Cow genome map

Conread name: Ova1-OVRM10225D07

Conread position: 1-689
Cow position: chr5:41391358-41392060 (view UCSC Genome Browser custom track)
Alignm length: 713
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 49

Conread position: 2-311
Cow position: chr5:46706508-46706805 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 204
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 100, 0

Conread position: 3-663
Cow position: chr5:40791472-40792132 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 39

Conread position: 3-671
Cow position: chr5:34524612-34523936 (view UCSC Genome Browser custom track)
Alignm length: 694
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 50

Conread position: 4-182
Cow position: chr5:47342343-47342526 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 17, 156

Conread position: 4-186
Cow position: chr5:26512028-26511841 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 142
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 16, 156

Conread position: 4-192
Cow position: chr5:55630404-55630597 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 20, 165

Conread position: 4-201
Cow position: chr5:74036147-74036349 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 153
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 16, 156

Conread position: 4-214
Cow position: chr5:27549830-27549616 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 158
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 18, 155

Conread position: 4-214
Cow position: chr5:57124140-57124345 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 156
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 16, 59

Conread position: 4-237
Cow position: chr5:10513644-10513407 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 178
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 16, 156

Conread position: 4-237
Cow position: chr5:40347651-40347414 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 170
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 12, 156

Conread position: 4-246
Cow position: chr5:35207146-35206901 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 187
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 18, 158

Conread position: 4-247
Cow position: chr5:34472538-34472300 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 172
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 98, 11

Conread position: 4-247
Cow position: chr5:50688442-50688688 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 185
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 16, 156

Conread position: 4-255
Cow position: chr5:15361794-15362049 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 179
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 16, 155

Conread position: 4-283
Cow position: chr5:14877501-14877221 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 196
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 16, 151

Conread position: 4-293
Cow position: chr5:29826998-29827289 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 209
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 17, 150

Conread position: 4-303
Cow position: chr5:11153829-11153529 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 223
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 16, 156

Conread position: 4-317
Cow position: chr5:46003020-46002703 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 226
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 16, 156

Conread position: 4-324
Cow position: chr5:445147-445469 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-327
Cow position: chr5:59083595-59083280 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 227
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 18, 63

Conread position: 4-328
Cow position: chr5:8177738-8178064 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 156

Conread position: 4-328
Cow position: chr5:18704288-18704617 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 242
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 16, 172

Conread position: 4-329
Cow position: chr5:23684751-23684425 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 223
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 16, 154

Conread position: 4-329
Cow position: chr5:70127420-70127729 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 223
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 104, 16

Conread position: 4-331
Cow position: chr5:41980100-41980427 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 159

Conread position: 4-332
Cow position: chr5:37084244-37083913 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-334
Cow position: chr5:54695172-54694841 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 152

Conread position: 4-337
Cow position: chr5:28948113-28947774 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 242
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 16, 158

Conread position: 4-345
Cow position: chr5:1641162-1640818 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-348
Cow position: chr5:4755098-4754754 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 154

Conread position: 4-351
Cow position: chr5:413074-412731 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 50

Conread position: 4-354
Cow position: chr5:5859588-5859948 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 155

Conread position: 4-354
Cow position: chr5:39448802-39448453 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 244
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 16, 42

Conread position: 4-359
Cow position: chr5:58244166-58243809 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 151

Conread position: 4-362
Cow position: chr5:10813837-10814197 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 64

Conread position: 4-374
Cow position: chr5:32953956-32954329 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 158

Conread position: 4-390
Cow position: chr5:73457802-73458181 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 261
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 16, 151

Conread position: 4-393
Cow position: chr5:57336784-57336391 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-396
Cow position: chr5:25232513-25232124 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 273
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 18, 105

Conread position: 4-404
Cow position: chr5:13531264-13530873 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 265
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 21, 8

Conread position: 4-406
Cow position: chr5:60446297-60445901 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 32

Conread position: 4-409
Cow position: chr5:15316362-15316766 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 152

Conread position: 4-433
Cow position: chr5:34526043-34526460 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 12

Conread position: 4-449
Cow position: chr5:16126675-16127122 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 152

Conread position: 4-454
Cow position: chr5:30844458-30844906 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 161

Conread position: 4-470
Cow position: chr5:54361928-54362397 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 52

Conread position: 4-483
Cow position: chr5:37610312-37609829 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-484
Cow position: chr5:57920555-57921031 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 109

Conread position: 4-502
Cow position: chr5:6615663-6615162 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 161

Conread position: 4-507
Cow position: chr5:31098618-31098111 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 65

Conread position: 4-511
Cow position: chr5:56932188-56931706 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 162

Conread position: 4-530
Cow position: chr5:38661961-38662497 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-531
Cow position: chr5:66909733-66910270 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-544
Cow position: chr5:30156988-30157539 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 162

Conread position: 4-558
Cow position: chr5:10299097-10299661 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-576
Cow position: chr5:23957697-23957121 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 161

Conread position: 4-591
Cow position: chr5:25901832-25901252 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 87

Conread position: 4-652
Cow position: chr5:42507389-42508039 (view UCSC Genome Browser custom track)
Alignm length: 658
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-655
Cow position: chr5:59146004-59146669 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 88

Conread position: 4-667
Cow position: chr5:9235771-9235107 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 153

Conread position: 4-670
Cow position: chr5:64845628-64844961 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 73

Conread position: 4-671
Cow position: chr5:63312886-63312216 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 58

Conread position: 4-672
Cow position: chr5:52830159-52829478 (view UCSC Genome Browser custom track)
Alignm length: 695
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 169

Conread position: 4-684
Cow position: chr5:24644239-24643553 (view UCSC Genome Browser custom track)
Alignm length: 703
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 212

Conread position: 4-686
Cow position: chr5:30293948-30294624 (view UCSC Genome Browser custom track)
Alignm length: 701
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 161

Conread position: 4-686
Cow position: chr5:49521344-49522027 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 77

Conread position: 4-686
Cow position: chr5:62435755-62436447 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 156

Conread position: 4-687
Cow position: chr5:49755696-49754985 (view UCSC Genome Browser custom track)
Alignm length: 724
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 152

Conread position: 4-689
Cow position: chr5:18558773-18558086 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 156

Conread position: 4-689
Cow position: chr5:37379714-37380418 (view UCSC Genome Browser custom track)
Alignm length: 713
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 165

Conread position: 4-689
Cow position: chr5:49117720-49117019 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 52

Conread position: 4-690
Cow position: chr5:443681-442976 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 162

Conread position: 4-690
Cow position: chr5:1339294-1338588 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 153

Conread position: 4-690
Cow position: chr5:2917095-2917790 (view UCSC Genome Browser custom track)
Alignm length: 703
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 159

Conread position: 4-690
Cow position: chr5:3501498-3500795 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 156

Conread position: 4-690
Cow position: chr5:3788857-3789556 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 161

Conread position: 4-690
Cow position: chr5:4387814-4388514 (view UCSC Genome Browser custom track)
Alignm length: 715
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 67

Conread position: 4-690
Cow position: chr5:6152198-6151499 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 11

Conread position: 4-690
Cow position: chr5:7395888-7396576 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 18

Conread position: 4-690
Cow position: chr5:12921028-12921730 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 152

Conread position: 4-690
Cow position: chr5:14636949-14636246 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 156

Conread position: 4-690
Cow position: chr5:19979286-19978582 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 543
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 156

Conread position: 4-690
Cow position: chr5:24101280-24101983 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 87

Conread position: 4-690
Cow position: chr5:24298643-24299346 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 543
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 145

Conread position: 4-690
Cow position: chr5:29742927-29742228 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 156

Conread position: 4-690
Cow position: chr5:32755814-32755118 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 152

Conread position: 4-690
Cow position: chr5:44709750-44709039 (view UCSC Genome Browser custom track)
Alignm length: 723
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 152

Conread position: 4-690
Cow position: chr5:47560927-47560227 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 61

Conread position: 4-690
Cow position: chr5:48805821-48805137 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 156

Conread position: 4-690
Cow position: chr5:52823577-52822875 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-690
Cow position: chr5:58771240-58770539 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 161

Conread position: 4-690
Cow position: chr5:64779378-64778668 (view UCSC Genome Browser custom track)
Alignm length: 716
Alignm identity: 543
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 156

Conread position: 4-690
Cow position: chr5:72856503-72857208 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-691
Cow position: chr5:3970152-3970856 (view UCSC Genome Browser custom track)
Alignm length: 713
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 158

Conread position: 4-691
Cow position: chr5:4963749-4963052 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 151

Conread position: 4-691
Cow position: chr5:5105854-5106557 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 161

Conread position: 4-691
Cow position: chr5:6772197-6772899 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-691
Cow position: chr5:8997398-8996680 (view UCSC Genome Browser custom track)
Alignm length: 724
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 215

Conread position: 4-691
Cow position: chr5:9003481-9002777 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-691
Cow position: chr5:11632356-11631651 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-691
Cow position: chr5:12133231-12133927 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 136

Conread position: 4-691
Cow position: chr5:14543672-14542967 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 544
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 157

Conread position: 4-691
Cow position: chr5:18900965-18901648 (view UCSC Genome Browser custom track)
Alignm length: 700
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 42

Conread position: 4-691
Cow position: chr5:23353376-23354074 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 169

Conread position: 4-691
Cow position: chr5:27178277-27178969 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 208

Conread position: 4-691
Cow position: chr5:29634058-29634763 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-691
Cow position: chr5:31120577-31119856 (view UCSC Genome Browser custom track)
Alignm length: 728
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 152

Conread position: 4-691
Cow position: chr5:34191552-34192253 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 92

Conread position: 4-691
Cow position: chr5:41066654-41067344 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-691
Cow position: chr5:42282800-42283497 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 137

Conread position: 4-691
Cow position: chr5:46685978-46685302 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 76

Conread position: 4-691
Cow position: chr5:46779146-46779849 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 67

Conread position: 4-691
Cow position: chr5:49221863-49221165 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 156

Conread position: 4-691
Cow position: chr5:59064074-59064777 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 5-179
Cow position: chr5:32775443-32775622 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 15, 155

Conread position: 5-222
Cow position: chr5:31284726-31284947 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 15, 155

Conread position: 5-231
Cow position: chr5:10773473-10773245 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 168
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 15, 136

Conread position: 5-253
Cow position: chr5:3200986-3201234 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 179
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 95, 145

Conread position: 5-271
Cow position: chr5:32141648-32141382 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 184
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 20, 120

Conread position: 5-332
Cow position: chr5:1643407-1643731 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 212
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 10, 74

Conread position: 5-332
Cow position: chr5:21522102-21521772 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 160

Conread position: 5-334
Cow position: chr5:27196449-27196117 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 155

Conread position: 5-337
Cow position: chr5:18119848-18119513 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 155

Conread position: 5-368
Cow position: chr5:32089158-32088798 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 64

Conread position: 5-396
Cow position: chr5:59278778-59279164 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 258
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 17, 63

Conread position: 5-470
Cow position: chr5:7276464-7276931 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 155

Conread position: 5-495
Cow position: chr5:3440968-3441443 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 42

Conread position: 5-550
Cow position: chr5:12729507-12728975 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 155

Conread position: 5-558
Cow position: chr5:27655379-27655916 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 77

Conread position: 5-565
Cow position: chr5:26625191-26624630 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 40

Conread position: 5-569
Cow position: chr5:45180458-45179891 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 155

Conread position: 5-631
Cow position: chr5:9091788-9091158 (view UCSC Genome Browser custom track)
Alignm length: 646
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 157

Conread position: 5-669
Cow position: chr5:73444033-73444706 (view UCSC Genome Browser custom track)
Alignm length: 686
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 62

Conread position: 5-670
Cow position: chr5:52605985-52605317 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 10

Conread position: 5-672
Cow position: chr5:7141471-7140791 (view UCSC Genome Browser custom track)
Alignm length: 696
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 108

Conread position: 5-672
Cow position: chr5:37735005-37735684 (view UCSC Genome Browser custom track)
Alignm length: 685
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 155

Conread position: 5-683
Cow position: chr5:41952437-41951744 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 62

Conread position: 5-686
Cow position: chr5:27490594-27491302 (view UCSC Genome Browser custom track)
Alignm length: 715
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 175

Conread position: 5-687
Cow position: chr5:2976416-2977115 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 155

Conread position: 5-690
Cow position: chr5:10854197-10853501 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 155

Conread position: 5-690
Cow position: chr5:23829539-23828864 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 155

Conread position: 5-690
Cow position: chr5:30581967-30582659 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 78

Conread position: 5-691
Cow position: chr5:4434874-4434170 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 155

Conread position: 5-691
Cow position: chr5:5925330-5924643 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 156

Conread position: 5-691
Cow position: chr5:6456033-6455329 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 155

Conread position: 5-691
Cow position: chr5:6585830-6585119 (view UCSC Genome Browser custom track)
Alignm length: 716
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 155

Conread position: 5-691
Cow position: chr5:10066921-10066216 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 156

Conread position: 5-691
Cow position: chr5:46626636-46625941 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 41

Conread position: 5-691
Cow position: chr5:46666704-46667408 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 65

Conread position: 5-691
Cow position: chr5:48225943-48225250 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 173

Conread position: 5-691
Cow position: chr5:51166676-51165976 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 86

Conread position: 5-691
Cow position: chr5:54928289-54927587 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 155

Conread position: 5-691
Cow position: chr5:54930617-54929915 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 155

Conread position: 5-691
Cow position: chr5:58198641-58199343 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 51

Conread position: 5-691
Cow position: chr5:68337863-68337189 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 20

Conread position: 6-690
Cow position: chr5:18249690-18250380 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 153

Conread position: 6-691
Cow position: chr5:5936935-5937640 (view UCSC Genome Browser custom track)
Alignm length: 720
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 99

Conread position: 7-684
Cow position: chr5:49131830-49132512 (view UCSC Genome Browser custom track)
Alignm length: 700
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 43

Conread position: 7-691
Cow position: chr5:37625493-37626180 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 153

Conread position: 8-333
Cow position: chr5:5716420-5716093 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 152

Conread position: 10-482
Cow position: chr5:26076565-26076090 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 61

Conread position: 16-689
Cow position: chr5:28015694-28016388 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 13

Conread position: 16-690
Cow position: chr5:4349351-4348673 (view UCSC Genome Browser custom track)
Alignm length: 699
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 196

Conread position: 16-690
Cow position: chr5:46735633-46734944 (view UCSC Genome Browser custom track)
Alignm length: 697
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 142

Conread position: 20-644
Cow position: chr5:47360868-47361483 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 135

Conread position: 21-312
Cow position: chr5:2706237-2705946 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 205
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 79, 135

Conread position: 21-358
Cow position: chr5:12679930-12679597 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 135

Conread position: 21-687
Cow position: chr5:67653981-67654653 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 126

Conread position: 21-689
Cow position: chr5:41229393-41228714 (view UCSC Genome Browser custom track)
Alignm length: 691
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 132

Conread position: 23-236
Cow position: chr5:58000340-58000547 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 158
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 79, 135

Conread position: 23-376
Cow position: chr5:24219793-24220148 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 140

Conread position: 23-437
Cow position: chr5:42745429-42745834 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 281
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 75, 129

Conread position: 23-668
Cow position: chr5:26057782-26058425 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 57

Conread position: 23-670
Cow position: chr5:17646417-17645775 (view UCSC Genome Browser custom track)
Alignm length: 667
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 55

Conread position: 23-670
Cow position: chr5:69519257-69519907 (view UCSC Genome Browser custom track)
Alignm length: 666
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 138

Conread position: 23-671
Cow position: chr5:59770700-59771355 (view UCSC Genome Browser custom track)
Alignm length: 663
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 35

Conread position: 23-682
Cow position: chr5:40897679-40897033 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 129

Conread position: 23-683
Cow position: chr5:46671267-46671924 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 127

Conread position: 23-688
Cow position: chr5:51745875-51746549 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 138

Conread position: 23-691
Cow position: chr5:48534508-48535171 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 132

Conread position: 24-327
Cow position: chr5:58462400-58462691 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 0

Conread position: 24-359
Cow position: chr5:28222574-28222253 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 243
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 50, 135

Conread position: 24-398
Cow position: chr5:44482258-44482631 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 135

Conread position: 24-689
Cow position: chr5:48025923-48026600 (view UCSC Genome Browser custom track)
Alignm length: 685
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 132

Conread position: 24-691
Cow position: chr5:58191568-58192249 (view UCSC Genome Browser custom track)
Alignm length: 690
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 130

Conread position: 25-343
Cow position: chr5:13808019-13807707 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 195
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 75, 127

Conread position: 25-500
Cow position: chr5:34218906-34218413 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 315
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 40, 130

Conread position: 28-511
Cow position: chr5:6840564-6840064 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 127

Conread position: 29-315
Cow position: chr5:28026115-28026398 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 197
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 62, 127

Conread position: 30-671
Cow position: chr5:26466304-26466932 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 119

Conread position: 30-688
Cow position: chr5:10921501-10922176 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 133

Conread position: 31-690
Cow position: chr5:54786447-54785775 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 122

Conread position: 35-691
Cow position: chr5:10840802-10840134 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 77

Conread position: 42-335
Cow position: chr5:46796357-46796652 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 217
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 54, 49

Conread position: 42-691
Cow position: chr5:4016196-4015538 (view UCSC Genome Browser custom track)
Alignm length: 669
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 114

Conread position: 42-691
Cow position: chr5:54124763-54125404 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 119

Conread position: 44-334
Cow position: chr5:38285963-38286247 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 197
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 59, 34

Conread position: 48-298
Cow position: chr5:29432910-29432666 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 174
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 5, 16

Conread position: 52-684
Cow position: chr5:48575133-48574502 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 98

Conread position: 52-690
Cow position: chr5:21188903-21189551 (view UCSC Genome Browser custom track)
Alignm length: 657
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 88

Conread position: 52-690
Cow position: chr5:48409779-48409122 (view UCSC Genome Browser custom track)
Alignm length: 664
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 101

Conread position: 53-689
Cow position: chr5:710469-709820 (view UCSC Genome Browser custom track)
Alignm length: 655
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 103

Conread position: 55-691
Cow position: chr5:18119287-18118641 (view UCSC Genome Browser custom track)
Alignm length: 652
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 97

Conread position: 58-354
Cow position: chr5:41524584-41524302 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 221
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 46, 61

Conread position: 58-691
Cow position: chr5:58003925-58004558 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 62

Conread position: 68-337
Cow position: chr5:57614495-57614226 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 187
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 13, 85

Conread position: 69-243
Cow position: chr5:1382568-1382742 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 31, 87

Conread position: 69-271
Cow position: chr5:41293511-41293704 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 32, 9

Conread position: 69-478
Cow position: chr5:37424424-37424834 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 92

Conread position: 69-507
Cow position: chr5:50675889-50675451 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 92

Conread position: 69-642
Cow position: chr5:24633340-24632760 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 22

Conread position: 69-691
Cow position: chr5:294963-295595 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 89

Conread position: 69-691
Cow position: chr5:18667005-18667641 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 91

Conread position: 69-691
Cow position: chr5:53076169-53075536 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 86

Conread position: 71-670
Cow position: chr5:22857918-22857326 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 24

Conread position: 79-691
Cow position: chr5:51684926-51684286 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 73

Conread position: 91-690
Cow position: chr5:46817378-46816770 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 61

Conread position: 94-345
Cow position: chr5:15676643-15676890 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 188
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 188, 63

Conread position: 98-691
Cow position: chr5:1059839-1059233 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 105

Conread position: 101-526
Cow position: chr5:6986751-6986326 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 67

Conread position: 102-254
Cow position: chr5:54454170-54454320 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 121, 21

Conread position: 102-335
Cow position: chr5:45702794-45703023 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 173
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 55, 0

Conread position: 102-395
Cow position: chr5:49970574-49970863 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 55

Conread position: 102-532
Cow position: chr5:11357861-11358293 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 55

Conread position: 102-588
Cow position: chr5:2203656-2203167 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 50

Conread position: 102-672
Cow position: chr5:6031720-6032286 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 50

Conread position: 102-672
Cow position: chr5:25928962-25928392 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 53

Conread position: 102-672
Cow position: chr5:49565313-49565873 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 398, 50

Conread position: 102-690
Cow position: chr5:73486162-73485553 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 53

Conread position: 102-691
Cow position: chr5:15761634-15761034 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 45

Conread position: 103-670
Cow position: chr5:53834390-53834959 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 59

Conread position: 103-691
Cow position: chr5:13258338-13258913 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 48

Conread position: 106-685
Cow position: chr5:31634160-31634761 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 46

Conread position: 107-691
Cow position: chr5:29256471-29255880 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 45

Conread position: 107-691
Cow position: chr5:34670343-34669761 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 50

Conread position: 115-457
Cow position: chr5:2699425-2699087 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 42

Conread position: 116-652
Cow position: chr5:35446867-35446341 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 327, 38

Conread position: 118-691
Cow position: chr5:6125411-6124829 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 39

Conread position: 118-691
Cow position: chr5:31709051-31709634 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 39

Conread position: 124-604
Cow position: chr5:21945814-21946291 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 309
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 23, 46

Conread position: 126-526
Cow position: chr5:50604585-50604193 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 31

Conread position: 126-682
Cow position: chr5:33776008-33775468 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 32

Conread position: 127-644
Cow position: chr5:29458683-29459173 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 30

Conread position: 130-420
Cow position: chr5:14905288-14905002 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 25

Conread position: 137-655
Cow position: chr5:6735858-6735345 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 169
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 20, 0

Conread position: 145-614
Cow position: chr5:29768835-29769310 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 9

Conread position: 149-625
Cow position: chr5:46649887-46650359 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 53

Conread position: 151-604
Cow position: chr5:41357055-41356603 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 50

Conread position: 151-673
Cow position: chr5:34299671-34300191 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 53

Conread position: 157-603
Cow position: chr5:38848798-38848346 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 46

Conread position: 157-686
Cow position: chr5:54136851-54136309 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 46

Conread position: 161-627
Cow position: chr5:14782433-14781969 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 43

Conread position: 162-690
Cow position: chr5:25912525-25913051 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 52

Conread position: 164-691
Cow position: chr5:39935883-39936432 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 31

Conread position: 166-690
Cow position: chr5:3544104-3544629 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 37

Conread position: 169-690
Cow position: chr5:24577236-24577769 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 5

Conread position: 170-689
Cow position: chr5:27173519-27174038 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 354, 43

Conread position: 172-670
Cow position: chr5:17026880-17027372 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 32

Conread position: 174-638
Cow position: chr5:5682707-5682234 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 40

Conread position: 174-659
Cow position: chr5:26135469-26134972 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 30

Conread position: 178-690
Cow position: chr5:46676421-46676946 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 26

Conread position: 183-655
Cow position: chr5:15454591-15455056 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 9

Conread position: 194-672
Cow position: chr5:47872284-47871799 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 73

Conread position: 195-691
Cow position: chr5:34683535-34683028 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 18

Conread position: 203-679
Cow position: chr5:4629602-4630076 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 46

Conread position: 203-686
Cow position: chr5:18491238-18491728 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 49

Conread position: 203-691
Cow position: chr5:27907634-27907134 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 46

Conread position: 208-554
Cow position: chr5:69770918-69771252 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 247
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 262, 43

Conread position: 215-691
Cow position: chr5:54952278-54951788 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 34

Conread position: 233-691
Cow position: chr5:1382843-1383307 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 31

Conread position: 249-691
Cow position: chr5:47854712-47855160 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 34

Conread position: 295-691
Cow position: chr5:43991205-43991610 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 43

Conread position: 375-690
Cow position: chr5:35207246-35207569 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 0

Conread position: 487-691
Cow position: chr5:66337973-66338179 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 75, 0

Conread position: 490-690
Cow position: chr5:34886542-34886344 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 42, 25

Show alignments to all cow chromosomes.