)
Alignm length: 698
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 298

Conread position: 21-703
Cow position: chrX:27317646-27318343 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 345

Conread position: 21-703
Cow position: chrX:29171365-29170669 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 346

Conread position: 21-703
Cow position: chrX:30181509-30180812 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 348

Conread position: 21-703
Cow position: chrX:31201259-31201953 (view UCSC Genome Browser custom track)
Alignm length: 701
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 38

Conread position: 21-703
Cow position: chrX:36194511-36195208 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 346

Conread position: 21-703
Cow position: chrX:43074328-43074995 (view UCSC Genome Browser custom track)
Alignm length: 694
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 73

Conread position: 21-708
Cow position: chrX:29765424-29766119 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 194

Conread position: 21-712
Cow position: chrX:30137439-30136739 (view UCSC Genome Browser custom track)
Alignm length: 718
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 14

Conread position: 21-712
Cow position: chrX:39697184-39697890 (view UCSC Genome Browser custom track)
Alignm length: 713
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 244

Conread position: 21-712
Cow position: chrX:41848100-41847403 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 31

Conread position: 22-648
Cow position: chrX:13416010-13415385 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 174

Conread position: 22-703
Cow position: chrX:9095063-9095755 (view UCSC Genome Browser custom track)
Alignm length: 697
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 341

Conread position: 24-206
Cow position: chrX:47381248-47381058 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 146
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 59, 115

Conread position: 24-521
Cow position: chrX:38150018-38150526 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 265

Conread position: 25-468
Cow position: chrX:20725390-20725846 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 337

Conread position: 28-703
Cow position: chrX:1549395-1550077 (view UCSC Genome Browser custom track)
Alignm length: 690
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 9

Conread position: 28-703
Cow position: chrX:16854934-16854253 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 9

Conread position: 29-514
Cow position: chrX:13431510-13431013 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 243

Conread position: 30-398
Cow position: chrX:20133729-20133370 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 258
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 60, 187

Conread position: 30-527
Cow position: chrX:9260779-9261286 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 98

Conread position: 30-703
Cow position: chrX:23134023-23134701 (view UCSC Genome Browser custom track)
Alignm length: 690
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 335

Conread position: 30-703
Cow position: chrX:27595802-27595114 (view UCSC Genome Browser custom track)
Alignm length: 694
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 334

Conread position: 30-708
Cow position: chrX:28519288-28518603 (view UCSC Genome Browser custom track)
Alignm length: 699
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 334

Conread position: 30-712
Cow position: chrX:16278080-16278779 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 341

Conread position: 31-569
Cow position: chrX:13281892-13282444 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 181

Conread position: 33-415
Cow position: chrX:40694271-40693880 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 330

Conread position: 33-587
Cow position: chrX:21317887-21318448 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 26

Conread position: 33-621
Cow position: chrX:21627992-21627408 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 145

Conread position: 33-624
Cow position: chrX:5426517-5427124 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 335

Conread position: 34-550
Cow position: chrX:22837412-22837940 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 25

Conread position: 35-703
Cow position: chrX:27983923-27983241 (view UCSC Genome Browser custom track)
Alignm length: 691
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 27

Conread position: 37-429
Cow position: chrX:14459975-14459569 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 336

Conread position: 39-429
Cow position: chrX:15142723-15142324 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 11

Conread position: 42-577
Cow position: chrX:39388017-39387482 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 348
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 38, 87

Conread position: 45-563
Cow position: chrX:2487092-2487614 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 173

Conread position: 45-703
Cow position: chrX:9010773-9011443 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 322

Conread position: 45-703
Cow position: chrX:39561220-39560547 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 213

Conread position: 46-269
Cow position: chrX:29758985-29758749 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 170
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 41, 0

Conread position: 48-703
Cow position: chrX:21793033-21793702 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 319

Conread position: 49-703
Cow position: chrX:25450778-25451450 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 319

Conread position: 51-703
Cow position: chrX:6580380-6581047 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 316

Conread position: 53-703
Cow position: chrX:4623506-4622841 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 319

Conread position: 62-703
Cow position: chrX:2009233-2008586 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 12

Conread position: 64-666
Cow position: chrX:11951294-11950695 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 201

Conread position: 64-703
Cow position: chrX:15622073-15621419 (view UCSC Genome Browser custom track)
Alignm length: 659
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 303

Conread position: 64-703
Cow position: chrX:16360544-16359895 (view UCSC Genome Browser custom track)
Alignm length: 659
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 298

Conread position: 66-645
Cow position: chrX:38153238-38152667 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 18

Conread position: 70-603
Cow position: chrX:387613-388145 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 345
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 33, 11

Conread position: 76-703
Cow position: chrX:5321231-5320604 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 21

Conread position: 79-688
Cow position: chrX:4557819-4558417 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 136

Conread position: 82-591
Cow position: chrX:39564807-39564287 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 39

Conread position: 86-703
Cow position: chrX:7484297-7484919 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 11

Conread position: 87-344
Cow position: chrX:36690965-36690693 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 197
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 15, 193

Conread position: 87-392
Cow position: chrX:3144301-3144601 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 226
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 16, 38

Conread position: 87-463
Cow position: chrX:18243863-18243480 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 66

Conread position: 87-633
Cow position: chrX:16023568-16024113 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 14

Conread position: 87-703
Cow position: chrX:24589239-24588622 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 273

Conread position: 87-708
Cow position: chrX:8640277-8640905 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 277

Conread position: 87-712
Cow position: chrX:21832381-21833011 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 114

Conread position: 88-505
Cow position: chrX:16407043-16407465 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 262
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 14, 57

Conread position: 88-628
Cow position: chrX:4327196-4326643 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 55

Conread position: 88-645
Cow position: chrX:20651914-20652470 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 37

Conread position: 88-703
Cow position: chrX:16525295-16525902 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 33

Conread position: 89-348
Cow position: chrX:26507748-26508009 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 182
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 14, 38

Conread position: 90-342
Cow position: chrX:34006735-34006486 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 204

Conread position: 90-703
Cow position: chrX:30166167-30165550 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 111

Conread position: 93-712
Cow position: chrX:40828600-40827984 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 73

Conread position: 94-703
Cow position: chrX:3373355-3372740 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 261

Conread position: 94-703
Cow position: chrX:5354804-5354190 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 270

Conread position: 98-703
Cow position: chrX:32145755-32145143 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 265

Conread position: 101-703
Cow position: chrX:29908706-29908090 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 265

Conread position: 102-703
Cow position: chrX:10413458-10412863 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 189

Conread position: 102-703
Cow position: chrX:16710474-16711068 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 177

Conread position: 103-701
Cow position: chrX:23222522-23221932 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 260

Conread position: 104-573
Cow position: chrX:11074640-11074181 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 98

Conread position: 105-631
Cow position: chrX:24175437-24174909 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 255

Conread position: 110-703
Cow position: chrX:17782018-17782612 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 170

Conread position: 111-497
Cow position: chrX:34552906-34553293 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 250

Conread position: 113-703
Cow position: chrX:4342268-4342863 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 250

Conread position: 113-703
Cow position: chrX:22077823-22077230 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 20

Conread position: 113-712
Cow position: chrX:6236323-6235724 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 142

Conread position: 114-703
Cow position: chrX:21892026-21892620 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 121

Conread position: 116-703
Cow position: chrX:322425-323026 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 257

Conread position: 117-427
Cow position: chrX:28648361-28648047 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 244

Conread position: 123-686
Cow position: chrX:18462876-18463446 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 241

Conread position: 129-431
Cow position: chrX:22577915-22577615 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 221
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 90, 137

Conread position: 129-646
Cow position: chrX:28667417-28666906 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 329
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 94, 160

Conread position: 137-703
Cow position: chrX:26530515-26531085 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 144

Conread position: 138-611
Cow position: chrX:302663-303137 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 308
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 65, 117

Conread position: 142-703
Cow position: chrX:7120153-7120719 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 216

Conread position: 143-592
Cow position: chrX:41880575-41880122 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 220

Conread position: 143-712
Cow position: chrX:24734216-24734788 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 111

Conread position: 144-712
Cow position: chrX:26446647-26447213 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 203

Conread position: 145-703
Cow position: chrX:3581486-3582047 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 215

Conread position: 146-707
Cow position: chrX:37487497-37488067 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 48

Conread position: 149-703
Cow position: chrX:29225030-29225590 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 209

Conread position: 150-587
Cow position: chrX:19877384-19877838 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 213

Conread position: 154-700
Cow position: chrX:15349647-15349104 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 298, 164

Conread position: 162-703
Cow position: chrX:26617696-26618236 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 196

Conread position: 164-703
Cow position: chrX:34094273-34094818 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 194

Conread position: 165-703
Cow position: chrX:35287014-35287538 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 100

Conread position: 166-708
Cow position: chrX:7096026-7096576 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 194

Conread position: 170-652
Cow position: chrX:38588338-38587853 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 191

Conread position: 170-703
Cow position: chrX:27497405-27497941 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 193

Conread position: 174-703
Cow position: chrX:9127632-9128167 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 189

Conread position: 174-712
Cow position: chrX:9170028-9169478 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 184

Conread position: 175-703
Cow position: chrX:39547981-39548511 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 183

Conread position: 178-618
Cow position: chrX:45112388-45112828 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 180

Conread position: 178-703
Cow position: chrX:20800370-20800901 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 180

Conread position: 178-703
Cow position: chrX:29880698-29880168 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 177

Conread position: 178-703
Cow position: chrX:30436037-30435505 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 180

Conread position: 178-703
Cow position: chrX:30965405-30964874 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 180

Conread position: 180-505
Cow position: chrX:4481280-4481612 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 182

Conread position: 185-407
Cow position: chrX:4063668-4063446 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 160
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 33, 83

Conread position: 191-692
Cow position: chrX:32129374-32129878 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 109

Conread position: 191-703
Cow position: chrX:16041082-16040567 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 63

Conread position: 192-703
Cow position: chrX:30059492-30059999 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 78

Conread position: 194-703
Cow position: chrX:11409737-11409222 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 169

Conread position: 195-530
Cow position: chrX:2501187-2501526 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 152

Conread position: 198-703
Cow position: chrX:21767409-21767912 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 151

Conread position: 200-543
Cow position: chrX:24928398-24928746 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 158

Conread position: 201-703
Cow position: chrX:28879973-28879471 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 158

Conread position: 203-504
Cow position: chrX:46295974-46296278 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 155

Conread position: 205-712
Cow position: chrX:42223142-42222646 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 154

Conread position: 213-703
Cow position: chrX:6044826-6044348 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 331
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 87, 36

Conread position: 214-562
Cow position: chrX:30135693-30135342 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 141

Conread position: 214-703
Cow position: chrX:41155932-41156423 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 146

Conread position: 216-712
Cow position: chrX:37080891-37080391 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 138

Conread position: 221-516
Cow position: chrX:22119377-22119081 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 12

Conread position: 221-533
Cow position: chrX:10410438-10410129 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 208
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 53, 64

Conread position: 221-703
Cow position: chrX:8435570-8435090 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 138

Conread position: 221-712
Cow position: chrX:28132733-28133225 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 5

Conread position: 222-542
Cow position: chrX:1948800-1948479 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 137

Conread position: 222-702
Cow position: chrX:21494065-21494527 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 137

Conread position: 222-703
Cow position: chrX:22579747-22579275 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 127

Conread position: 222-703
Cow position: chrX:24321998-24321516 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 98

Conread position: 222-703
Cow position: chrX:30836016-30836499 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 132

Conread position: 224-703
Cow position: chrX:22616743-22616259 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 136

Conread position: 227-703
Cow position: chrX:18024358-18023880 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 123

Conread position: 228-444
Cow position: chrX:31972486-31972274 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 150
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 78, 36

Conread position: 228-619
Cow position: chrX:30286046-30286434 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 126

Conread position: 228-703
Cow position: chrX:7572026-7572503 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 120

Conread position: 228-703
Cow position: chrX:38962214-38961738 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 125

Conread position: 237-707
Cow position: chrX:34221424-34221875 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 121

Conread position: 240-703
Cow position: chrX:5290037-5289572 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 115

Conread position: 240-703
Cow position: chrX:24293016-24292551 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 113

Conread position: 240-712
Cow position: chrX:40070956-40070484 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 21

Conread position: 241-703
Cow position: chrX:2047765-2048224 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 35

Conread position: 241-703
Cow position: chrX:27754073-27754540 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 116

Conread position: 242-645
Cow position: chrX:2184889-2185279 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 283
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 60, 108

Conread position: 242-703
Cow position: chrX:25818166-25817707 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 60

Conread position: 244-703
Cow position: chrX:24345700-24346161 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 115

Conread position: 255-703
Cow position: chrX:38231606-38231155 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 105

Conread position: 267-505
Cow position: chrX:41305514-41305275 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 176
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 31, 87

Conread position: 267-626
Cow position: chrX:9067745-9068100 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 238
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 185, 86

Conread position: 268-703
Cow position: chrX:9535219-9535655 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 8

Conread position: 268-703
Cow position: chrX:9836588-9837027 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 8

Conread position: 268-703
Cow position: chrX:24316491-24316934 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 86

Conread position: 270-703
Cow position: chrX:29082753-29083179 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 84

Conread position: 272-595
Cow position: chrX:4134234-4133910 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 87

Conread position: 273-703
Cow position: chrX:29759381-29759800 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 81

Conread position: 276-472
Cow position: chrX:39694492-39694684 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 149
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 24, 76

Conread position: 293-613
Cow position: chrX:45042377-45042068 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 13

Conread position: 300-533
Cow position: chrX:15176426-15176196 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 177
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 152, 50

Conread position: 300-703
Cow position: chrX:5375565-5375165 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 55

Conread position: 300-703
Cow position: chrX:20741569-20741965 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 56

Conread position: 300-703
Cow position: chrX:23342280-23341879 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 45

Conread position: 300-703
Cow position: chrX:27615524-27615924 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 55

Conread position: 300-703
Cow position: chrX:29287707-29288111 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 52

Conread position: 301-703
Cow position: chrX:30200275-30199880 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 49

Conread position: 302-591
Cow position: chrX:25449199-25449488 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 194
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 151, 14

Conread position: 302-699
Cow position: chrX:5365877-5365486 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 16

Conread position: 307-703
Cow position: chrX:18193409-18193802 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 10

Conread position: 309-652
Cow position: chrX:15590706-15590371 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 35

Conread position: 313-610
Cow position: chrX:37839872-37840167 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 42

Conread position: 314-703
Cow position: chrX:3650102-3649707 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 41

Conread position: 314-705
Cow position: chrX:20953257-20953647 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 89

Conread position: 314-712
Cow position: chrX:19396957-19397353 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 257
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 131, 29

Conread position: 316-626
Cow position: chrX:41906004-41905695 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 214
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 136, 8

Conread position: 325-622
Cow position: chrX:21661754-21662056 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 225
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 124, 30

Conread position: 325-703
Cow position: chrX:5647368-5646992 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 30

Conread position: 325-703
Cow position: chrX:23985986-23986362 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 30

Conread position: 326-643
Cow position: chrX:31964667-31964978 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 22

Conread position: 327-703
Cow position: chrX:36691580-36691945 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 77

Conread position: 337-703
Cow position: chrX:6656269-6655908 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 15

Conread position: 349-703
Cow position: chrX:29849860-29849511 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 52

Conread position: 351-703
Cow position: chrX:15151908-15151553 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 85

Conread position: 352-703
Cow position: chrX:38228549-38228205 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 8

Conread position: 354-703
Cow position: chrX:21685372-21685731 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 188

Conread position: 355-586
Cow position: chrX:17228738-17228967 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 46

Conread position: 355-644
Cow position: chrX:13912179-13911892 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 204
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 115, 56

Conread position: 355-680
Cow position: chrX:864871-865195 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 46

Conread position: 355-703
Cow position: chrX:6371943-6372292 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 46

Conread position: 355-703
Cow position: chrX:7276727-7277071 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 237
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 78, 46

Conread position: 355-703
Cow position: chrX:9642665-9642320 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 46

Conread position: 355-703
Cow position: chrX:14802056-14801707 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 46

Conread position: 355-703
Cow position: chrX:16085895-16085546 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 46

Conread position: 355-703
Cow position: chrX:21414630-21414979 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 46

Conread position: 355-703
Cow position: chrX:27758472-27758821 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 46

Conread position: 355-703
Cow position: chrX:34760829-34761178 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 36

Conread position: 355-712
Cow position: chrX:21818685-21818337 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 309, 31

Conread position: 357-704
Cow position: chrX:28633689-28633340 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 44

Conread position: 360-626
Cow position: chrX:502919-502652 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 185
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 61, 42

Conread position: 360-703
Cow position: chrX:22869587-22869931 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 41

Conread position: 360-703
Cow position: chrX:44193668-44193324 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 40

Conread position: 361-636
Cow position: chrX:42042576-42042301 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 177
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 91, 40

Conread position: 362-703
Cow position: chrX:9228131-9227791 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 50

Conread position: 362-703
Cow position: chrX:20020342-20020691 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 39

Conread position: 362-703
Cow position: chrX:30172936-30172594 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 39

Conread position: 364-627
Cow position: chrX:23523021-23522766 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 178
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 89, 50

Conread position: 374-710
Cow position: chrX:6279821-6279478 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 28

Conread position: 377-643
Cow position: chrX:31378726-31378994 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 181
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 82, 25

Conread position: 378-712
Cow position: chrX:13056812-13057149 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 238
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 74, 197

Conread position: 379-712
Cow position: chrX:38998634-38998960 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 23

Conread position: 381-565
Cow position: chrX:900841-900656 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 14, 24

Conread position: 382-706
Cow position: chrX:8104716-8104393 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 20

Conread position: 387-550
Cow position: chrX:32585274-32585113 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 127
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 65, 15

Conread position: 388-707
Cow position: chrX:6453494-6453813 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 23

Conread position: 394-532
Cow position: chrX:42009396-42009534 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 58, 8

Conread position: 396-703
Cow position: chrX:4406689-4406995 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 6

Conread position: 396-703
Cow position: chrX:34442624-34442320 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 6

Conread position: 396-703
Cow position: chrX:45401198-45400907 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 215
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 56, 6

Conread position: 397-703
Cow position: chrX:6201337-6201642 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 201

Conread position: 401-657
Cow position: chrX:27028939-27029196 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 206

Conread position: 402-609
Cow position: chrX:721668-721877 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 403-633
Cow position: chrX:15569066-15568834 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 161
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 172, 196

Conread position: 421-712
Cow position: chrX:16465135-16465428 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 423-712
Cow position: chrX:15140700-15140409 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Show alignments to all cow chromosomes.