Cow genome map

Conread name: Ova1-OVRM10225D07

Conread position: 1-672
Cow position: chr20:31220169-31220812 (view UCSC Genome Browser custom track)
Alignm length: 684
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 162

Conread position: 3-507
Cow position: chr20:5538043-5538541 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 156

Conread position: 4-208
Cow position: chr20:18356093-18356303 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 160
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 16, 156

Conread position: 4-231
Cow position: chr20:5270307-5270079 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 171
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 16, 78

Conread position: 4-262
Cow position: chr20:10866934-10866674 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 193
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 18, 85

Conread position: 4-271
Cow position: chr20:2653991-2654260 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 193
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 18, 36

Conread position: 4-276
Cow position: chr20:3509749-3510023 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 196
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 20, 159

Conread position: 4-280
Cow position: chr20:29313668-29313948 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 196
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 16, 63

Conread position: 4-309
Cow position: chr20:5225700-5225397 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 214
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 18, 160

Conread position: 4-315
Cow position: chr20:12693903-12694216 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 221
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 18, 63

Conread position: 4-346
Cow position: chr20:23801765-23802097 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 247
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 18, 162

Conread position: 4-351
Cow position: chr20:28163906-28164254 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 155

Conread position: 4-357
Cow position: chr20:20939171-20938826 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 18

Conread position: 4-362
Cow position: chr20:13788972-13789331 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 244
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 20, 76

Conread position: 4-374
Cow position: chr20:34459450-34459077 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 161

Conread position: 4-395
Cow position: chr20:42085395-42085790 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-396
Cow position: chr20:27345120-27344726 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 72

Conread position: 4-396
Cow position: chr20:35108325-35107929 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-409
Cow position: chr20:35144041-35143631 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 156

Conread position: 4-437
Cow position: chr20:5076849-5077285 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 80

Conread position: 4-458
Cow position: chr20:19306523-19306065 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-458
Cow position: chr20:21016145-21015696 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 20

Conread position: 4-458
Cow position: chr20:33598102-33597644 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-484
Cow position: chr20:35127533-35128015 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 156

Conread position: 4-491
Cow position: chr20:13575855-13575366 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 213

Conread position: 4-507
Cow position: chr20:25845761-25845256 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 161

Conread position: 4-511
Cow position: chr20:23805015-23804505 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 42

Conread position: 4-521
Cow position: chr20:16944379-16944880 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-530
Cow position: chr20:28034992-28034474 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 52

Conread position: 4-539
Cow position: chr20:39234093-39234638 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-544
Cow position: chr20:38957000-38957550 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-607
Cow position: chr20:3808907-3808297 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 152

Conread position: 4-609
Cow position: chr20:34967845-34968461 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 156

Conread position: 4-629
Cow position: chr20:34642872-34643508 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 159

Conread position: 4-652
Cow position: chr20:16106308-16106970 (view UCSC Genome Browser custom track)
Alignm length: 668
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 160

Conread position: 4-658
Cow position: chr20:12047372-12048007 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 39

Conread position: 4-664
Cow position: chr20:16189879-16189216 (view UCSC Genome Browser custom track)
Alignm length: 669
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-668
Cow position: chr20:7569102-7568435 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 159

Conread position: 4-668
Cow position: chr20:7593590-7592921 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 160

Conread position: 4-668
Cow position: chr20:13954495-13955162 (view UCSC Genome Browser custom track)
Alignm length: 685
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 150

Conread position: 4-669
Cow position: chr20:10494065-10494729 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 65

Conread position: 4-670
Cow position: chr20:27994676-27993985 (view UCSC Genome Browser custom track)
Alignm length: 699
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 155

Conread position: 4-672
Cow position: chr20:21719420-21720094 (view UCSC Genome Browser custom track)
Alignm length: 683
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-672
Cow position: chr20:33296083-33295409 (view UCSC Genome Browser custom track)
Alignm length: 686
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 50

Conread position: 4-672
Cow position: chr20:36418854-36418181 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 87

Conread position: 4-675
Cow position: chr20:5086475-5085793 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-686
Cow position: chr20:6476380-6477046 (view UCSC Genome Browser custom track)
Alignm length: 698
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 54

Conread position: 4-688
Cow position: chr20:15294900-15295581 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 52

Conread position: 4-689
Cow position: chr20:14757395-14756691 (view UCSC Genome Browser custom track)
Alignm length: 725
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 153

Conread position: 4-690
Cow position: chr20:7597995-7597296 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 156

Conread position: 4-690
Cow position: chr20:12435533-12434834 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 152

Conread position: 4-690
Cow position: chr20:12568448-12567754 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 104

Conread position: 4-690
Cow position: chr20:13765755-13766448 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 152

Conread position: 4-690
Cow position: chr20:22208484-22209187 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 161

Conread position: 4-690
Cow position: chr20:23466787-23466084 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 155

Conread position: 4-690
Cow position: chr20:27876344-27877049 (view UCSC Genome Browser custom track)
Alignm length: 716
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 73

Conread position: 4-690
Cow position: chr20:28561022-28560328 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 156

Conread position: 4-690
Cow position: chr20:28724619-28725325 (view UCSC Genome Browser custom track)
Alignm length: 715
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 65

Conread position: 4-690
Cow position: chr20:30688737-30689438 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 152

Conread position: 4-690
Cow position: chr20:35159718-35159025 (view UCSC Genome Browser custom track)
Alignm length: 703
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 157

Conread position: 4-691
Cow position: chr20:753300-754008 (view UCSC Genome Browser custom track)
Alignm length: 714
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 152

Conread position: 4-691
Cow position: chr20:6136127-6135424 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-691
Cow position: chr20:7513065-7512374 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 74

Conread position: 4-691
Cow position: chr20:8971029-8970338 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 151

Conread position: 4-691
Cow position: chr20:13506696-13506012 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-691
Cow position: chr20:14925780-14925075 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-691
Cow position: chr20:16515219-16515890 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 104

Conread position: 4-691
Cow position: chr20:16559679-16558965 (view UCSC Genome Browser custom track)
Alignm length: 720
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-691
Cow position: chr20:22061315-22060611 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 152

Conread position: 4-691
Cow position: chr20:28294175-28294883 (view UCSC Genome Browser custom track)
Alignm length: 716
Alignm identity: 546
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 155

Conread position: 4-691
Cow position: chr20:28444486-28443782 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 152

Conread position: 4-691
Cow position: chr20:30431133-30431846 (view UCSC Genome Browser custom track)
Alignm length: 720
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 162

Conread position: 5-242
Cow position: chr20:2681711-2681949 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 168
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 17, 77

Conread position: 5-272
Cow position: chr20:22186270-22186001 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 191
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 17, 154

Conread position: 5-298
Cow position: chr20:9587634-9587924 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 25

Conread position: 5-335
Cow position: chr20:15093710-15093376 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 160

Conread position: 5-351
Cow position: chr20:37270949-37271299 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 155

Conread position: 5-442
Cow position: chr20:35131873-35132312 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 125

Conread position: 5-447
Cow position: chr20:24542289-24542735 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 157

Conread position: 5-498
Cow position: chr20:31785510-31785021 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 155

Conread position: 5-555
Cow position: chr20:7810971-7810419 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 45

Conread position: 5-658
Cow position: chr20:18093036-18092374 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 60

Conread position: 5-690
Cow position: chr20:15090512-15089807 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 160

Conread position: 5-691
Cow position: chr20:825643-826348 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 160

Conread position: 5-691
Cow position: chr20:9338885-9339581 (view UCSC Genome Browser custom track)
Alignm length: 714
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 208

Conread position: 5-691
Cow position: chr20:15116678-15117374 (view UCSC Genome Browser custom track)
Alignm length: 716
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 63

Conread position: 5-691
Cow position: chr20:19440778-19441486 (view UCSC Genome Browser custom track)
Alignm length: 723
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 133

Conread position: 5-691
Cow position: chr20:24568406-24567705 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 151

Conread position: 6-604
Cow position: chr20:35019782-35020384 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 86

Conread position: 6-648
Cow position: chr20:14867519-14866870 (view UCSC Genome Browser custom track)
Alignm length: 665
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 61

Conread position: 7-690
Cow position: chr20:17658367-17657666 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 149

Conread position: 9-685
Cow position: chr20:6259433-6258745 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 151

Conread position: 9-691
Cow position: chr20:30385379-30384678 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 152

Conread position: 10-361
Cow position: chr20:23393144-23392790 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 150

Conread position: 10-434
Cow position: chr20:870145-869718 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 286
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 10, 50

Conread position: 10-513
Cow position: chr20:14721505-14721003 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 139

Conread position: 11-526
Cow position: chr20:14741060-14741580 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 29

Conread position: 16-255
Cow position: chr20:31076563-31076323 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 171
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 11, 157

Conread position: 17-328
Cow position: chr20:19669575-19669274 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 209
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 8, 90

Conread position: 17-420
Cow position: chr20:37955965-37955573 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 257
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 359, 11

Conread position: 19-670
Cow position: chr20:13654444-13653802 (view UCSC Genome Browser custom track)
Alignm length: 658
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 98

Conread position: 23-273
Cow position: chr20:10495870-10496118 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 172
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 79, 62

Conread position: 23-337
Cow position: chr20:1743887-1744190 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 214
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 77, 105

Conread position: 23-435
Cow position: chr20:3677469-3677082 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 275
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 105, 24

Conread position: 23-447
Cow position: chr20:20352457-20352044 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 295
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 20, 46

Conread position: 23-525
Cow position: chr20:6500809-6500284 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 134

Conread position: 23-688
Cow position: chr20:31846947-31846272 (view UCSC Genome Browser custom track)
Alignm length: 684
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 127

Conread position: 23-691
Cow position: chr20:18489832-18490516 (view UCSC Genome Browser custom track)
Alignm length: 697
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 137

Conread position: 24-435
Cow position: chr20:37169340-37168931 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 132

Conread position: 24-691
Cow position: chr20:19844665-19845331 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 135

Conread position: 25-691
Cow position: chr20:24399978-24399299 (view UCSC Genome Browser custom track)
Alignm length: 685
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 131

Conread position: 28-325
Cow position: chr20:6018642-6018342 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 212
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 37, 29

Conread position: 28-369
Cow position: chr20:11719668-11720007 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 133

Conread position: 30-690
Cow position: chr20:5794666-5795333 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 125

Conread position: 31-443
Cow position: chr20:19425088-19425497 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 14

Conread position: 42-349
Cow position: chr20:40007751-40007445 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 119

Conread position: 48-248
Cow position: chr20:17667167-17667365 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 144
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 54, 14

Conread position: 52-337
Cow position: chr20:10063060-10062781 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 198
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 48, 26

Conread position: 52-468
Cow position: chr20:26800370-26799954 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 113

Conread position: 52-604
Cow position: chr20:30578777-30579336 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 109

Conread position: 52-687
Cow position: chr20:20731168-20731822 (view UCSC Genome Browser custom track)
Alignm length: 661
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 109

Conread position: 55-691
Cow position: chr20:6240214-6239580 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 30

Conread position: 56-691
Cow position: chr20:25659103-25658464 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 96

Conread position: 58-689
Cow position: chr20:13677798-13677182 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 39

Conread position: 59-689
Cow position: chr20:21397742-21398382 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 61

Conread position: 60-691
Cow position: chr20:20440048-20439402 (view UCSC Genome Browser custom track)
Alignm length: 652
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 96

Conread position: 69-449
Cow position: chr20:15800029-15799649 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 92

Conread position: 69-691
Cow position: chr20:10404633-10405261 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 92

Conread position: 82-640
Cow position: chr20:28482784-28483333 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 362
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 25, 68

Conread position: 101-598
Cow position: chr20:1534563-1534073 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 321
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 210, 49

Conread position: 102-646
Cow position: chr20:34231888-34231354 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 55

Conread position: 102-672
Cow position: chr20:9996500-9997078 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 52

Conread position: 102-691
Cow position: chr20:8445381-8445979 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 55

Conread position: 102-691
Cow position: chr20:30146403-30146998 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 55

Conread position: 102-691
Cow position: chr20:31504298-31504900 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 52

Conread position: 104-691
Cow position: chr20:9410334-9410912 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 47

Conread position: 104-691
Cow position: chr20:35093510-35094090 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 53

Conread position: 106-587
Cow position: chr20:20092271-20092756 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 51

Conread position: 116-670
Cow position: chr20:38654873-38654320 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 354
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 239, 34

Conread position: 118-507
Cow position: chr20:28247266-28246882 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 39

Conread position: 119-691
Cow position: chr20:22048351-22048933 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 38

Conread position: 123-672
Cow position: chr20:15067806-15068360 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 34

Conread position: 127-691
Cow position: chr20:5503754-5503180 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 30

Conread position: 127-691
Cow position: chr20:13325103-13325657 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 30

Conread position: 128-663
Cow position: chr20:10685728-10686262 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 77

Conread position: 129-686
Cow position: chr20:19364877-19364327 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 382, 28

Conread position: 132-570
Cow position: chr20:10790454-10790893 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 25

Conread position: 133-598
Cow position: chr20:28887375-28887841 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 29

Conread position: 148-669
Cow position: chr20:32351612-32352134 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 55

Conread position: 152-449
Cow position: chr20:11656999-11657284 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 194
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 209, 16

Conread position: 152-689
Cow position: chr20:8364758-8364230 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 351
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 52, 95

Conread position: 157-511
Cow position: chr20:12997247-12996889 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 46

Conread position: 157-687
Cow position: chr20:774678-775221 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 46

Conread position: 161-686
Cow position: chr20:35844406-35843879 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 41

Conread position: 162-430
Cow position: chr20:14872710-14872442 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 182
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 104, 41

Conread position: 162-644
Cow position: chr20:19018379-19017898 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 42

Conread position: 162-686
Cow position: chr20:28956926-28956393 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 51

Conread position: 162-691
Cow position: chr20:15526770-15527312 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 42

Conread position: 163-613
Cow position: chr20:14672364-14672818 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 40

Conread position: 169-691
Cow position: chr20:32165067-32164539 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 34

Conread position: 172-571
Cow position: chr20:13025293-13024892 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 275
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 168, 32

Conread position: 173-686
Cow position: chr20:13050536-13050003 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 31

Conread position: 174-690
Cow position: chr20:6550961-6550432 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 30

Conread position: 190-672
Cow position: chr20:29371365-29370879 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 14

Conread position: 196-667
Cow position: chr20:8890377-8890844 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 8

Conread position: 208-446
Cow position: chr20:31157670-31157908 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 41

Conread position: 208-526
Cow position: chr20:32639079-32639405 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 41

Conread position: 208-691
Cow position: chr20:38000560-38001044 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 41

Conread position: 213-337
Cow position: chr20:3468433-3468556 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 220-687
Cow position: chr20:9535987-9536451 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 26

Conread position: 402-691
Cow position: chr20:18322293-18322003 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 211
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 107, 165

Show alignments to all cow chromosomes.