Cow genome map


           Conread name:
           Ova1-OVRM10225D07
        

               Conread position:
               4-199
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               16, 152
               

               Conread position:
               4-208
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               16, 47
               

               Conread position:
               4-240
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               16, 152
               

               Conread position:
               4-249
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               16, 152
               

               Conread position:
               4-294
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 156
               

               Conread position:
               4-314
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               230
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               18, 160
               

               Conread position:
               4-332
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 161
               

               Conread position:
               4-333
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 19
               

               Conread position:
               4-341
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               241
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               16, 172
               

               Conread position:
               4-346
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 156
               

               Conread position:
               4-351
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 156
               

               Conread position:
               4-366
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 158
               

               Conread position:
               4-367
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 156
               

               Conread position:
               4-507
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 156
               

               Conread position:
               4-507
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 62
               

               Conread position:
               4-507
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 161
               

               Conread position:
               4-530
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 64
               

               Conread position:
               4-549
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               358
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               16, 49
               

               Conread position:
               4-603
               

               Cow position:
               
               

               Alignm length:
               617
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 156
               

               Conread position:
               4-617
               

               Cow position:
               
               

               Alignm length:
               624
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 159
               

               Conread position:
               4-643
               

               Cow position:
               
               

               Alignm length:
               659
               

               Alignm identity:
               503
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 39
               

               Conread position:
               4-670
               

               Cow position:
               
               

               Alignm length:
               677
               

               Alignm identity:
               453
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 38
               

               Conread position:
               4-672
               

               Cow position:
               
               

               Alignm length:
               706
               

               Alignm identity:
               452
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               16, 146
               

               Conread position:
               4-672
               

               Cow position:
               
               

               Alignm length:
               693
               

               Alignm identity:
               498
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 151
               

               Conread position:
               4-683
               

               Cow position:
               
               

               Alignm length:
               699
               

               Alignm identity:
               519
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 155
               

               Conread position:
               4-689
               

               Cow position:
               
               

               Alignm length:
               706
               

               Alignm identity:
               526
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 115
               

               Conread position:
               4-689
               

               Cow position:
               
               

               Alignm length:
               709
               

               Alignm identity:
               537
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 67
               

               Conread position:
               4-690
               

               Cow position:
               
               

               Alignm length:
               720
               

               Alignm identity:
               527
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 65
               

               Conread position:
               4-690
               

               Cow position:
               
               

               Alignm length:
               710
               

               Alignm identity:
               534
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 161
               

               Conread position:
               4-690
               

               Cow position:
               
               

               Alignm length:
               709
               

               Alignm identity:
               513
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 156
               

               Conread position:
               4-691
               

               Cow position:
               
               

               Alignm length:
               707
               

               Alignm identity:
               517
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 83
               

               Conread position:
               4-691
               

               Cow position:
               
               

               Alignm length:
               709
               

               Alignm identity:
               534
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 46
               

               Conread position:
               4-691
               

               Cow position:
               
               

               Alignm length:
               709
               

               Alignm identity:
               528
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 156
               

               Conread position:
               4-691
               

               Cow position:
               
               

               Alignm length:
               710
               

               Alignm identity:
               523
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 73
               

               Conread position:
               4-691
               

               Cow position:
               
               

               Alignm length:
               711
               

               Alignm identity:
               535
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 159
               

               Conread position:
               4-691
               

               Cow position:
               
               

               Alignm length:
               709
               

               Alignm identity:
               485
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 172
               

               Conread position:
               4-691
               

               Cow position:
               
               

               Alignm length:
               702
               

               Alignm identity:
               537
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 156
               

               Conread position:
               4-691
               

               Cow position:
               
               

               Alignm length:
               712
               

               Alignm identity:
               525
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 152
               

               Conread position:
               4-691
               

               Cow position:
               
               

               Alignm length:
               711
               

               Alignm identity:
               528
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 132
               

               Conread position:
               4-691
               

               Cow position:
               
               

               Alignm length:
               719
               

               Alignm identity:
               513
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 140
               

               Conread position:
               4-691
               

               Cow position:
               
               

               Alignm length:
               707
               

               Alignm identity:
               531
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 157
               

               Conread position:
               4-691
               

               Cow position:
               
               

               Alignm length:
               711
               

               Alignm identity:
               536
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 156
               

               Conread position:
               4-691
               

               Cow position:
               
               

               Alignm length:
               711
               

               Alignm identity:
               533
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 157
               

               Conread position:
               5-181
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               17, 45
               

               Conread position:
               5-202
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               15, 155
               

               Conread position:
               5-428
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               288
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               15, 152
               

               Conread position:
               5-518
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 157
               

               Conread position:
               5-685
               

               Cow position:
               
               

               Alignm length:
               705
               

               Alignm identity:
               530
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 155
               

               Conread position:
               5-689
               

               Cow position:
               
               

               Alignm length:
               706
               

               Alignm identity:
               524
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 159
               

               Conread position:
               5-691
               

               Cow position:
               
               

               Alignm length:
               705
               

               Alignm identity:
               509
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 104
               

               Conread position:
               5-691
               

               Cow position:
               
               

               Alignm length:
               711
               

               Alignm identity:
               529
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 155
               

               Conread position:
               5-691
               

               Cow position:
               
               

               Alignm length:
               713
               

               Alignm identity:
               521
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 155
               

               Conread position:
               5-691
               

               Cow position:
               
               

               Alignm length:
               710
               

               Alignm identity:
               534
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 155
               

               Conread position:
               5-691
               

               Cow position:
               
               

               Alignm length:
               711
               

               Alignm identity:
               535
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 160
               

               Conread position:
               6-314
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 153
               

               Conread position:
               7-622
               

               Cow position:
               
               

               Alignm length:
               641
               

               Alignm identity:
               458
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 49
               

               Conread position:
               7-640
               

               Cow position:
               
               

               Alignm length:
               646
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 97
               

               Conread position:
               7-691
               

               Cow position:
               
               

               Alignm length:
               709
               

               Alignm identity:
               483
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 123
               

               Conread position:
               9-691
               

               Cow position:
               
               

               Alignm length:
               705
               

               Alignm identity:
               522
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 151
               

               Conread position:
               16-365
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 50
               

               Conread position:
               16-691
               

               Cow position:
               
               

               Alignm length:
               698
               

               Alignm identity:
               508
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 63
               

               Conread position:
               17-530
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 9
               

               Conread position:
               23-453
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               282
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               353, 124
               

               Conread position:
               23-465
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 34
               

               Conread position:
               23-688
               

               Cow position:
               
               

               Alignm length:
               680
               

               Alignm identity:
               443
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 55
               

               Conread position:
               24-691
               

               Cow position:
               
               

               Alignm length:
               686
               

               Alignm identity:
               517
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 137
               

               Conread position:
               24-691
               

               Cow position:
               
               

               Alignm length:
               682
               

               Alignm identity:
               441
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 126
               

               Conread position:
               37-347
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 126
               

               Conread position:
               38-691
               

               Cow position:
               
               

               Alignm length:
               678
               

               Alignm identity:
               500
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 124
               

               Conread position:
               46-415
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 45
               

               Conread position:
               46-691
               

               Cow position:
               
               

               Alignm length:
               665
               

               Alignm identity:
               500
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 115
               

               Conread position:
               55-672
               

               Cow position:
               
               

               Alignm length:
               649
               

               Alignm identity:
               455
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 12
               

               Conread position:
               69-691
               

               Cow position:
               
               

               Alignm length:
               641
               

               Alignm identity:
               486
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 87
               

               Conread position:
               74-691
               

               Cow position:
               
               

               Alignm length:
               633
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 119
               

               Conread position:
               85-446
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 76
               

               Conread position:
               102-280
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               102-691
               

               Cow position:
               
               

               Alignm length:
               599
               

               Alignm identity:
               451
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               274, 53
               

               Conread position:
               104-691
               

               Cow position:
               
               

               Alignm length:
               603
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 88
               

               Conread position:
               111-272
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               115-649
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 42
               

               Conread position:
               116-670
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 43
               

               Conread position:
               117-669
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               344
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               258, 26
               

               Conread position:
               133-384
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               243, 24
               

               Conread position:
               157-365
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               157-559
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 46
               

               Conread position:
               157-639
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               219, 46
               

               Conread position:
               157-659
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               177, 47
               

               Conread position:
               157-690
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               219, 46
               

               Conread position:
               157-691
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 46
               

               Conread position:
               160-685
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 44
               

               Conread position:
               162-507
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               214, 41
               

               Conread position:
               162-691
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               214, 41
               

               Conread position:
               164-689
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               212, 39
               

               Conread position:
               166-673
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 39
               

               Conread position:
               182-437
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               139, 22
               

               Conread position:
               190-691
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               186, 23
               

               Conread position:
               206-510
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               195, 11
               

               Conread position:
               345-690
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 39
               

               Conread position:
               496-691
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               35, 58
               

               Conread position:
               560-690
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               564-691
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               10, 0
               
Show alignments to all cow chromosomes.