Cow genome map

Conread name: Ova1-OVRM10225D07

Conread position: 4-190
Cow position: chr25:18159200-18159009 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 20, 78

Conread position: 4-327
Cow position: chr25:18179606-18179930 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 159

Conread position: 4-330
Cow position: chr25:24449651-24449328 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 232
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 16, 52

Conread position: 4-337
Cow position: chr25:22150658-22150995 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 156

Conread position: 4-342
Cow position: chr25:33990663-33990325 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 131

Conread position: 4-369
Cow position: chr25:39387218-39387586 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 156

Conread position: 4-396
Cow position: chr25:22197804-22197408 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 64

Conread position: 4-396
Cow position: chr25:25109444-25109032 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 78

Conread position: 4-470
Cow position: chr25:24007490-24007960 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-571
Cow position: chr25:35626635-35626077 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 100

Conread position: 4-638
Cow position: chr25:20633349-20633988 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 158

Conread position: 4-655
Cow position: chr25:29313725-29313077 (view UCSC Genome Browser custom track)
Alignm length: 665
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 133

Conread position: 4-672
Cow position: chr25:2594361-2595029 (view UCSC Genome Browser custom track)
Alignm length: 686
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 67

Conread position: 4-685
Cow position: chr25:18190793-18190097 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 161

Conread position: 4-688
Cow position: chr25:12939625-12938923 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 161

Conread position: 4-690
Cow position: chr25:26281607-26282310 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 159

Conread position: 4-690
Cow position: chr25:28862453-28863158 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 158

Conread position: 4-690
Cow position: chr25:34503647-34502936 (view UCSC Genome Browser custom track)
Alignm length: 716
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 140

Conread position: 4-690
Cow position: chr25:35568302-35567604 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 150

Conread position: 4-690
Cow position: chr25:35755661-35754959 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 152

Conread position: 4-690
Cow position: chr25:41120591-41121287 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 61

Conread position: 4-690
Cow position: chr25:41136151-41135465 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 161

Conread position: 4-691
Cow position: chr25:13959653-13960346 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 544
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 152

Conread position: 4-691
Cow position: chr25:18128820-18129487 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 41

Conread position: 4-691
Cow position: chr25:19337735-19337040 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 87

Conread position: 4-691
Cow position: chr25:20772748-20772052 (view UCSC Genome Browser custom track)
Alignm length: 716
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 87

Conread position: 4-691
Cow position: chr25:26781500-26780799 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-691
Cow position: chr25:27019655-27018950 (view UCSC Genome Browser custom track)
Alignm length: 713
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 161

Conread position: 4-691
Cow position: chr25:29526279-29525580 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-691
Cow position: chr25:29803166-29802458 (view UCSC Genome Browser custom track)
Alignm length: 714
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 159

Conread position: 4-691
Cow position: chr25:35553268-35553955 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 51

Conread position: 4-691
Cow position: chr25:41098613-41097911 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 158

Conread position: 5-332
Cow position: chr25:30810388-30810710 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 228
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 15, 38

Conread position: 5-337
Cow position: chr25:16923552-16923223 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 124

Conread position: 5-647
Cow position: chr25:18489641-18490302 (view UCSC Genome Browser custom track)
Alignm length: 669
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 11

Conread position: 5-672
Cow position: chr25:23740659-23739980 (view UCSC Genome Browser custom track)
Alignm length: 691
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 122

Conread position: 5-690
Cow position: chr25:17657208-17657898 (view UCSC Genome Browser custom track)
Alignm length: 701
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 150

Conread position: 5-690
Cow position: chr25:18886884-18886198 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 158

Conread position: 5-691
Cow position: chr25:392858-393547 (view UCSC Genome Browser custom track)
Alignm length: 715
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 41

Conread position: 5-691
Cow position: chr25:11043206-11043902 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 155

Conread position: 5-691
Cow position: chr25:34509595-34508895 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 65

Conread position: 6-690
Cow position: chr25:25481023-25480330 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 40

Conread position: 7-346
Cow position: chr25:17554886-17554541 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 149

Conread position: 10-658
Cow position: chr25:32578075-32577414 (view UCSC Genome Browser custom track)
Alignm length: 666
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 150

Conread position: 11-332
Cow position: chr25:35561903-35561586 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 224
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 89, 66

Conread position: 16-534
Cow position: chr25:21949396-21949920 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 155

Conread position: 16-672
Cow position: chr25:17561632-17562301 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 149

Conread position: 16-688
Cow position: chr25:33688622-33687923 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 205

Conread position: 18-289
Cow position: chr25:12083229-12082966 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 182
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 83, 58

Conread position: 23-240
Cow position: chr25:12834972-12834758 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 154
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 84, 19

Conread position: 23-431
Cow position: chr25:1025842-1025432 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 264
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 82, 55

Conread position: 23-434
Cow position: chr25:3374037-3373622 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 19

Conread position: 23-623
Cow position: chr25:22431361-22431962 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 383
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 32, 54

Conread position: 23-662
Cow position: chr25:18209094-18208435 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 32

Conread position: 23-685
Cow position: chr25:33575120-33574460 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 133

Conread position: 23-691
Cow position: chr25:11665278-11665950 (view UCSC Genome Browser custom track)
Alignm length: 691
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 140

Conread position: 24-691
Cow position: chr25:7223825-7223145 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 132

Conread position: 24-691
Cow position: chr25:17586414-17585735 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 133

Conread position: 32-690
Cow position: chr25:24655552-24654888 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 46

Conread position: 34-369
Cow position: chr25:34368749-34369082 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 174

Conread position: 35-658
Cow position: chr25:23999563-23998942 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 118

Conread position: 37-690
Cow position: chr25:9395038-9395695 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 118

Conread position: 42-587
Cow position: chr25:28421073-28420527 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 78

Conread position: 42-691
Cow position: chr25:20495196-20495826 (view UCSC Genome Browser custom track)
Alignm length: 660
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 106

Conread position: 43-604
Cow position: chr25:10634377-10633816 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 35

Conread position: 45-691
Cow position: chr25:23462009-23462655 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 75

Conread position: 53-558
Cow position: chr25:35571455-35571965 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 103

Conread position: 53-691
Cow position: chr25:18071873-18072506 (view UCSC Genome Browser custom track)
Alignm length: 652
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 13

Conread position: 55-672
Cow position: chr25:26754922-26755551 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 106

Conread position: 57-685
Cow position: chr25:34673933-34673306 (view UCSC Genome Browser custom track)
Alignm length: 646
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 104

Conread position: 58-670
Cow position: chr25:14011475-14012102 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 118

Conread position: 59-428
Cow position: chr25:27534069-27533697 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 250
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 59, 103

Conread position: 69-691
Cow position: chr25:36350391-36351025 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 83

Conread position: 79-691
Cow position: chr25:10136485-10137100 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 82

Conread position: 101-261
Cow position: chr25:29134409-29134254 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 128
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 56, 0

Conread position: 102-396
Cow position: chr25:34257418-34257128 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 55

Conread position: 102-398
Cow position: chr25:10704144-10704437 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 50

Conread position: 102-664
Cow position: chr25:24670879-24670309 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 366
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 244, 46

Conread position: 104-686
Cow position: chr25:26913927-26914507 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 44

Conread position: 118-651
Cow position: chr25:26930799-26931337 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 39

Conread position: 118-689
Cow position: chr25:26354079-26353500 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 31

Conread position: 123-644
Cow position: chr25:450077-449572 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 22

Conread position: 126-671
Cow position: chr25:3172687-3172157 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 22

Conread position: 133-427
Cow position: chr25:8875820-8875530 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 24

Conread position: 152-689
Cow position: chr25:24637407-24636859 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 14

Conread position: 154-530
Cow position: chr25:9958314-9957942 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 50

Conread position: 155-663
Cow position: chr25:26895809-26896299 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 49

Conread position: 156-691
Cow position: chr25:25509612-25510176 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 47

Conread position: 157-569
Cow position: chr25:11896358-11896774 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 42

Conread position: 157-690
Cow position: chr25:41357057-41356515 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 47

Conread position: 157-691
Cow position: chr25:23326286-23325742 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 47

Conread position: 160-668
Cow position: chr25:23361223-23361743 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 54

Conread position: 162-333
Cow position: chr25:23912779-23912948 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 122
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 162-395
Cow position: chr25:24228741-24228502 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 174
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 177, 42

Conread position: 164-691
Cow position: chr25:26706135-26705595 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 39

Conread position: 166-672
Cow position: chr25:18473958-18474460 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 37

Conread position: 177-420
Cow position: chr25:27536252-27536016 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 174
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 37, 0

Conread position: 184-658
Cow position: chr25:18264964-18265436 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 8

Conread position: 210-391
Cow position: chr25:20073455-20073639 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 58, 92

Conread position: 219-691
Cow position: chr25:19139771-19139285 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 30

Show alignments to all cow chromosomes.