Cow genome map

Conread name: Ova1-OVRM10225D07

Conread position: 4-199
Cow position: chr26:18781701-18781501 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 152
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 16, 152

Conread position: 4-208
Cow position: chr26:25189583-25189792 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 158
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 16, 47

Conread position: 4-240
Cow position: chr26:27940974-27941214 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 180
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 16, 152

Conread position: 4-249
Cow position: chr26:367470-367719 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 187
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 16, 152

Conread position: 4-294
Cow position: chr26:3027779-3027486 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-314
Cow position: chr26:6844675-6844360 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 230
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 18, 160

Conread position: 4-332
Cow position: chr26:34271909-34272240 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 161

Conread position: 4-333
Cow position: chr26:21823782-21823462 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 19

Conread position: 4-341
Cow position: chr26:8087908-8088244 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 241
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 16, 172

Conread position: 4-346
Cow position: chr26:1638198-1637853 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-351
Cow position: chr26:4122506-4122856 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-366
Cow position: chr26:23590496-23590859 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 158

Conread position: 4-367
Cow position: chr26:2670936-2670570 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-507
Cow position: chr26:2349333-2348826 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-507
Cow position: chr26:14896840-14897346 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 62

Conread position: 4-507
Cow position: chr26:21535200-21535708 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 161

Conread position: 4-530
Cow position: chr26:6320949-6321479 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 64

Conread position: 4-549
Cow position: chr26:35520563-35520006 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 358
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 16, 49

Conread position: 4-603
Cow position: chr26:35335374-35334764 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-617
Cow position: chr26:12668293-12668895 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 159

Conread position: 4-643
Cow position: chr26:5679369-5680021 (view UCSC Genome Browser custom track)
Alignm length: 659
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 39

Conread position: 4-670
Cow position: chr26:3754880-3755528 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 38

Conread position: 4-672
Cow position: chr26:2605094-2604407 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 452
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 16, 146

Conread position: 4-672
Cow position: chr26:17327000-17327687 (view UCSC Genome Browser custom track)
Alignm length: 693
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 151

Conread position: 4-683
Cow position: chr26:17394053-17393364 (view UCSC Genome Browser custom track)
Alignm length: 699
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 155

Conread position: 4-689
Cow position: chr26:20496374-20497069 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 115

Conread position: 4-689
Cow position: chr26:35423338-35424038 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 67

Conread position: 4-690
Cow position: chr26:9559039-9558328 (view UCSC Genome Browser custom track)
Alignm length: 720
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 65

Conread position: 4-690
Cow position: chr26:17429637-17428933 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 161

Conread position: 4-690
Cow position: chr26:30586508-30585816 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 156

Conread position: 4-691
Cow position: chr26:1347144-1346451 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 83

Conread position: 4-691
Cow position: chr26:1620492-1621190 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 46

Conread position: 4-691
Cow position: chr26:2201372-2202071 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-691
Cow position: chr26:3230307-3231009 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 73

Conread position: 4-691
Cow position: chr26:4729485-4728782 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 159

Conread position: 4-691
Cow position: chr26:10699653-10698967 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 172

Conread position: 4-691
Cow position: chr26:14488415-14487723 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 156

Conread position: 4-691
Cow position: chr26:18804525-18803826 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 152

Conread position: 4-691
Cow position: chr26:18856959-18857658 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 132

Conread position: 4-691
Cow position: chr26:27987756-27987058 (view UCSC Genome Browser custom track)
Alignm length: 719
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 140

Conread position: 4-691
Cow position: chr26:28707221-28706520 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 157

Conread position: 4-691
Cow position: chr26:34264802-34265507 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-691
Cow position: chr26:35122404-35121700 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 157

Conread position: 5-181
Cow position: chr26:4601353-4601173 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 17, 45

Conread position: 5-202
Cow position: chr26:30785614-30785816 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 156
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 15, 155

Conread position: 5-428
Cow position: chr26:18035743-18036161 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 288
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 15, 152

Conread position: 5-518
Cow position: chr26:4752890-4753402 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 157

Conread position: 5-685
Cow position: chr26:26285702-26286397 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 155

Conread position: 5-689
Cow position: chr26:23889250-23889948 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 159

Conread position: 5-691
Cow position: chr26:1088031-1088720 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 104

Conread position: 5-691
Cow position: chr26:1389823-1390525 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 155

Conread position: 5-691
Cow position: chr26:9114876-9115581 (view UCSC Genome Browser custom track)
Alignm length: 713
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 155

Conread position: 5-691
Cow position: chr26:12585699-12584995 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 155

Conread position: 5-691
Cow position: chr26:13807187-13806486 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 160

Conread position: 6-314
Cow position: chr26:19348654-19348348 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 153

Conread position: 7-622
Cow position: chr26:4548450-4549077 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 49

Conread position: 7-640
Cow position: chr26:35394227-35393610 (view UCSC Genome Browser custom track)
Alignm length: 646
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 97

Conread position: 7-691
Cow position: chr26:8872688-8873388 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 123

Conread position: 9-691
Cow position: chr26:8884691-8885385 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 151

Conread position: 16-365
Cow position: chr26:3705501-3705844 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 50

Conread position: 16-691
Cow position: chr26:4324839-4324178 (view UCSC Genome Browser custom track)
Alignm length: 698
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 63

Conread position: 17-530
Cow position: chr26:18934528-18934017 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 9

Conread position: 23-453
Cow position: chr26:11290018-11290436 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 282
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 353, 124

Conread position: 23-465
Cow position: chr26:8654463-8654035 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 34

Conread position: 23-688
Cow position: chr26:25341057-25340403 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 55

Conread position: 24-691
Cow position: chr26:13183173-13183853 (view UCSC Genome Browser custom track)
Alignm length: 686
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 137

Conread position: 24-691
Cow position: chr26:33950506-33949833 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 126

Conread position: 37-347
Cow position: chr26:6425905-6426218 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 126

Conread position: 38-691
Cow position: chr26:34014709-34015381 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 124

Conread position: 46-415
Cow position: chr26:31793613-31793979 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 45

Conread position: 46-691
Cow position: chr26:35191663-35191005 (view UCSC Genome Browser custom track)
Alignm length: 665
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 115

Conread position: 55-672
Cow position: chr26:9841506-9840871 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 12

Conread position: 69-691
Cow position: chr26:30594722-30594087 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 87

Conread position: 74-691
Cow position: chr26:21012043-21012657 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 119

Conread position: 85-446
Cow position: chr26:12258856-12258498 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 76

Conread position: 102-280
Cow position: chr26:3565134-3564961 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 52, 0

Conread position: 102-691
Cow position: chr26:4440809-4440228 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 53

Conread position: 104-691
Cow position: chr26:31138990-31138409 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 88

Conread position: 111-272
Cow position: chr26:386652-386808 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 115-649
Cow position: chr26:21350466-21350996 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 42

Conread position: 116-670
Cow position: chr26:15891936-15892491 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 43

Conread position: 117-669
Cow position: chr26:19564378-19563828 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 344
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 258, 26

Conread position: 133-384
Cow position: chr26:18773289-18773042 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 24

Conread position: 157-365
Cow position: chr26:3199552-3199346 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 156
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 46, 0

Conread position: 157-559
Cow position: chr26:22660280-22659890 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 46

Conread position: 157-639
Cow position: chr26:3537118-3537607 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 46

Conread position: 157-659
Cow position: chr26:20186305-20186806 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 47

Conread position: 157-690
Cow position: chr26:35561065-35560521 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 46

Conread position: 157-691
Cow position: chr26:8809876-8810397 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 46

Conread position: 160-685
Cow position: chr26:1885004-1885541 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 44

Conread position: 162-507
Cow position: chr26:7506712-7506368 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 41

Conread position: 162-691
Cow position: chr26:8083827-8084369 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 41

Conread position: 164-689
Cow position: chr26:22691393-22691927 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 39

Conread position: 166-673
Cow position: chr26:9100974-9100475 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 39

Conread position: 182-437
Cow position: chr26:4600114-4599854 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 195
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 139, 22

Conread position: 190-691
Cow position: chr26:1343264-1342752 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 23

Conread position: 206-510
Cow position: chr26:1614170-1614471 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 11

Conread position: 345-690
Cow position: chr26:12662549-12662206 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 39

Conread position: 496-691
Cow position: chr26:8653784-8653589 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 35, 58

Conread position: 560-690
Cow position: chr26:18918916-18918785 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 65, 0

Conread position: 564-691
Cow position: chr26:8746866-8746736 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 106
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 10, 0

Show alignments to all cow chromosomes.