Cow genome map

Conread name: Ova1-OVRM10225D07

Conread position: 1-402
Cow position: chr29:43518387-43518002 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 284
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 21, 152

Conread position: 1-690
Cow position: chr29:19656707-19657395 (view UCSC Genome Browser custom track)
Alignm length: 713
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 158

Conread position: 4-162
Cow position: chr29:27813219-27813385 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 14, 0

Conread position: 4-192
Cow position: chr29:40294142-40294333 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 16, 156

Conread position: 4-193
Cow position: chr29:13850075-13849880 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 18, 156

Conread position: 4-200
Cow position: chr29:7428305-7428102 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 158

Conread position: 4-201
Cow position: chr29:666597-666395 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 154
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 16, 152

Conread position: 4-208
Cow position: chr29:39424328-39424118 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 158
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 16, 156

Conread position: 4-209
Cow position: chr29:41184206-41183996 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 162
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 18, 156

Conread position: 4-214
Cow position: chr29:5979918-5979702 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 20, 154

Conread position: 4-217
Cow position: chr29:40500180-40499968 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 160
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 25, 77

Conread position: 4-226
Cow position: chr29:43255596-43255375 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 167
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 15, 35

Conread position: 4-228
Cow position: chr29:5426617-5426388 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 172
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 16, 157

Conread position: 4-266
Cow position: chr29:34807350-34807615 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 192
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 13, 151

Conread position: 4-270
Cow position: chr29:6872740-6872474 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 185
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 72, 17

Conread position: 4-274
Cow position: chr29:16596430-16596700 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 192
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 16, 155

Conread position: 4-289
Cow position: chr29:3711832-3712115 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 198
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 16, 40

Conread position: 4-293
Cow position: chr29:32805385-32805677 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 205
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 16, 152

Conread position: 4-309
Cow position: chr29:5960646-5960951 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 229
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 18, 156

Conread position: 4-309
Cow position: chr29:13044830-13044531 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 210
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 20, 40

Conread position: 4-311
Cow position: chr29:31123555-31123245 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-337
Cow position: chr29:10205297-10205619 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 248
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 17, 30

Conread position: 4-337
Cow position: chr29:14082096-14081758 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 69

Conread position: 4-342
Cow position: chr29:40471475-40471816 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 150

Conread position: 4-363
Cow position: chr29:35299730-35300091 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 148

Conread position: 4-428
Cow position: chr29:23755022-23754580 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 291
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 18, 152

Conread position: 4-443
Cow position: chr29:34524512-34524069 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-470
Cow position: chr29:19525479-19525010 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-484
Cow position: chr29:2693255-2693734 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 161

Conread position: 4-498
Cow position: chr29:17137924-17138416 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 90

Conread position: 4-505
Cow position: chr29:10845766-10846271 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 161

Conread position: 4-507
Cow position: chr29:2483718-2484225 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-507
Cow position: chr29:9330727-9331214 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 39

Conread position: 4-507
Cow position: chr29:31094776-31094268 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 155

Conread position: 4-559
Cow position: chr29:15118016-15117454 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-649
Cow position: chr29:22745710-22746367 (view UCSC Genome Browser custom track)
Alignm length: 663
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-672
Cow position: chr29:4200202-4200880 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 62

Conread position: 4-672
Cow position: chr29:28697568-28696889 (view UCSC Genome Browser custom track)
Alignm length: 686
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 156

Conread position: 4-672
Cow position: chr29:42806801-42807474 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 161

Conread position: 4-684
Cow position: chr29:23979521-23980214 (view UCSC Genome Browser custom track)
Alignm length: 700
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 161

Conread position: 4-685
Cow position: chr29:8624386-8623703 (view UCSC Genome Browser custom track)
Alignm length: 701
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 161

Conread position: 4-685
Cow position: chr29:45207322-45208010 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 156

Conread position: 4-686
Cow position: chr29:7723488-7724169 (view UCSC Genome Browser custom track)
Alignm length: 703
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 141

Conread position: 4-686
Cow position: chr29:45626153-45626837 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 70

Conread position: 4-687
Cow position: chr29:10237855-10237147 (view UCSC Genome Browser custom track)
Alignm length: 720
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 42

Conread position: 4-687
Cow position: chr29:15943161-15943851 (view UCSC Genome Browser custom track)
Alignm length: 699
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 154

Conread position: 4-688
Cow position: chr29:2102657-2103354 (view UCSC Genome Browser custom track)
Alignm length: 703
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 161

Conread position: 4-688
Cow position: chr29:19515534-19514827 (view UCSC Genome Browser custom track)
Alignm length: 714
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 155

Conread position: 4-689
Cow position: chr29:13027022-13027720 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 162

Conread position: 4-689
Cow position: chr29:34795049-34794346 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 39

Conread position: 4-689
Cow position: chr29:35002847-35002161 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 156

Conread position: 4-689
Cow position: chr29:40619039-40618342 (view UCSC Genome Browser custom track)
Alignm length: 719
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 172

Conread position: 4-690
Cow position: chr29:45650-44955 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 156

Conread position: 4-690
Cow position: chr29:2838526-2837822 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 161

Conread position: 4-690
Cow position: chr29:5240204-5240909 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 544
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 161

Conread position: 4-690
Cow position: chr29:6263197-6262495 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 160

Conread position: 4-690
Cow position: chr29:6934301-6934997 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 161

Conread position: 4-690
Cow position: chr29:10453005-10452302 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 152

Conread position: 4-690
Cow position: chr29:10644601-10643901 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 161

Conread position: 4-690
Cow position: chr29:10820905-10820201 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 152

Conread position: 4-690
Cow position: chr29:14208746-14208054 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 152

Conread position: 4-690
Cow position: chr29:16347016-16347725 (view UCSC Genome Browser custom track)
Alignm length: 723
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 161

Conread position: 4-690
Cow position: chr29:19620458-19619755 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 155

Conread position: 4-690
Cow position: chr29:20253978-20254678 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 154

Conread position: 4-690
Cow position: chr29:22279185-22279886 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 160

Conread position: 4-690
Cow position: chr29:25929709-25928994 (view UCSC Genome Browser custom track)
Alignm length: 719
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 214

Conread position: 4-690
Cow position: chr29:32542946-32543651 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 153

Conread position: 4-690
Cow position: chr29:32962125-32962821 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 43

Conread position: 4-690
Cow position: chr29:39076907-39076205 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 160

Conread position: 4-691
Cow position: chr29:607827-607133 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-691
Cow position: chr29:726539-727244 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-691
Cow position: chr29:1577160-1576494 (view UCSC Genome Browser custom track)
Alignm length: 701
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 77

Conread position: 4-691
Cow position: chr29:6218983-6218300 (view UCSC Genome Browser custom track)
Alignm length: 700
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 40

Conread position: 4-691
Cow position: chr29:7847199-7847907 (view UCSC Genome Browser custom track)
Alignm length: 714
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 161

Conread position: 4-691
Cow position: chr29:13585026-13585719 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-691
Cow position: chr29:15966743-15966039 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 87

Conread position: 4-691
Cow position: chr29:16064521-16065224 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-691
Cow position: chr29:21226787-21227490 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-691
Cow position: chr29:21430047-21429349 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 78

Conread position: 4-691
Cow position: chr29:21473959-21474664 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 541
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-691
Cow position: chr29:28657560-28656853 (view UCSC Genome Browser custom track)
Alignm length: 713
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 163

Conread position: 4-691
Cow position: chr29:32291410-32292109 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 132

Conread position: 4-691
Cow position: chr29:32556934-32556229 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 155

Conread position: 4-691
Cow position: chr29:32807190-32807874 (view UCSC Genome Browser custom track)
Alignm length: 715
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 157

Conread position: 4-691
Cow position: chr29:35264727-35265432 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-691
Cow position: chr29:42256168-42255464 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-691
Cow position: chr29:45651729-45651032 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 87

Conread position: 5-164
Cow position: chr29:13899477-13899646 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 5-337
Cow position: chr29:15995571-15995236 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 151

Conread position: 5-351
Cow position: chr29:27260301-27259952 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 141

Conread position: 5-493
Cow position: chr29:2429919-2430394 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 154

Conread position: 5-540
Cow position: chr29:13057564-13058090 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 73

Conread position: 5-610
Cow position: chr29:17407941-17408553 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 127

Conread position: 5-647
Cow position: chr29:16036603-16035952 (view UCSC Genome Browser custom track)
Alignm length: 660
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 40

Conread position: 5-686
Cow position: chr29:17153071-17153742 (view UCSC Genome Browser custom track)
Alignm length: 693
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 92

Conread position: 5-688
Cow position: chr29:19890366-19891077 (view UCSC Genome Browser custom track)
Alignm length: 716
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 155

Conread position: 5-689
Cow position: chr29:1478263-1478964 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 155

Conread position: 5-690
Cow position: chr29:7812384-7811682 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 65

Conread position: 5-690
Cow position: chr29:26162024-26161321 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 131

Conread position: 5-690
Cow position: chr29:45462044-45462745 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 160

Conread position: 5-691
Cow position: chr29:31184187-31184891 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 158

Conread position: 5-691
Cow position: chr29:31764851-31765554 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 151

Conread position: 5-691
Cow position: chr29:32352429-32353110 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 155

Conread position: 5-691
Cow position: chr29:32515136-32515843 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 156

Conread position: 5-691
Cow position: chr29:35956493-35955809 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 162

Conread position: 9-671
Cow position: chr29:34737876-34737213 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 73

Conread position: 15-252
Cow position: chr29:15623871-15623639 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 174
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 85, 63

Conread position: 16-670
Cow position: chr29:3585383-3584730 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 142

Conread position: 16-684
Cow position: chr29:32289216-32289884 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 141

Conread position: 18-672
Cow position: chr29:9639720-9639039 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 139

Conread position: 20-691
Cow position: chr29:15942205-15941512 (view UCSC Genome Browser custom track)
Alignm length: 699
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 171

Conread position: 21-571
Cow position: chr29:8666505-8667023 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 135

Conread position: 21-672
Cow position: chr29:2745666-2745018 (view UCSC Genome Browser custom track)
Alignm length: 666
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 31

Conread position: 22-672
Cow position: chr29:8511328-8511964 (view UCSC Genome Browser custom track)
Alignm length: 665
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 35

Conread position: 23-357
Cow position: chr29:2183937-2184270 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 19

Conread position: 23-377
Cow position: chr29:6215921-6216271 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 234
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 27, 131

Conread position: 23-382
Cow position: chr29:4518700-4519057 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 217
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 17, 75

Conread position: 23-395
Cow position: chr29:34538407-34538046 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 239
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 75, 129

Conread position: 23-598
Cow position: chr29:2886827-2886262 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 353, 55

Conread position: 23-688
Cow position: chr29:12797420-12798094 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 140

Conread position: 23-689
Cow position: chr29:2299483-2298813 (view UCSC Genome Browser custom track)
Alignm length: 690
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 138

Conread position: 23-691
Cow position: chr29:9079965-9079289 (view UCSC Genome Browser custom track)
Alignm length: 685
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 133

Conread position: 23-691
Cow position: chr29:22950062-22949392 (view UCSC Genome Browser custom track)
Alignm length: 684
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 129

Conread position: 24-229
Cow position: chr29:648919-649124 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 146
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 79, 28

Conread position: 24-507
Cow position: chr29:15699146-15699629 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 132

Conread position: 24-691
Cow position: chr29:4163523-4164203 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 63

Conread position: 25-658
Cow position: chr29:24806291-24806931 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 116

Conread position: 30-690
Cow position: chr29:43326351-43327029 (view UCSC Genome Browser custom track)
Alignm length: 681
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 177

Conread position: 31-228
Cow position: chr29:32207554-32207751 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 151
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 68, 125

Conread position: 37-664
Cow position: chr29:4864179-4864802 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 117

Conread position: 42-208
Cow position: chr29:30708085-30708253 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 60, 119

Conread position: 42-292
Cow position: chr29:16171251-16171001 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 177
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 60, 110

Conread position: 42-672
Cow position: chr29:40418817-40418196 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 98

Conread position: 46-246
Cow position: chr29:9862089-9861889 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 56, 115

Conread position: 53-449
Cow position: chr29:799826-799430 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 108

Conread position: 69-502
Cow position: chr29:2486151-2485713 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 142

Conread position: 70-691
Cow position: chr29:3329473-3330107 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 86

Conread position: 79-691
Cow position: chr29:30433304-30432680 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 82

Conread position: 94-239
Cow position: chr29:28578646-28578787 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 102-262
Cow position: chr29:5390153-5389997 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 50, 0

Conread position: 102-461
Cow position: chr29:18361682-18361329 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 58

Conread position: 102-672
Cow position: chr29:4217233-4217784 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 46

Conread position: 103-669
Cow position: chr29:21546826-21546257 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 377
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 183, 37

Conread position: 105-550
Cow position: chr29:16013259-16012811 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 103

Conread position: 116-255
Cow position: chr29:35739787-35739652 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 98, 39

Conread position: 119-397
Cow position: chr29:132610-132879 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 194
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 254, 38

Conread position: 125-625
Cow position: chr29:16102178-16101675 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 366, 30

Conread position: 154-637
Cow position: chr29:3169890-3169418 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 51

Conread position: 157-429
Cow position: chr29:27813659-27813920 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 197
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 92, 0

Conread position: 157-691
Cow position: chr29:27310684-27310171 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 47

Conread position: 159-691
Cow position: chr29:40156714-40157259 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 44

Conread position: 162-594
Cow position: chr29:34331456-34331017 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 42

Conread position: 164-382
Cow position: chr29:11159549-11159332 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 39

Conread position: 169-691
Cow position: chr29:27702057-27702592 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 35

Conread position: 178-683
Cow position: chr29:11785993-11786503 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 26

Conread position: 188-326
Cow position: chr29:14038079-14037942 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 98, 16

Conread position: 203-691
Cow position: chr29:13624361-13623859 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 46

Conread position: 224-514
Cow position: chr29:36404255-36404532 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 197
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 152, 25

Conread position: 226-521
Cow position: chr29:35281079-35280801 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 337-691
Cow position: chr29:27259738-27259367 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 9

Conread position: 484-691
Cow position: chr29:87916-87700 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 167
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 78, 0

Conread position: 549-691
Cow position: chr29:22935412-22935562 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 118
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 13, 0

Show alignments to all cow chromosomes.