Cow genome map

Conread name: Ova1-OVRM10225D07

Conread position: 1-681
Cow position:
Alignm length: 696
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 156

Conread position: 4-220
Cow position:
Alignm length: 225
Alignm identity: 159
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 16, 156

Conread position: 4-225
Cow position:
Alignm length: 231
Alignm identity: 169
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 15, 88

Conread position: 4-257
Cow position:
Alignm length: 262
Alignm identity: 190
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 16, 156

Conread position: 4-276
Cow position:
Alignm length: 281
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-277
Cow position:
Alignm length: 285
Alignm identity: 208
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 16, 155

Conread position: 4-285
Cow position:
Alignm length: 290
Alignm identity: 211
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 16, 156

Conread position: 4-306
Cow position:
Alignm length: 312
Alignm identity: 165
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 18, 157

Conread position: 4-312
Cow position:
Alignm length: 317
Alignm identity: 220
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 16, 114

Conread position: 4-314
Cow position:
Alignm length: 319
Alignm identity: 232
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 18, 70

Conread position: 4-325
Cow position:
Alignm length: 330
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 156

Conread position: 4-326
Cow position:
Alignm length: 332
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 162

Conread position: 4-332
Cow position:
Alignm length: 337
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-347
Cow position:
Alignm length: 353
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 64

Conread position: 4-372
Cow position:
Alignm length: 377
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-374
Cow position:
Alignm length: 379
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-388
Cow position:
Alignm length: 395
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 150

Conread position: 4-395
Cow position:
Alignm length: 401
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 145

Conread position: 4-406
Cow position:
Alignm length: 415
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 159

Conread position: 4-460
Cow position:
Alignm length: 466
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-483
Cow position:
Alignm length: 489
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 67

Conread position: 4-497
Cow position:
Alignm length: 504
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 156

Conread position: 4-506
Cow position:
Alignm length: 513
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 152

Conread position: 4-507
Cow position:
Alignm length: 513
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 161

Conread position: 4-558
Cow position:
Alignm length: 570
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 171

Conread position: 4-558
Cow position:
Alignm length: 570
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 156

Conread position: 4-593
Cow position:
Alignm length: 605
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 78

Conread position: 4-631
Cow position:
Alignm length: 645
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 151

Conread position: 4-644
Cow position:
Alignm length: 659
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 156

Conread position: 4-647
Cow position:
Alignm length: 661
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 156

Conread position: 4-651
Cow position:
Alignm length: 686
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-655
Cow position:
Alignm length: 663
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 161

Conread position: 4-658
Cow position:
Alignm length: 672
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-665
Cow position:
Alignm length: 669
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 154

Conread position: 4-670
Cow position:
Alignm length: 694
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 159

Conread position: 4-671
Cow position:
Alignm length: 689
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 42

Conread position: 4-672
Cow position:
Alignm length: 695
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 77

Conread position: 4-672
Cow position:
Alignm length: 689
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 78

Conread position: 4-672
Cow position:
Alignm length: 685
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 49

Conread position: 4-684
Cow position:
Alignm length: 703
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 68

Conread position: 4-685
Cow position:
Alignm length: 705
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 156

Conread position: 4-686
Cow position:
Alignm length: 710
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 216

Conread position: 4-686
Cow position:
Alignm length: 706
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 145

Conread position: 4-687
Cow position:
Alignm length: 704
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 157

Conread position: 4-688
Cow position:
Alignm length: 707
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 77

Conread position: 4-690
Cow position:
Alignm length: 708
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 164

Conread position: 4-690
Cow position:
Alignm length: 717
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 213

Conread position: 4-690
Cow position:
Alignm length: 710
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 152

Conread position: 4-690
Cow position:
Alignm length: 704
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 150

Conread position: 4-690
Cow position:
Alignm length: 706
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 148

Conread position: 4-690
Cow position:
Alignm length: 707
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 156

Conread position: 4-690
Cow position:
Alignm length: 714
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 135

Conread position: 4-690
Cow position:
Alignm length: 709
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 161

Conread position: 4-690
Cow position:
Alignm length: 709
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 151

Conread position: 4-690
Cow position:
Alignm length: 710
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 152

Conread position: 4-691
Cow position:
Alignm length: 711
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 152

Conread position: 4-691
Cow position:
Alignm length: 704
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 105

Conread position: 4-691
Cow position:
Alignm length: 705
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 130

Conread position: 4-691
Cow position:
Alignm length: 707
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-691
Cow position:
Alignm length: 710
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 67

Conread position: 4-691
Cow position:
Alignm length: 701
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 26

Conread position: 4-691
Cow position:
Alignm length: 716
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 159

Conread position: 4-691
Cow position:
Alignm length: 706
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-691
Cow position:
Alignm length: 711
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-691
Cow position:
Alignm length: 711
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 46

Conread position: 4-691
Cow position:
Alignm length: 712
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-691
Cow position:
Alignm length: 707
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-691
Cow position:
Alignm length: 709
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 5-507
Cow position:
Alignm length: 516
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 158

Conread position: 5-620
Cow position:
Alignm length: 632
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 76

Conread position: 5-636
Cow position:
Alignm length: 654
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 45

Conread position: 5-684
Cow position:
Alignm length: 690
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 74

Conread position: 5-686
Cow position:
Alignm length: 704
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 141

Conread position: 5-686
Cow position:
Alignm length: 702
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 6

Conread position: 5-690
Cow position:
Alignm length: 709
Alignm identity: 544
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 50

Conread position: 5-691
Cow position:
Alignm length: 711
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 77

Conread position: 5-691
Cow position:
Alignm length: 708
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 46

Conread position: 5-691
Cow position:
Alignm length: 711
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 151

Conread position: 5-691
Cow position:
Alignm length: 710
Alignm identity: 543
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 155

Conread position: 5-691
Cow position:
Alignm length: 708
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 154

Conread position: 5-691
Cow position:
Alignm length: 711
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 155

Conread position: 6-248
Cow position:
Alignm length: 251
Alignm identity: 183
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 14, 154

Conread position: 6-691
Cow position:
Alignm length: 709
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 6

Conread position: 7-413
Cow position:
Alignm length: 423
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 29

Conread position: 7-528
Cow position:
Alignm length: 535
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 155

Conread position: 7-656
Cow position:
Alignm length: 664
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 152

Conread position: 7-658
Cow position:
Alignm length: 667
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 5

Conread position: 7-687
Cow position:
Alignm length: 704
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 75

Conread position: 15-672
Cow position:
Alignm length: 666
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 12

Conread position: 17-430
Cow position:
Alignm length: 418
Alignm identity: 278
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 29, 55

Conread position: 23-214
Cow position:
Alignm length: 196
Alignm identity: 137
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 77, 129

Conread position: 23-368
Cow position:
Alignm length: 346
Alignm identity: 233
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 60, 0

Conread position: 23-434
Cow position:
Alignm length: 420
Alignm identity: 276
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 74, 138

Conread position: 23-672
Cow position:
Alignm length: 657
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 133

Conread position: 25-449
Cow position:
Alignm length: 428
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 128

Conread position: 30-465
Cow position:
Alignm length: 442
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 122

Conread position: 30-549
Cow position:
Alignm length: 527
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 28

Conread position: 33-621
Cow position:
Alignm length: 599
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 125

Conread position: 33-688
Cow position:
Alignm length: 673
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 119

Conread position: 35-454
Cow position:
Alignm length: 425
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 126

Conread position: 42-328
Cow position:
Alignm length: 290
Alignm identity: 185
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 53, 159

Conread position: 42-354
Cow position:
Alignm length: 317
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 91

Conread position: 44-586
Cow position:
Alignm length: 549
Alignm identity: 343
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 60, 22

Conread position: 57-691
Cow position:
Alignm length: 654
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 99

Conread position: 58-597
Cow position:
Alignm length: 566
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 30

Conread position: 58-691
Cow position:
Alignm length: 672
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 30

Conread position: 69-466
Cow position:
Alignm length: 402
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 86

Conread position: 69-686
Cow position:
Alignm length: 631
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 90

Conread position: 78-690
Cow position:
Alignm length: 633
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 64

Conread position: 87-690
Cow position:
Alignm length: 627
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 74

Conread position: 87-691
Cow position:
Alignm length: 625
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 74

Conread position: 90-688
Cow position:
Alignm length: 617
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 27

Conread position: 101-671
Cow position:
Alignm length: 587
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 32

Conread position: 102-376
Cow position:
Alignm length: 275
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 102-434
Cow position:
Alignm length: 335
Alignm identity: 224
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 274, 53

Conread position: 102-686
Cow position:
Alignm length: 600
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 81

Conread position: 102-691
Cow position:
Alignm length: 603
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 50

Conread position: 102-691
Cow position:
Alignm length: 605
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 55

Conread position: 102-691
Cow position:
Alignm length: 605
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 50

Conread position: 103-466
Cow position:
Alignm length: 365
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 54

Conread position: 103-669
Cow position:
Alignm length: 574
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 54

Conread position: 109-507
Cow position:
Alignm length: 403
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 48

Conread position: 117-691
Cow position:
Alignm length: 591
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 102

Conread position: 118-412
Cow position:
Alignm length: 298
Alignm identity: 207
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 188, 39

Conread position: 129-682
Cow position:
Alignm length: 564
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 28

Conread position: 140-658
Cow position:
Alignm length: 528
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 73

Conread position: 148-381
Cow position:
Alignm length: 237
Alignm identity: 179
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 5, 18

Conread position: 156-691
Cow position:
Alignm length: 547
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 48

Conread position: 159-554
Cow position:
Alignm length: 397
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 44

Conread position: 164-374
Cow position:
Alignm length: 211
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 164-419
Cow position:
Alignm length: 259
Alignm identity: 176
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 61, 40

Conread position: 164-483
Cow position:
Alignm length: 321
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 39

Conread position: 164-691
Cow position:
Alignm length: 544
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 49

Conread position: 171-691
Cow position:
Alignm length: 536
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 32

Conread position: 178-691
Cow position:
Alignm length: 523
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 26

Conread position: 179-332
Cow position:
Alignm length: 154
Alignm identity: 118
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 25, 0

Conread position: 179-470
Cow position:
Alignm length: 293
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 34

Conread position: 188-691
Cow position:
Alignm length: 519
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 61

Conread position: 196-672
Cow position:
Alignm length: 485
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 8

Conread position: 198-672
Cow position:
Alignm length: 485
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 6

Conread position: 208-689
Cow position:
Alignm length: 496
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 41

Show alignments to all cow chromosomes.