Cow genome map

Conread name: Ova1-OVRM10225D07

Conread position: 3-534
Cow position: chr11:8266323-8266866 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 79

Conread position: 3-690
Cow position: chr11:2568165-2567468 (view UCSC Genome Browser custom track)
Alignm length: 721
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 79

Conread position: 4-188
Cow position: chr11:28667044-28667232 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 15, 76

Conread position: 4-192
Cow position: chr11:23882545-23882738 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 149
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 11, 156

Conread position: 4-196
Cow position: chr11:21853626-21853430 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 150
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 19, 150

Conread position: 4-199
Cow position: chr11:26747660-26747857 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 138
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 94, 141

Conread position: 4-202
Cow position: chr11:9154677-9154478 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 158
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 18, 141

Conread position: 4-208
Cow position: chr11:14734871-14734661 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 153
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 16, 159

Conread position: 4-208
Cow position: chr11:38701881-38702091 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 160
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 16, 156

Conread position: 4-212
Cow position: chr11:14260538-14260327 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 166
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 18, 52

Conread position: 4-217
Cow position: chr11:27937913-27938124 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 161
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 11, 67

Conread position: 4-225
Cow position: chr11:30254740-30254955 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 168
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 16, 148

Conread position: 4-228
Cow position: chr11:39585212-39584984 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 173
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 16, 156

Conread position: 4-231
Cow position: chr11:30104683-30104451 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 175
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 16, 157

Conread position: 4-242
Cow position: chr11:5280544-5280788 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 174
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 18, 160

Conread position: 4-245
Cow position: chr11:32025386-32025627 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 173
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 16, 91

Conread position: 4-270
Cow position: chr11:13063101-13062830 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 193
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 16, 157

Conread position: 4-270
Cow position: chr11:47737036-47736767 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-306
Cow position: chr11:85731455-85731156 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 220
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 16, 51

Conread position: 4-312
Cow position: chr11:7228763-7229073 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 228
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 18, 161

Conread position: 4-312
Cow position: chr11:17834066-17833758 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 66

Conread position: 4-314
Cow position: chr11:77748289-77748600 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 224
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 18, 70

Conread position: 4-331
Cow position: chr11:25183571-25183909 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 241
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 16, 133

Conread position: 4-348
Cow position: chr11:56652946-56652588 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 186

Conread position: 4-366
Cow position: chr11:15127324-15127686 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 159

Conread position: 4-371
Cow position: chr11:44515265-44514894 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 157

Conread position: 4-374
Cow position: chr11:38068777-38069149 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 152

Conread position: 4-374
Cow position: chr11:77777509-77777143 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 262
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 16, 63

Conread position: 4-391
Cow position: chr11:8242620-8242230 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 257
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 16, 157

Conread position: 4-394
Cow position: chr11:66945825-66945427 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 155

Conread position: 4-423
Cow position: chr11:2534108-2534531 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-429
Cow position: chr11:21887918-21887495 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 283
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 129, 119

Conread position: 4-446
Cow position: chr11:5387981-5388401 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 305
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 16, 102

Conread position: 4-452
Cow position: chr11:8245674-8246126 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-458
Cow position: chr11:28393402-28393844 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 74

Conread position: 4-458
Cow position: chr11:72365697-72366155 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-483
Cow position: chr11:56917494-56917021 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 86

Conread position: 4-483
Cow position: chr11:60223177-60222694 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-483
Cow position: chr11:61848224-61847741 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 161

Conread position: 4-483
Cow position: chr11:79749374-79748890 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 162

Conread position: 4-487
Cow position: chr11:9080045-9079568 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 55

Conread position: 4-493
Cow position: chr11:24395843-24396334 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 159

Conread position: 4-506
Cow position: chr11:35862118-35861639 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 105

Conread position: 4-522
Cow position: chr11:60757464-60756942 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 52

Conread position: 4-532
Cow position: chr11:32478303-32477765 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-532
Cow position: chr11:64353813-64353275 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-542
Cow position: chr11:44516661-44516120 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 157

Conread position: 4-549
Cow position: chr11:41177437-41177980 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 157

Conread position: 4-557
Cow position: chr11:52657146-52656601 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 367
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 16, 42

Conread position: 4-604
Cow position: chr11:21477121-21477700 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 384
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 21, 150

Conread position: 4-608
Cow position: chr11:63653170-63652553 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 155

Conread position: 4-610
Cow position: chr11:50834249-50833633 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 159

Conread position: 4-638
Cow position: chr11:48981805-48982444 (view UCSC Genome Browser custom track)
Alignm length: 656
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 144

Conread position: 4-640
Cow position: chr11:50949468-50950107 (view UCSC Genome Browser custom track)
Alignm length: 661
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 113

Conread position: 4-643
Cow position: chr11:26785765-26786391 (view UCSC Genome Browser custom track)
Alignm length: 658
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 78

Conread position: 4-651
Cow position: chr11:4053802-4053184 (view UCSC Genome Browser custom track)
Alignm length: 655
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 116

Conread position: 4-652
Cow position: chr11:22934088-22933458 (view UCSC Genome Browser custom track)
Alignm length: 661
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 85

Conread position: 4-658
Cow position: chr11:3682325-3681670 (view UCSC Genome Browser custom track)
Alignm length: 673
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 110

Conread position: 4-658
Cow position: chr11:9707657-9708323 (view UCSC Genome Browser custom track)
Alignm length: 673
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 161

Conread position: 4-658
Cow position: chr11:12317561-12316895 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 152

Conread position: 4-663
Cow position: chr11:23494280-23494925 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 160

Conread position: 4-669
Cow position: chr11:18147036-18146357 (view UCSC Genome Browser custom track)
Alignm length: 689
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 211

Conread position: 4-672
Cow position: chr11:7680473-7681147 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 161

Conread position: 4-672
Cow position: chr11:14469035-14469688 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 146

Conread position: 4-672
Cow position: chr11:26549990-26550665 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 157

Conread position: 4-672
Cow position: chr11:31928977-31929626 (view UCSC Genome Browser custom track)
Alignm length: 683
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 43

Conread position: 4-672
Cow position: chr11:40486674-40487342 (view UCSC Genome Browser custom track)
Alignm length: 684
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 23

Conread position: 4-672
Cow position: chr11:41168185-41167505 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 151

Conread position: 4-672
Cow position: chr11:59871323-59871999 (view UCSC Genome Browser custom track)
Alignm length: 689
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 164

Conread position: 4-672
Cow position: chr11:83284405-83285070 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 86

Conread position: 4-672
Cow position: chr11:86578436-86579114 (view UCSC Genome Browser custom track)
Alignm length: 693
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 154

Conread position: 4-674
Cow position: chr11:17280072-17279415 (view UCSC Genome Browser custom track)
Alignm length: 690
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 87

Conread position: 4-685
Cow position: chr11:53429512-53428821 (view UCSC Genome Browser custom track)
Alignm length: 698
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 155

Conread position: 4-685
Cow position: chr11:66731653-66732322 (view UCSC Genome Browser custom track)
Alignm length: 696
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 155

Conread position: 4-686
Cow position: chr11:1505487-1504791 (view UCSC Genome Browser custom track)
Alignm length: 703
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 122

Conread position: 4-686
Cow position: chr11:25809234-25808541 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 155

Conread position: 4-686
Cow position: chr11:30201181-30200490 (view UCSC Genome Browser custom track)
Alignm length: 700
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 150

Conread position: 4-686
Cow position: chr11:57625665-57624981 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 154

Conread position: 4-687
Cow position: chr11:40403251-40402564 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 157

Conread position: 4-688
Cow position: chr11:40773519-40772859 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 92

Conread position: 4-688
Cow position: chr11:71332011-71332710 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 161

Conread position: 4-688
Cow position: chr11:74928309-74928999 (view UCSC Genome Browser custom track)
Alignm length: 700
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 156

Conread position: 4-689
Cow position: chr11:21729496-21728808 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 89

Conread position: 4-689
Cow position: chr11:25564265-25564959 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 156

Conread position: 4-689
Cow position: chr11:29663540-29662851 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 155

Conread position: 4-689
Cow position: chr11:31865127-31865848 (view UCSC Genome Browser custom track)
Alignm length: 729
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 142

Conread position: 4-689
Cow position: chr11:43511462-43510763 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 161

Conread position: 4-690
Cow position: chr11:4024832-4024142 (view UCSC Genome Browser custom track)
Alignm length: 703
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 104

Conread position: 4-690
Cow position: chr11:4267642-4266942 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 52

Conread position: 4-690
Cow position: chr11:10093392-10094081 (view UCSC Genome Browser custom track)
Alignm length: 715
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 128

Conread position: 4-690
Cow position: chr11:10850630-10851326 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 156

Conread position: 4-690
Cow position: chr11:12354384-12353679 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 157

Conread position: 4-690
Cow position: chr11:26122412-26121707 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 166

Conread position: 4-690
Cow position: chr11:33602119-33601426 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 156

Conread position: 4-690
Cow position: chr11:35738833-35738131 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 546
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 161

Conread position: 4-690
Cow position: chr11:38832969-38832266 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 161

Conread position: 4-690
Cow position: chr11:41101435-41102120 (view UCSC Genome Browser custom track)
Alignm length: 703
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 66

Conread position: 4-690
Cow position: chr11:44154568-44153870 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 52

Conread position: 4-690
Cow position: chr11:44254584-44255284 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 52

Conread position: 4-690
Cow position: chr11:44580719-44580021 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 149

Conread position: 4-690
Cow position: chr11:56462870-56463575 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 162

Conread position: 4-690
Cow position: chr11:67296499-67295794 (view UCSC Genome Browser custom track)
Alignm length: 715
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 156

Conread position: 4-690
Cow position: chr11:75511683-75510983 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 152

Conread position: 4-690
Cow position: chr11:85391336-85390649 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 154

Conread position: 4-691
Cow position: chr11:2834785-2835476 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 153

Conread position: 4-691
Cow position: chr11:6342970-6343673 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 152

Conread position: 4-691
Cow position: chr11:8444478-8443777 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-691
Cow position: chr11:10699237-10698532 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 544
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-691
Cow position: chr11:11256581-11257254 (view UCSC Genome Browser custom track)
Alignm length: 699
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-691
Cow position: chr11:15835430-15836127 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-691
Cow position: chr11:20731713-20731009 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-691
Cow position: chr11:28125024-28125727 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 154

Conread position: 4-691
Cow position: chr11:28227270-28226564 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 152

Conread position: 4-691
Cow position: chr11:28693457-28692768 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 78

Conread position: 4-691
Cow position: chr11:38574973-38574271 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 87

Conread position: 4-691
Cow position: chr11:41600179-41599479 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 151

Conread position: 4-691
Cow position: chr11:48168552-48167867 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 125

Conread position: 4-691
Cow position: chr11:49237454-49236760 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 171

Conread position: 4-691
Cow position: chr11:58050411-58049718 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 119

Conread position: 4-691
Cow position: chr11:58136226-58136931 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 152

Conread position: 4-691
Cow position: chr11:61398104-61397407 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 86

Conread position: 4-691
Cow position: chr11:67453164-67453867 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 161

Conread position: 4-691
Cow position: chr11:75402988-75402311 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 76

Conread position: 5-210
Cow position: chr11:31531660-31531858 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 156
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 16, 77

Conread position: 5-234
Cow position: chr11:3790311-3790533 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 169
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 50, 11

Conread position: 5-319
Cow position: chr11:9238615-9238928 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 221
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 19, 133

Conread position: 5-324
Cow position: chr11:15987762-15988081 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 77

Conread position: 5-365
Cow position: chr11:56891705-56891346 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 77

Conread position: 5-413
Cow position: chr11:66859823-66859413 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 89

Conread position: 5-432
Cow position: chr11:10129235-10128824 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 155

Conread position: 5-464
Cow position: chr11:14650276-14650744 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 161

Conread position: 5-656
Cow position: chr11:54727974-54728636 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 52

Conread position: 5-684
Cow position: chr11:59601121-59601785 (view UCSC Genome Browser custom track)
Alignm length: 694
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 71

Conread position: 5-686
Cow position: chr11:11591494-11592180 (view UCSC Genome Browser custom track)
Alignm length: 703
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 155

Conread position: 5-686
Cow position: chr11:76565960-76566670 (view UCSC Genome Browser custom track)
Alignm length: 714
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 190

Conread position: 5-689
Cow position: chr11:17105179-17104494 (view UCSC Genome Browser custom track)
Alignm length: 701
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 155

Conread position: 5-690
Cow position: chr11:19099973-19099272 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 148

Conread position: 5-690
Cow position: chr11:58139220-58139907 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 77

Conread position: 5-691
Cow position: chr11:3495553-3496257 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 160

Conread position: 5-691
Cow position: chr11:7121453-7120735 (view UCSC Genome Browser custom track)
Alignm length: 724
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 155

Conread position: 5-691
Cow position: chr11:17548668-17549372 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 160

Conread position: 5-691
Cow position: chr11:19061564-19060860 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 155

Conread position: 5-691
Cow position: chr11:21897182-21896489 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 105

Conread position: 5-691
Cow position: chr11:27725390-27724687 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 156

Conread position: 5-691
Cow position: chr11:32454571-32455268 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 164

Conread position: 5-691
Cow position: chr11:35142821-35142117 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 157

Conread position: 5-691
Cow position: chr11:35542558-35541856 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 151

Conread position: 5-691
Cow position: chr11:41313806-41314509 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 151

Conread position: 5-691
Cow position: chr11:47973341-47972638 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 155

Conread position: 5-691
Cow position: chr11:50511162-50510459 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 154

Conread position: 5-691
Cow position: chr11:63390966-63390268 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 77

Conread position: 5-691
Cow position: chr11:72368563-72369268 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 155

Conread position: 5-691
Cow position: chr11:73799189-73798488 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 161

Conread position: 5-691
Cow position: chr11:84966624-84967322 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 155

Conread position: 6-554
Cow position: chr11:39600352-39599782 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 157

Conread position: 6-688
Cow position: chr11:11990500-11991210 (view UCSC Genome Browser custom track)
Alignm length: 714
Alignm identity: 549
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 211

Conread position: 6-691
Cow position: chr11:38640462-38641154 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 64

Conread position: 6-691
Cow position: chr11:63861125-63860430 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 155

Conread position: 7-236
Cow position: chr11:84386289-84386063 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 171
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 14, 36

Conread position: 7-314
Cow position: chr11:46781817-46781509 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 42

Conread position: 7-545
Cow position: chr11:52462796-52463335 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 151

Conread position: 7-689
Cow position: chr11:32078267-32077571 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 147

Conread position: 9-247
Cow position: chr11:42309953-42309714 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 167
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 11, 73

Conread position: 13-496
Cow position: chr11:7373971-7374448 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 135

Conread position: 13-677
Cow position: chr11:4205703-4206369 (view UCSC Genome Browser custom track)
Alignm length: 683
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 145

Conread position: 15-672
Cow position: chr11:75553262-75552610 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 425
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 87, 148

Conread position: 16-691
Cow position: chr11:49171975-49171286 (view UCSC Genome Browser custom track)
Alignm length: 697
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 146

Conread position: 21-242
Cow position: chr11:15720192-15719970 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 166
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 80, 126

Conread position: 21-610
Cow position: chr11:26400012-26400607 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 137

Conread position: 21-691
Cow position: chr11:27659779-27660451 (view UCSC Genome Browser custom track)
Alignm length: 699
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 127

Conread position: 22-247
Cow position: chr11:62040988-62041213 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 154
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 78, 131

Conread position: 23-258
Cow position: chr11:72484897-72485130 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 175
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 40, 113

Conread position: 23-373
Cow position: chr11:77747529-77747187 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 242
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 60, 128

Conread position: 23-406
Cow position: chr11:3229654-3230027 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 265
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 81, 132

Conread position: 23-651
Cow position: chr11:10884823-10885441 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 400
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 77, 109

Conread position: 23-691
Cow position: chr11:59005023-59004365 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 148

Conread position: 24-285
Cow position: chr11:8201198-8200938 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 194
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 76, 132

Conread position: 24-382
Cow position: chr11:66739683-66739329 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 28

Conread position: 24-428
Cow position: chr11:4032900-4032507 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 11

Conread position: 24-466
Cow position: chr11:76371532-76371096 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 132

Conread position: 24-679
Cow position: chr11:1493312-1492671 (view UCSC Genome Browser custom track)
Alignm length: 665
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 128

Conread position: 24-691
Cow position: chr11:36930998-36930320 (view UCSC Genome Browser custom track)
Alignm length: 699
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 54

Conread position: 28-666
Cow position: chr11:27922330-27922978 (view UCSC Genome Browser custom track)
Alignm length: 655
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 125

Conread position: 30-377
Cow position: chr11:21648142-21648467 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 227
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 31-349
Cow position: chr11:50136295-50135979 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 211
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 73, 120

Conread position: 31-690
Cow position: chr11:65281559-65282223 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 130

Conread position: 35-663
Cow position: chr11:10958374-10959009 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 117

Conread position: 37-382
Cow position: chr11:83287183-83286839 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 15

Conread position: 37-431
Cow position: chr11:72312995-72313388 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 9

Conread position: 37-599
Cow position: chr11:30190312-30190861 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 10

Conread position: 37-691
Cow position: chr11:33000428-33001085 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 122

Conread position: 41-595
Cow position: chr11:31628075-31628621 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 361
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 62, 133

Conread position: 42-305
Cow position: chr11:12411209-12411474 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 188
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 11, 37

Conread position: 42-430
Cow position: chr11:43992229-43991842 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 266
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 60, 73

Conread position: 42-678
Cow position: chr11:27834207-27833562 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 103

Conread position: 42-683
Cow position: chr11:29012776-29013400 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 36

Conread position: 42-691
Cow position: chr11:30928933-30929596 (view UCSC Genome Browser custom track)
Alignm length: 669
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 119

Conread position: 45-686
Cow position: chr11:7330144-7330758 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 409
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 59, 110

Conread position: 49-558
Cow position: chr11:39483843-39484341 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 335
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 53, 29

Conread position: 52-598
Cow position: chr11:29613953-29614506 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 109

Conread position: 52-690
Cow position: chr11:18921022-18920385 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 26

Conread position: 53-368
Cow position: chr11:53690184-53690484 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 219
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 50, 14

Conread position: 53-691
Cow position: chr11:67920763-67920128 (view UCSC Genome Browser custom track)
Alignm length: 652
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 447, 33

Conread position: 63-395
Cow position: chr11:5982683-5983011 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 25

Conread position: 69-255
Cow position: chr11:32402281-32402095 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 143
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 31, 87

Conread position: 69-431
Cow position: chr11:19072777-19073132 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 243
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 35, 59

Conread position: 69-503
Cow position: chr11:81577325-81576897 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 92

Conread position: 69-690
Cow position: chr11:5482866-5482233 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 58

Conread position: 74-691
Cow position: chr11:39151182-39151814 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 86

Conread position: 78-331
Cow position: chr11:38021889-38021637 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 186
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 24, 83

Conread position: 80-672
Cow position: chr11:16230065-16229465 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 89

Conread position: 98-417
Cow position: chr11:46687612-46687914 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 227
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 80, 54

Conread position: 102-285
Cow position: chr11:37676816-37676994 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 50, 0

Conread position: 102-642
Cow position: chr11:33688404-33687890 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 336, 55

Conread position: 102-691
Cow position: chr11:41261313-41260714 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 50

Conread position: 103-390
Cow position: chr11:10214991-10214713 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 201
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 273, 45

Conread position: 104-691
Cow position: chr11:60824392-60824984 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 39

Conread position: 105-670
Cow position: chr11:73513743-73513186 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 46

Conread position: 107-674
Cow position: chr11:8830155-8829594 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 101

Conread position: 107-686
Cow position: chr11:58805196-58804619 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 39

Conread position: 108-691
Cow position: chr11:12177708-12178302 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 49

Conread position: 116-355
Cow position: chr11:9432058-9432289 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 178
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 11, 0

Conread position: 116-420
Cow position: chr11:37117703-37117997 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 214
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 38, 54

Conread position: 116-507
Cow position: chr11:29616666-29616292 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 260, 41

Conread position: 116-672
Cow position: chr11:14260329-14259772 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 36

Conread position: 116-672
Cow position: chr11:26068489-26067921 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 41

Conread position: 116-691
Cow position: chr11:52846106-52846689 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 41

Conread position: 118-437
Cow position: chr11:42365930-42366245 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 209
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 156, 27

Conread position: 118-690
Cow position: chr11:44106307-44106892 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 39

Conread position: 119-691
Cow position: chr11:2285345-2285927 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 38

Conread position: 123-691
Cow position: chr11:24494172-24493594 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 34

Conread position: 125-678
Cow position: chr11:61426332-61426864 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 26

Conread position: 128-658
Cow position: chr11:28631174-28631708 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 29

Conread position: 135-691
Cow position: chr11:9387984-9388550 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 22

Conread position: 136-686
Cow position: chr11:15995133-15995696 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 21

Conread position: 137-691
Cow position: chr11:28598233-28597697 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 362
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 372, 66

Conread position: 152-391
Cow position: chr11:32254615-32254852 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 182
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 224, 51

Conread position: 154-691
Cow position: chr11:1667290-1667834 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 51

Conread position: 156-382
Cow position: chr11:72021090-72021316 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 159
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 18, 49

Conread position: 157-354
Cow position: chr11:45157044-45156849 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 153
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 46, 0

Conread position: 157-544
Cow position: chr11:40134141-40133764 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 47

Conread position: 157-690
Cow position: chr11:32876276-32875730 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 46

Conread position: 157-691
Cow position: chr11:7719848-7719301 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 56

Conread position: 157-691
Cow position: chr11:22618279-22617732 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 46

Conread position: 157-691
Cow position: chr11:37279909-37279367 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 56

Conread position: 157-691
Cow position: chr11:51033954-51034490 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 46

Conread position: 160-691
Cow position: chr11:49936072-49935534 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 46

Conread position: 162-311
Cow position: chr11:63617986-63617839 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 162-671
Cow position: chr11:40457848-40458364 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 52

Conread position: 164-390
Cow position: chr11:29547492-29547706 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 175
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 212, 39

Conread position: 164-690
Cow position: chr11:81067423-81067943 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 40

Conread position: 166-689
Cow position: chr11:3795915-3796426 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 334, 37

Conread position: 169-691
Cow position: chr11:17853773-17854308 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 44

Conread position: 170-385
Cow position: chr11:55486454-55486667 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 152
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 206, 27

Conread position: 170-674
Cow position: chr11:10365709-10365212 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 36

Conread position: 171-691
Cow position: chr11:13087986-13087453 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 42

Conread position: 178-691
Cow position: chr11:25335828-25336352 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 26

Conread position: 184-691
Cow position: chr11:26593084-26592563 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 30

Conread position: 194-396
Cow position: chr11:38842560-38842359 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 157
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 182, 18

Conread position: 196-671
Cow position: chr11:21471339-21471810 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 17

Conread position: 196-682
Cow position: chr11:30056918-30057395 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 53

Conread position: 203-686
Cow position: chr11:27284149-27284637 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 46

Conread position: 228-553
Cow position: chr11:41229262-41228935 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 231
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 148, 23

Conread position: 377-691
Cow position: chr11:34299025-34298713 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 220
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 85, 42

Show alignments to all cow chromosomes.