Cow genome map

Conread name: Ova1-OVRM10225D07

Conread position: 1-691
Cow position: chr22:15954200-15953505 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 130

Conread position: 3-604
Cow position: chr22:21756200-21756785 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 102

Conread position: 3-691
Cow position: chr22:41946909-41946215 (view UCSC Genome Browser custom track)
Alignm length: 713
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 157

Conread position: 4-202
Cow position: chr22:11609443-11609647 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 157
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 18, 157

Conread position: 4-209
Cow position: chr22:8595209-8594996 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 164
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 19, 159

Conread position: 4-209
Cow position: chr22:22934574-22934784 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 163
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 16, 156

Conread position: 4-231
Cow position: chr22:15867946-15868180 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 166
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 20, 207

Conread position: 4-248
Cow position: chr22:11785267-11785019 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 187
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 18, 156

Conread position: 4-289
Cow position: chr22:27513284-27513569 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 205
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 18, 42

Conread position: 4-293
Cow position: chr22:20238033-20237741 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 215
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 16, 151

Conread position: 4-297
Cow position: chr22:21364729-21364442 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 193
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 100, 51

Conread position: 4-305
Cow position: chr22:44100540-44100236 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 152

Conread position: 4-325
Cow position: chr22:28556493-28556817 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 150

Conread position: 4-349
Cow position: chr22:36186433-36186767 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 55

Conread position: 4-354
Cow position: chr22:34822345-34821996 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 50

Conread position: 4-355
Cow position: chr22:8487074-8486720 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-363
Cow position: chr22:3296955-3296594 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 150

Conread position: 4-363
Cow position: chr22:41472725-41472363 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 240
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 83, 38

Conread position: 4-384
Cow position: chr22:44381659-44381275 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-395
Cow position: chr22:5931283-5930879 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 252
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 18, 152

Conread position: 4-396
Cow position: chr22:14629584-14629188 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-396
Cow position: chr22:23867772-23868168 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 156

Conread position: 4-396
Cow position: chr22:28713660-28714057 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 157

Conread position: 4-396
Cow position: chr22:32338122-32338517 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-407
Cow position: chr22:3806420-3806830 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 196

Conread position: 4-417
Cow position: chr22:10549531-10549947 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 162

Conread position: 4-446
Cow position: chr22:35668868-35668419 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 120

Conread position: 4-449
Cow position: chr22:35162852-35162410 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 92

Conread position: 4-461
Cow position: chr22:46524468-46524931 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 162

Conread position: 4-465
Cow position: chr22:2040122-2040594 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 58

Conread position: 4-477
Cow position: chr22:29185326-29184844 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 166

Conread position: 4-498
Cow position: chr22:24143662-24143158 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 157

Conread position: 4-502
Cow position: chr22:25725205-25724703 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-536
Cow position: chr22:1483216-1483753 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 155

Conread position: 4-538
Cow position: chr22:324361-323830 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 52

Conread position: 4-553
Cow position: chr22:37269898-37270449 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 78

Conread position: 4-558
Cow position: chr22:557903-557340 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 158

Conread position: 4-558
Cow position: chr22:3714704-3714140 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-558
Cow position: chr22:21956974-21957512 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 24

Conread position: 4-559
Cow position: chr22:42500564-42500002 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 162

Conread position: 4-607
Cow position: chr22:13184617-13185217 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 35

Conread position: 4-609
Cow position: chr22:36858737-36858131 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 161

Conread position: 4-622
Cow position: chr22:36584824-36584206 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 73

Conread position: 4-639
Cow position: chr22:15878208-15877564 (view UCSC Genome Browser custom track)
Alignm length: 655
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 123

Conread position: 4-643
Cow position: chr22:6498891-6498279 (view UCSC Genome Browser custom track)
Alignm length: 653
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 67

Conread position: 4-644
Cow position: chr22:5014884-5015540 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 163

Conread position: 4-651
Cow position: chr22:10601672-10602308 (view UCSC Genome Browser custom track)
Alignm length: 665
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 85

Conread position: 4-651
Cow position: chr22:11036301-11036932 (view UCSC Genome Browser custom track)
Alignm length: 658
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 162

Conread position: 4-655
Cow position: chr22:30067700-30067055 (view UCSC Genome Browser custom track)
Alignm length: 666
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 149

Conread position: 4-671
Cow position: chr22:13248632-13249299 (view UCSC Genome Browser custom track)
Alignm length: 684
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 11

Conread position: 4-671
Cow position: chr22:40589189-40589883 (view UCSC Genome Browser custom track)
Alignm length: 700
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 166

Conread position: 4-672
Cow position: chr22:18604006-18603332 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 78

Conread position: 4-675
Cow position: chr22:34932278-34931599 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 159

Conread position: 4-678
Cow position: chr22:48272199-48271547 (view UCSC Genome Browser custom track)
Alignm length: 684
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 61

Conread position: 4-686
Cow position: chr22:8339215-8339902 (view UCSC Genome Browser custom track)
Alignm length: 701
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 162

Conread position: 4-686
Cow position: chr22:25968848-25968173 (view UCSC Genome Browser custom track)
Alignm length: 696
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 78

Conread position: 4-688
Cow position: chr22:11767997-11767339 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 163

Conread position: 4-688
Cow position: chr22:29396903-29397581 (view UCSC Genome Browser custom track)
Alignm length: 700
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 100

Conread position: 4-688
Cow position: chr22:29956401-29955703 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 161

Conread position: 4-690
Cow position: chr22:1311120-1310440 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 51

Conread position: 4-690
Cow position: chr22:3434164-3433460 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 150

Conread position: 4-690
Cow position: chr22:6339458-6340155 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 78

Conread position: 4-690
Cow position: chr22:9269000-9269702 (view UCSC Genome Browser custom track)
Alignm length: 714
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 156

Conread position: 4-690
Cow position: chr22:15309164-15308459 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 161

Conread position: 4-690
Cow position: chr22:17325682-17324999 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 67

Conread position: 4-690
Cow position: chr22:19601002-19600298 (view UCSC Genome Browser custom track)
Alignm length: 715
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 156

Conread position: 4-690
Cow position: chr22:19821985-19822694 (view UCSC Genome Browser custom track)
Alignm length: 717
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 155

Conread position: 4-690
Cow position: chr22:21193403-21192711 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 155

Conread position: 4-690
Cow position: chr22:21592222-21592926 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 161

Conread position: 4-690
Cow position: chr22:28784920-28785614 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 67

Conread position: 4-690
Cow position: chr22:31315343-31316046 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 156

Conread position: 4-690
Cow position: chr22:31332072-31331369 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 155

Conread position: 4-690
Cow position: chr22:33952151-33951456 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 151

Conread position: 4-690
Cow position: chr22:37291042-37290351 (view UCSC Genome Browser custom track)
Alignm length: 703
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 155

Conread position: 4-690
Cow position: chr22:39465742-39465038 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 156

Conread position: 4-690
Cow position: chr22:42993973-42994673 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 86

Conread position: 4-691
Cow position: chr22:51315-52014 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 156

Conread position: 4-691
Cow position: chr22:532893-533595 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 543
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 156

Conread position: 4-691
Cow position: chr22:539934-540639 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-691
Cow position: chr22:1026806-1027511 (view UCSC Genome Browser custom track)
Alignm length: 719
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 154

Conread position: 4-691
Cow position: chr22:5315040-5315745 (view UCSC Genome Browser custom track)
Alignm length: 713
Alignm identity: 541
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 153

Conread position: 4-691
Cow position: chr22:6722768-6722071 (view UCSC Genome Browser custom track)
Alignm length: 714
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 79

Conread position: 4-691
Cow position: chr22:7155458-7156144 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 78

Conread position: 4-691
Cow position: chr22:9729173-9728492 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 42

Conread position: 4-691
Cow position: chr22:10577689-10576984 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-691
Cow position: chr22:12728859-12728163 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 543
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 65

Conread position: 4-691
Cow position: chr22:13721940-13721237 (view UCSC Genome Browser custom track)
Alignm length: 717
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 164

Conread position: 4-691
Cow position: chr22:14822855-14822159 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 130

Conread position: 4-691
Cow position: chr22:15013895-15013189 (view UCSC Genome Browser custom track)
Alignm length: 716
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 157

Conread position: 4-691
Cow position: chr22:20570242-20569538 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-691
Cow position: chr22:22606956-22607662 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 157

Conread position: 4-691
Cow position: chr22:24817964-24817261 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 68

Conread position: 4-691
Cow position: chr22:32019760-32019059 (view UCSC Genome Browser custom track)
Alignm length: 714
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 72

Conread position: 4-691
Cow position: chr22:39473821-39473103 (view UCSC Genome Browser custom track)
Alignm length: 727
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 165

Conread position: 4-691
Cow position: chr22:39902180-39902885 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-691
Cow position: chr22:40829270-40828563 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-691
Cow position: chr22:44366411-44365706 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 159

Conread position: 4-691
Cow position: chr22:45280748-45281447 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-691
Cow position: chr22:47958440-47957764 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 12

Conread position: 5-151
Cow position: chr22:34171143-34171296 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 16, 75

Conread position: 5-193
Cow position: chr22:5624966-5624773 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 15, 155

Conread position: 5-412
Cow position: chr22:981091-981502 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 149

Conread position: 5-491
Cow position: chr22:34614843-34615329 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 41

Conread position: 5-507
Cow position: chr22:44494063-44494547 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 156

Conread position: 5-574
Cow position: chr22:43235637-43236217 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 155

Conread position: 5-653
Cow position: chr22:26105337-26104679 (view UCSC Genome Browser custom track)
Alignm length: 667
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 78

Conread position: 5-682
Cow position: chr22:26338116-26338794 (view UCSC Genome Browser custom track)
Alignm length: 700
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 126

Conread position: 5-687
Cow position: chr22:40373202-40373885 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 159

Conread position: 5-689
Cow position: chr22:696730-697434 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 161

Conread position: 5-689
Cow position: chr22:30675927-30675235 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 155

Conread position: 5-690
Cow position: chr22:18808429-18807731 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 155

Conread position: 5-690
Cow position: chr22:18812110-18811411 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 155

Conread position: 5-691
Cow position: chr22:3275557-3274853 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 541
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 151

Conread position: 5-691
Cow position: chr22:10907402-10906706 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 152

Conread position: 5-691
Cow position: chr22:22106848-22107546 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 64

Conread position: 5-691
Cow position: chr22:27307164-27306460 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 154

Conread position: 5-691
Cow position: chr22:29854656-29855354 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 85

Conread position: 5-691
Cow position: chr22:46033030-46033723 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 154

Conread position: 6-335
Cow position: chr22:34596666-34596998 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 226
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 14, 157

Conread position: 6-461
Cow position: chr22:22230407-22230865 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 87

Conread position: 6-659
Cow position: chr22:32220272-32220919 (view UCSC Genome Browser custom track)
Alignm length: 663
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 70

Conread position: 6-679
Cow position: chr22:31416241-31416928 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 442
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 22, 9

Conread position: 6-686
Cow position: chr22:34605015-34605666 (view UCSC Genome Browser custom track)
Alignm length: 696
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 74

Conread position: 6-690
Cow position: chr22:19140899-19140203 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 48

Conread position: 7-324
Cow position: chr22:283174-282869 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 207
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 20, 100

Conread position: 7-372
Cow position: chr22:8118432-8118093 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 254
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 20, 60

Conread position: 7-530
Cow position: chr22:3303851-3303338 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 152

Conread position: 7-670
Cow position: chr22:4291500-4292118 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 110

Conread position: 7-684
Cow position: chr22:26243196-26243856 (view UCSC Genome Browser custom track)
Alignm length: 691
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 71

Conread position: 8-314
Cow position: chr22:44516412-44516109 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 215
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 13, 47

Conread position: 8-356
Cow position: chr22:44480322-44480675 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 252
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 14, 162

Conread position: 8-690
Cow position: chr22:13209192-13209878 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 74

Conread position: 11-690
Cow position: chr22:1518224-1517538 (view UCSC Genome Browser custom track)
Alignm length: 697
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 68

Conread position: 13-262
Cow position: chr22:22030034-22030286 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 169
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 88, 135

Conread position: 15-507
Cow position: chr22:3254807-3254300 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 138

Conread position: 16-281
Cow position: chr22:1709798-1710065 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 198
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 7, 38

Conread position: 16-368
Cow position: chr22:34749379-34749720 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 249
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 14, 111

Conread position: 17-436
Cow position: chr22:46586812-46587231 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 139

Conread position: 17-691
Cow position: chr22:41034541-41035201 (view UCSC Genome Browser custom track)
Alignm length: 691
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 21

Conread position: 21-355
Cow position: chr22:38552876-38553195 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 240
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 82, 46

Conread position: 21-642
Cow position: chr22:12969573-12968957 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 135

Conread position: 22-332
Cow position: chr22:34883522-34883837 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 207
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 52, 201

Conread position: 23-223
Cow position: chr22:17782248-17782048 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 143
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 77, 152

Conread position: 23-314
Cow position: chr22:2390709-2390425 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 204
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 86, 50

Conread position: 23-683
Cow position: chr22:12869632-12868966 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 133

Conread position: 24-231
Cow position: chr22:8299054-8299262 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 157
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 27, 133

Conread position: 24-396
Cow position: chr22:45893590-45893962 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 132

Conread position: 24-456
Cow position: chr22:45353646-45354073 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 133

Conread position: 24-672
Cow position: chr22:13775329-13775968 (view UCSC Genome Browser custom track)
Alignm length: 663
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 59

Conread position: 24-691
Cow position: chr22:18030079-18030727 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 129

Conread position: 25-584
Cow position: chr22:46569265-46568699 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 131

Conread position: 29-670
Cow position: chr22:41408628-41407991 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 127

Conread position: 30-686
Cow position: chr22:37536470-37535832 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 126

Conread position: 30-690
Cow position: chr22:41846742-41846066 (view UCSC Genome Browser custom track)
Alignm length: 686
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 43

Conread position: 34-342
Cow position: chr22:16144259-16144566 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 127

Conread position: 37-690
Cow position: chr22:11754794-11754150 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 124

Conread position: 42-566
Cow position: chr22:18194551-18195067 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 20

Conread position: 44-678
Cow position: chr22:4227393-4226755 (view UCSC Genome Browser custom track)
Alignm length: 658
Alignm identity: 420
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 57, 34

Conread position: 45-691
Cow position: chr22:25340000-25340651 (view UCSC Genome Browser custom track)
Alignm length: 660
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 106

Conread position: 50-396
Cow position: chr22:45014178-45013831 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 107

Conread position: 52-354
Cow position: chr22:18185835-18186133 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 106

Conread position: 52-362
Cow position: chr22:36565293-36564985 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 229
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 50, 75

Conread position: 52-374
Cow position: chr22:36541423-36541105 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 24

Conread position: 54-663
Cow position: chr22:9371214-9371827 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 31

Conread position: 58-380
Cow position: chr22:518519-518199 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 104

Conread position: 58-672
Cow position: chr22:35904341-35903751 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 48

Conread position: 58-690
Cow position: chr22:15857652-15858282 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 101

Conread position: 69-685
Cow position: chr22:46578843-46578209 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 86

Conread position: 69-691
Cow position: chr22:3489465-3488832 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 7

Conread position: 71-564
Cow position: chr22:1280769-1280291 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 81

Conread position: 85-487
Cow position: chr22:22862479-22862875 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 62

Conread position: 94-483
Cow position: chr22:28997690-28997305 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 58

Conread position: 102-465
Cow position: chr22:26944304-26943945 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 50

Conread position: 102-599
Cow position: chr22:6202559-6202067 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 59

Conread position: 103-672
Cow position: chr22:11988800-11988226 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 43

Conread position: 105-683
Cow position: chr22:8734627-8734046 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 40

Conread position: 106-690
Cow position: chr22:30917999-30918571 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 51

Conread position: 109-368
Cow position: chr22:30513921-30514173 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 187
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 48, 0

Conread position: 116-342
Cow position: chr22:4290889-4290668 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 164
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 116-690
Cow position: chr22:13697003-13696423 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 41

Conread position: 117-492
Cow position: chr22:27320580-27320942 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 41

Conread position: 124-503
Cow position: chr22:5452579-5452954 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 33

Conread position: 125-506
Cow position: chr22:5334598-5334238 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 32

Conread position: 126-691
Cow position: chr22:34607417-34607982 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 20

Conread position: 127-628
Cow position: chr22:34759136-34758626 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 77

Conread position: 128-691
Cow position: chr22:26090305-26089732 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 29

Conread position: 129-688
Cow position: chr22:15920897-15920340 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 28

Conread position: 157-687
Cow position: chr22:19048817-19048281 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 47

Conread position: 157-691
Cow position: chr22:35910531-35909981 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 46

Conread position: 157-691
Cow position: chr22:44925370-44924829 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 47

Conread position: 164-359
Cow position: chr22:30089328-30089513 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 164-691
Cow position: chr22:25336115-25336655 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 49

Conread position: 165-374
Cow position: chr22:46658995-46659196 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 158
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 167-691
Cow position: chr22:3011707-3012217 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 37

Conread position: 174-361
Cow position: chr22:5624512-5624331 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 30, 0

Conread position: 174-672
Cow position: chr22:34171424-34171929 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 30

Conread position: 183-691
Cow position: chr22:32943431-32943952 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 30

Conread position: 189-430
Cow position: chr22:18191496-18191738 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 15

Conread position: 196-691
Cow position: chr22:37323273-37323767 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 8

Conread position: 203-586
Cow position: chr22:15048989-15049346 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 46

Conread position: 208-592
Cow position: chr22:36543465-36543083 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 85

Conread position: 209-571
Cow position: chr22:4567119-4567473 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 75

Conread position: 220-658
Cow position: chr22:15497027-15497458 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 29

Conread position: 231-351
Cow position: chr22:36785624-36785505 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 231-691
Cow position: chr22:36784748-36785200 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 18

Conread position: 248-691
Cow position: chr22:10330206-10330638 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 195

Conread position: 307-690
Cow position: chr22:29061901-29062285 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 263
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 72, 13

Conread position: 317-691
Cow position: chr22:41272082-41271707 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 56

Conread position: 436-691
Cow position: chr22:5929659-5929404 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 189
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 124, 39

Conread position: 500-691
Cow position: chr22:5338526-5338321 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 155
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 32, 0

Conread position: 509-691
Cow position: chr22:36192974-36193153 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 141
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 116, 25

Show alignments to all cow chromosomes.