Cow genome map


           Conread name:
           Ova1-OVRM10225D07
        

               Conread position:
               1-690
               

               Cow position:
               
               

               Alignm length:
               719
               

               Alignm identity:
               493
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 156
               

               Conread position:
               4-175
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               4-182
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               20, 155
               

               Conread position:
               4-205
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               18, 158
               

               Conread position:
               4-221
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               19, 157
               

               Conread position:
               4-231
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               172
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               16, 156
               

               Conread position:
               4-236
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               16, 152
               

               Conread position:
               4-257
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               16, 77
               

               Conread position:
               4-354
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 156
               

               Conread position:
               4-354
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 156
               

               Conread position:
               4-356
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 152
               

               Conread position:
               4-362
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 148
               

               Conread position:
               4-374
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 156
               

               Conread position:
               4-444
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               301
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               18, 67
               

               Conread position:
               4-449
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 92
               

               Conread position:
               4-461
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 132
               

               Conread position:
               4-507
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 156
               

               Conread position:
               4-532
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 156
               

               Conread position:
               4-533
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 156
               

               Conread position:
               4-655
               

               Cow position:
               
               

               Alignm length:
               673
               

               Alignm identity:
               507
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 165
               

               Conread position:
               4-672
               

               Cow position:
               
               

               Alignm length:
               686
               

               Alignm identity:
               509
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 111
               

               Conread position:
               4-672
               

               Cow position:
               
               

               Alignm length:
               688
               

               Alignm identity:
               510
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 163
               

               Conread position:
               4-672
               

               Cow position:
               
               

               Alignm length:
               685
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 152
               

               Conread position:
               4-672
               

               Cow position:
               
               

               Alignm length:
               689
               

               Alignm identity:
               510
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 108
               

               Conread position:
               4-679
               

               Cow position:
               
               

               Alignm length:
               690
               

               Alignm identity:
               483
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 148
               

               Conread position:
               4-682
               

               Cow position:
               
               

               Alignm length:
               697
               

               Alignm identity:
               494
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 78
               

               Conread position:
               4-682
               

               Cow position:
               
               

               Alignm length:
               686
               

               Alignm identity:
               453
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 95
               

               Conread position:
               4-684
               

               Cow position:
               
               

               Alignm length:
               701
               

               Alignm identity:
               516
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 77
               

               Conread position:
               4-686
               

               Cow position:
               
               

               Alignm length:
               702
               

               Alignm identity:
               504
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 48
               

               Conread position:
               4-687
               

               Cow position:
               
               

               Alignm length:
               710
               

               Alignm identity:
               526
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 158
               

               Conread position:
               4-687
               

               Cow position:
               
               

               Alignm length:
               699
               

               Alignm identity:
               480
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 78
               

               Conread position:
               4-690
               

               Cow position:
               
               

               Alignm length:
               703
               

               Alignm identity:
               520
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 158
               

               Conread position:
               4-690
               

               Cow position:
               
               

               Alignm length:
               714
               

               Alignm identity:
               534
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 154
               

               Conread position:
               4-690
               

               Cow position:
               
               

               Alignm length:
               704
               

               Alignm identity:
               528
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 151
               

               Conread position:
               4-690
               

               Cow position:
               
               

               Alignm length:
               710
               

               Alignm identity:
               528
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 51
               

               Conread position:
               4-690
               

               Cow position:
               
               

               Alignm length:
               717
               

               Alignm identity:
               543
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 163
               

               Conread position:
               4-691
               

               Cow position:
               
               

               Alignm length:
               714
               

               Alignm identity:
               529
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 141
               

               Conread position:
               4-691
               

               Cow position:
               
               

               Alignm length:
               706
               

               Alignm identity:
               515
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 149
               

               Conread position:
               4-691
               

               Cow position:
               
               

               Alignm length:
               711
               

               Alignm identity:
               531
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 156
               

               Conread position:
               4-691
               

               Cow position:
               
               

               Alignm length:
               712
               

               Alignm identity:
               529
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 153
               

               Conread position:
               4-691
               

               Cow position:
               
               

               Alignm length:
               716
               

               Alignm identity:
               530
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 157
               

               Conread position:
               4-691
               

               Cow position:
               
               

               Alignm length:
               707
               

               Alignm identity:
               533
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 156
               

               Conread position:
               4-691
               

               Cow position:
               
               

               Alignm length:
               710
               

               Alignm identity:
               523
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 157
               

               Conread position:
               5-277
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               205
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               20, 160
               

               Conread position:
               5-559
               

               Cow position:
               
               

               Alignm length:
               583
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 93
               

               Conread position:
               5-643
               

               Cow position:
               
               

               Alignm length:
               654
               

               Alignm identity:
               482
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 152
               

               Conread position:
               5-644
               

               Cow position:
               
               

               Alignm length:
               650
               

               Alignm identity:
               451
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 93
               

               Conread position:
               5-653
               

               Cow position:
               
               

               Alignm length:
               666
               

               Alignm identity:
               461
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 154
               

               Conread position:
               5-672
               

               Cow position:
               
               

               Alignm length:
               681
               

               Alignm identity:
               501
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 49
               

               Conread position:
               5-691
               

               Cow position:
               
               

               Alignm length:
               723
               

               Alignm identity:
               540
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 155
               

               Conread position:
               5-691
               

               Cow position:
               
               

               Alignm length:
               712
               

               Alignm identity:
               528
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 162
               

               Conread position:
               5-691
               

               Cow position:
               
               

               Alignm length:
               710
               

               Alignm identity:
               535
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 154
               

               Conread position:
               6-691
               

               Cow position:
               
               

               Alignm length:
               709
               

               Alignm identity:
               530
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 154
               

               Conread position:
               7-691
               

               Cow position:
               
               

               Alignm length:
               721
               

               Alignm identity:
               488
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 39
               

               Conread position:
               10-356
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 209
               

               Conread position:
               10-672
               

               Cow position:
               
               

               Alignm length:
               678
               

               Alignm identity:
               501
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 148
               

               Conread position:
               13-437
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 134
               

               Conread position:
               16-447
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 146
               

               Conread position:
               16-685
               

               Cow position:
               
               

               Alignm length:
               679
               

               Alignm identity:
               489
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 141
               

               Conread position:
               21-281
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               81, 98
               

               Conread position:
               21-608
               

               Cow position:
               
               

               Alignm length:
               604
               

               Alignm identity:
               440
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 72
               

               Conread position:
               23-243
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               81, 132
               

               Conread position:
               24-324
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 132
               

               Conread position:
               25-691
               

               Cow position:
               
               

               Alignm length:
               683
               

               Alignm identity:
               508
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 131
               

               Conread position:
               30-217
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               41, 16
               

               Conread position:
               30-690
               

               Cow position:
               
               

               Alignm length:
               676
               

               Alignm identity:
               500
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 34
               

               Conread position:
               31-216
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               74, 46
               

               Conread position:
               35-691
               

               Cow position:
               
               

               Alignm length:
               672
               

               Alignm identity:
               507
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               341, 113
               

               Conread position:
               42-690
               

               Cow position:
               
               

               Alignm length:
               668
               

               Alignm identity:
               499
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 109
               

               Conread position:
               46-331
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               58, 13
               

               Conread position:
               48-689
               

               Cow position:
               
               

               Alignm length:
               656
               

               Alignm identity:
               449
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 32
               

               Conread position:
               52-351
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               220
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               50, 5
               

               Conread position:
               52-684
               

               Cow position:
               
               

               Alignm length:
               651
               

               Alignm identity:
               493
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 102
               

               Conread position:
               102-470
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               274, 55
               

               Conread position:
               102-672
               

               Cow position:
               
               

               Alignm length:
               584
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 109
               

               Conread position:
               103-620
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               273, 54
               

               Conread position:
               103-676
               

               Cow position:
               
               

               Alignm length:
               579
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               185, 38
               

               Conread position:
               108-400
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               268, 44
               

               Conread position:
               109-691
               

               Cow position:
               
               

               Alignm length:
               595
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               260, 48
               

               Conread position:
               118-691
               

               Cow position:
               
               

               Alignm length:
               590
               

               Alignm identity:
               444
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               258, 36
               

               Conread position:
               120-360
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               127-691
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               249, 9
               

               Conread position:
               128-690
               

               Cow position:
               
               

               Alignm length:
               579
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 34
               

               Conread position:
               151-691
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               353, 52
               

               Conread position:
               156-381
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               157-435
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               219, 46
               

               Conread position:
               157-502
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               219, 46
               

               Conread position:
               166-689
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               209, 38
               

               Conread position:
               179-690
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               197, 25
               

               Conread position:
               181-672
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               195, 32
               

               Conread position:
               187-347
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               190-685
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               316, 14
               

               Conread position:
               196-691
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               202, 8
               

               Conread position:
               203-691
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 48
               

               Conread position:
               232-652
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 61
               

               Conread position:
               552-691
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               111
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               10, 30
               
Show alignments to all cow chromosomes.