Cow genome map

Conread name: Ova1-OVRM10225D07

Conread position: 1-672
Cow position: chrX:13070133-13069458 (view UCSC Genome Browser custom track)
Alignm length: 692
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 155

Conread position: 1-672
Cow position: chrX:13090694-13090019 (view UCSC Genome Browser custom track)
Alignm length: 692
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 155

Conread position: 1-690
Cow position: chrX:18951128-18950427 (view UCSC Genome Browser custom track)
Alignm length: 713
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 135

Conread position: 1-690
Cow position: chrX:21226083-21226786 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 159

Conread position: 1-691
Cow position: chrX:8435595-8434893 (view UCSC Genome Browser custom track)
Alignm length: 713
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 11

Conread position: 3-672
Cow position: chrX:16710573-16711241 (view UCSC Genome Browser custom track)
Alignm length: 686
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 78

Conread position: 3-689
Cow position: chrX:16702288-16702979 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 78

Conread position: 3-689
Cow position: chrX:30053864-30053160 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 157

Conread position: 4-146
Cow position: chrX:2117784-2117634 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 4-184
Cow position: chrX:360134-360320 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 145
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 18, 156

Conread position: 4-194
Cow position: chrX:22126176-22125985 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 137
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 16, 78

Conread position: 4-224
Cow position: chrX:47215013-47214795 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 164
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 19, 42

Conread position: 4-229
Cow position: chrX:28648276-28648047 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 174
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 18, 159

Conread position: 4-231
Cow position: chrX:14459800-14459569 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 175
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 16, 156

Conread position: 4-231
Cow position: chrX:15142555-15142324 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 175
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 18, 66

Conread position: 4-234
Cow position: chrX:23453447-23453213 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 185
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 18, 156

Conread position: 4-240
Cow position: chrX:5281177-5280939 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 171
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 20, 154

Conread position: 4-243
Cow position: chrX:17664592-17664348 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 185
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 18, 157

Conread position: 4-255
Cow position: chrX:9086315-9086570 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 195
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 16, 156

Conread position: 4-267
Cow position: chrX:18243748-18243480 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 203
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 18, 158

Conread position: 4-272
Cow position: chrX:30167475-30167204 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 199
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 16, 41

Conread position: 4-275
Cow position: chrX:20725576-20725850 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 208
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 18, 151

Conread position: 4-301
Cow position: chrX:34553000-34553293 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 219
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 18, 156

Conread position: 4-309
Cow position: chrX:4481304-4481612 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 158

Conread position: 4-318
Cow position: chrX:13431328-13431013 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 227
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 18, 61

Conread position: 4-325
Cow position: chrX:38150205-38150526 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 78

Conread position: 4-331
Cow position: chrX:9260955-9261286 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 233
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 16, 152

Conread position: 4-334
Cow position: chrX:2501194-2501526 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 145

Conread position: 4-344
Cow position: chrX:35023348-35023674 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 242
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 98, 28

Conread position: 4-347
Cow position: chrX:24928400-24928746 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-354
Cow position: chrX:22837587-22837940 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-373
Cow position: chrX:13282072-13282444 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 152

Conread position: 4-386
Cow position: chrX:12464612-12464999 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 156

Conread position: 4-395
Cow position: chrX:39564680-39564287 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 159

Conread position: 4-396
Cow position: chrX:41880516-41880122 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-399
Cow position: chrX:13071840-13071441 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 133

Conread position: 4-399
Cow position: chrX:13092400-13092001 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 133

Conread position: 4-415
Cow position: chrX:43437298-43436879 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 160

Conread position: 4-428
Cow position: chrX:5426695-5427124 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 157

Conread position: 4-443
Cow position: chrX:11458213-11457766 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 160

Conread position: 4-449
Cow position: chrX:5298635-5298186 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-449
Cow position: chrX:38153102-38152667 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 100

Conread position: 4-490
Cow position: chrX:18462955-18463446 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 162

Conread position: 4-496
Cow position: chrX:32129385-32129878 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 98

Conread position: 4-507
Cow position: chrX:16045577-16046085 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-507
Cow position: chrX:29171175-29170669 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-511
Cow position: chrX:37487552-37488067 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 156

Conread position: 4-523
Cow position: chrX:27595621-27595092 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 153

Conread position: 4-532
Cow position: chrX:5294737-5294203 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 78

Conread position: 4-549
Cow position: chrX:16854760-16854205 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 156

Conread position: 4-558
Cow position: chrX:30436013-30435448 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-559
Cow position: chrX:12997305-12996740 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 24

Conread position: 4-600
Cow position: chrX:13888501-13889073 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 378
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 18, 74

Conread position: 4-610
Cow position: chrX:16804260-16803645 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 67

Conread position: 4-619
Cow position: chrX:27497437-27498060 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 161

Conread position: 4-628
Cow position: chrX:22492642-22493272 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 78

Conread position: 4-642
Cow position: chrX:9095248-9095897 (view UCSC Genome Browser custom track)
Alignm length: 656
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 156

Conread position: 4-644
Cow position: chrX:26623197-26622565 (view UCSC Genome Browser custom track)
Alignm length: 653
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 41

Conread position: 4-647
Cow position: chrX:39697374-39698021 (view UCSC Genome Browser custom track)
Alignm length: 656
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 54

Conread position: 4-650
Cow position: chrX:4327083-4326419 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 73

Conread position: 4-650
Cow position: chrX:34094311-34094969 (view UCSC Genome Browser custom track)
Alignm length: 664
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-653
Cow position: chrX:26617736-26618390 (view UCSC Genome Browser custom track)
Alignm length: 667
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-653
Cow position: chrX:32328814-32329473 (view UCSC Genome Browser custom track)
Alignm length: 669
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 52

Conread position: 4-656
Cow position: chrX:23222423-23221776 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 161

Conread position: 4-665
Cow position: chrX:30137250-30136592 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 158

Conread position: 4-669
Cow position: chrX:11743877-11744549 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-670
Cow position: chrX:34008391-34009034 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 88

Conread position: 4-671
Cow position: chrX:3406731-3406057 (view UCSC Genome Browser custom track)
Alignm length: 693
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 42

Conread position: 4-671
Cow position: chrX:3581543-3582231 (view UCSC Genome Browser custom track)
Alignm length: 696
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 158

Conread position: 4-672
Cow position: chrX:7484412-7485092 (view UCSC Genome Browser custom track)
Alignm length: 686
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-672
Cow position: chrX:27591415-27590745 (view UCSC Genome Browser custom track)
Alignm length: 681
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 156

Conread position: 4-682
Cow position: chrX:26442640-26441964 (view UCSC Genome Browser custom track)
Alignm length: 697
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 130

Conread position: 4-684
Cow position: chrX:29891712-29892390 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 65

Conread position: 4-686
Cow position: chrX:4767311-4767989 (view UCSC Genome Browser custom track)
Alignm length: 695
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 158

Conread position: 4-686
Cow position: chrX:31728082-31728766 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 44

Conread position: 4-686
Cow position: chrX:35287051-35287723 (view UCSC Genome Browser custom track)
Alignm length: 694
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 372, 63

Conread position: 4-687
Cow position: chrX:24175339-24174653 (view UCSC Genome Browser custom track)
Alignm length: 696
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 150

Conread position: 4-689
Cow position: chrX:2382071-2382774 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 146

Conread position: 4-689
Cow position: chrX:3373246-3372545 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 152

Conread position: 4-689
Cow position: chrX:23021919-23022621 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 160

Conread position: 4-689
Cow position: chrX:30166055-30165363 (view UCSC Genome Browser custom track)
Alignm length: 703
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-689
Cow position: chrX:30965381-30964678 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-690
Cow position: chrX:1549571-1550274 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 39

Conread position: 4-690
Cow position: chrX:2480023-2479318 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 156

Conread position: 4-690
Cow position: chrX:4623348-4622645 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 161

Conread position: 4-690
Cow position: chrX:4906391-4905681 (view UCSC Genome Browser custom track)
Alignm length: 719
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 162

Conread position: 4-690
Cow position: chrX:5247999-5248694 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 41

Conread position: 4-690
Cow position: chrX:7552196-7551492 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 161

Conread position: 4-690
Cow position: chrX:11976841-11976137 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 161

Conread position: 4-690
Cow position: chrX:13406681-13405981 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 156

Conread position: 4-690
Cow position: chrX:21582047-21582752 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 161

Conread position: 4-690
Cow position: chrX:22539429-22538724 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 157

Conread position: 4-690
Cow position: chrX:22810501-22811199 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 158

Conread position: 4-690
Cow position: chrX:23039376-23038684 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 42

Conread position: 4-690
Cow position: chrX:23279632-23280318 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 161

Conread position: 4-690
Cow position: chrX:23395212-23395916 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 159

Conread position: 4-690
Cow position: chrX:24589123-24588427 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 157

Conread position: 4-690
Cow position: chrX:26530580-26531282 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 547
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 79

Conread position: 4-690
Cow position: chrX:27317836-27318540 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 155

Conread position: 4-690
Cow position: chrX:27978217-27977525 (view UCSC Genome Browser custom track)
Alignm length: 703
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 27

Conread position: 4-690
Cow position: chrX:29099025-29099726 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 156

Conread position: 4-690
Cow position: chrX:29916738-29916037 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 10

Conread position: 4-690
Cow position: chrX:30090428-30089741 (view UCSC Genome Browser custom track)
Alignm length: 700
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 64

Conread position: 4-690
Cow position: chrX:30181319-30180618 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 158

Conread position: 4-690
Cow position: chrX:30229506-30228805 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 156

Conread position: 4-690
Cow position: chrX:32145651-32144959 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 161

Conread position: 4-691
Cow position: chrX:3360427-3361131 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 155

Conread position: 4-691
Cow position: chrX:4342357-4343061 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-691
Cow position: chrX:5321106-5320408 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 41

Conread position: 4-691
Cow position: chrX:5332826-5332123 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-691
Cow position: chrX:5360615-5361320 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-691
Cow position: chrX:5865750-5866456 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 157

Conread position: 4-691
Cow position: chrX:6580540-6581244 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-691
Cow position: chrX:7096062-7096768 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 158

Conread position: 4-691
Cow position: chrX:7754512-7755215 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 46

Conread position: 4-691
Cow position: chrX:9127660-9128366 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-691
Cow position: chrX:9170000-9169304 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-691
Cow position: chrX:11146731-11146023 (view UCSC Genome Browser custom track)
Alignm length: 714
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 162

Conread position: 4-691
Cow position: chrX:11409729-11409024 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-691
Cow position: chrX:11462388-11461686 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 161

Conread position: 4-691
Cow position: chrX:12144704-12145412 (view UCSC Genome Browser custom track)
Alignm length: 714
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-691
Cow position: chrX:12308157-12307452 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-691
Cow position: chrX:12359496-12360198 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 40

Conread position: 4-691
Cow position: chrX:13929128-13928441 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 152

Conread position: 4-691
Cow position: chrX:14125639-14124936 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 146

Conread position: 4-691
Cow position: chrX:15261010-15260309 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 161

Conread position: 4-691
Cow position: chrX:15978346-15977643 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 161

Conread position: 4-691
Cow position: chrX:16525409-16526100 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 102

Conread position: 4-691
Cow position: chrX:16809207-16808504 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 67

Conread position: 4-691
Cow position: chrX:18657199-18656495 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 155

Conread position: 4-691
Cow position: chrX:19398383-19399088 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 543
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 152

Conread position: 4-691
Cow position: chrX:19474543-19473849 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-691
Cow position: chrX:19608282-19608986 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-691
Cow position: chrX:20357394-20356685 (view UCSC Genome Browser custom track)
Alignm length: 715
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 156

Conread position: 4-691
Cow position: chrX:21389183-21389888 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 161

Conread position: 4-691
Cow position: chrX:21591898-21592601 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 547
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 156

Conread position: 4-691
Cow position: chrX:21793196-21793901 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-691
Cow position: chrX:22077735-22077032 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-691
Cow position: chrX:23573202-23572506 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 66

Conread position: 4-691
Cow position: chrX:24412633-24413340 (view UCSC Genome Browser custom track)
Alignm length: 715
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 46

Conread position: 4-691
Cow position: chrX:24468517-24467815 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 153

Conread position: 4-691
Cow position: chrX:25450941-25451634 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 156

Conread position: 4-691
Cow position: chrX:26231153-26230448 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 541
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-691
Cow position: chrX:26274751-26275448 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 108

Conread position: 4-691
Cow position: chrX:26446705-26447389 (view UCSC Genome Browser custom track)
Alignm length: 703
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 145

Conread position: 4-691
Cow position: chrX:28519107-28518410 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 153

Conread position: 4-691
Cow position: chrX:28606479-28605786 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 156

Conread position: 4-691
Cow position: chrX:28753731-28753030 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-691
Cow position: chrX:29225083-29225788 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-691
Cow position: chrX:29880674-29879970 (view UCSC Genome Browser custom track)
Alignm length: 714
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 153

Conread position: 4-691
Cow position: chrX:29911940-29912649 (view UCSC Genome Browser custom track)
Alignm length: 717
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 162

Conread position: 4-691
Cow position: chrX:30059503-30060198 (view UCSC Genome Browser custom track)
Alignm length: 713
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 67

Conread position: 4-691
Cow position: chrX:30164625-30163928 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-691
Cow position: chrX:31495343-31496046 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 146

Conread position: 4-691
Cow position: chrX:31979234-31978531 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-691
Cow position: chrX:37851743-37852449 (view UCSC Genome Browser custom track)
Alignm length: 714
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-691
Cow position: chrX:39561054-39560342 (view UCSC Genome Browser custom track)
Alignm length: 719
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 47

Conread position: 4-691
Cow position: chrX:39713158-39713861 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 46

Conread position: 4-691
Cow position: chrX:41847928-41847220 (view UCSC Genome Browser custom track)
Alignm length: 713
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 204

Conread position: 5-217
Cow position: chrX:40694096-40693880 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 154
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 15, 155

Conread position: 5-248
Cow position: chrX:37814757-37815004 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 185
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 15, 155

Conread position: 5-277
Cow position: chrX:12345543-12345823 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 205
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 15, 160

Conread position: 5-308
Cow position: chrX:46295974-46296278 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 155

Conread position: 5-342
Cow position: chrX:21750894-21750563 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 28

Conread position: 5-346
Cow position: chrX:3418610-3418267 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 45

Conread position: 5-346
Cow position: chrX:3465755-3465411 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 157

Conread position: 5-354
Cow position: chrX:5549987-5550339 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 155

Conread position: 5-384
Cow position: chrX:29094708-29094329 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 151

Conread position: 5-422
Cow position: chrX:45112413-45112828 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 155

Conread position: 5-447
Cow position: chrX:5640267-5639838 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 100

Conread position: 5-531
Cow position: chrX:21892115-21892650 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 32

Conread position: 5-532
Cow position: chrX:33829650-33830179 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 155

Conread position: 5-536
Cow position: chrX:24734276-24734807 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 51

Conread position: 5-608
Cow position: chrX:26756033-26755422 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 155

Conread position: 5-643
Cow position: chrX:22612016-22612659 (view UCSC Genome Browser custom track)
Alignm length: 657
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 146

Conread position: 5-672
Cow position: chrX:672384-671708 (view UCSC Genome Browser custom track)
Alignm length: 685
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 51

Conread position: 5-672
Cow position: chrX:31201447-31202126 (view UCSC Genome Browser custom track)
Alignm length: 686
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 160

Conread position: 5-674
Cow position: chrX:29791197-29790532 (view UCSC Genome Browser custom track)
Alignm length: 686
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 41

Conread position: 5-684
Cow position: chrX:16360396-16359704 (view UCSC Genome Browser custom track)
Alignm length: 703
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 150

Conread position: 5-685
Cow position: chrX:17782111-17782804 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 77

Conread position: 5-685
Cow position: chrX:29941787-29942455 (view UCSC Genome Browser custom track)
Alignm length: 695
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 117

Conread position: 5-687
Cow position: chrX:10529178-10528480 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 155

Conread position: 5-689
Cow position: chrX:16041070-16040371 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 51

Conread position: 5-690
Cow position: chrX:21832497-21833178 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 65

Conread position: 5-690
Cow position: chrX:22565078-22564378 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 155

Conread position: 5-690
Cow position: chrX:23387941-23387229 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 170

Conread position: 5-691
Cow position: chrX:2560341-2559650 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 151

Conread position: 5-691
Cow position: chrX:2579027-2579729 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 155

Conread position: 5-691
Cow position: chrX:2813869-2813172 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 155

Conread position: 5-691
Cow position: chrX:8640394-8641098 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 160

Conread position: 5-691
Cow position: chrX:10867243-10866560 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 51

Conread position: 5-691
Cow position: chrX:14461924-14462623 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 158

Conread position: 5-691
Cow position: chrX:14597463-14598156 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 155

Conread position: 5-691
Cow position: chrX:14782739-14782035 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 155

Conread position: 5-691
Cow position: chrX:16035901-16035203 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 150

Conread position: 5-691
Cow position: chrX:16278265-16278962 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 156

Conread position: 5-691
Cow position: chrX:17054177-17054879 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 155

Conread position: 5-691
Cow position: chrX:18222019-18222723 (view UCSC Genome Browser custom track)
Alignm length: 713
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 155

Conread position: 5-691
Cow position: chrX:23134205-23134889 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 153

Conread position: 5-691
Cow position: chrX:24770250-24769547 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 155

Conread position: 5-691
Cow position: chrX:27304537-27305239 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 155

Conread position: 5-691
Cow position: chrX:27423662-27422973 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 133

Conread position: 5-691
Cow position: chrX:28587588-28588281 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 161

Conread position: 5-691
Cow position: chrX:32064561-32063861 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 155

Conread position: 5-691
Cow position: chrX:35532462-35533164 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 155

Conread position: 5-691
Cow position: chrX:36194702-36195402 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 155

Conread position: 5-691
Cow position: chrX:39548009-39548709 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 155

Conread position: 6-566
Cow position: chrX:6855079-6854539 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 102

Conread position: 6-689
Cow position: chrX:28556977-28557664 (view UCSC Genome Browser custom track)
Alignm length: 701
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 65

Conread position: 6-690
Cow position: chrX:24483754-24483058 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 158

Conread position: 6-690
Cow position: chrX:36536122-36535426 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 159

Conread position: 7-437
Cow position: chrX:16023685-16024113 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 73

Conread position: 7-456
Cow position: chrX:38588302-38587853 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 155

Conread position: 7-487
Cow position: chrX:24444446-24443963 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 154

Conread position: 7-647
Cow position: chrX:27983745-27983094 (view UCSC Genome Browser custom track)
Alignm length: 660
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 158

Conread position: 7-672
Cow position: chrX:2009097-2008417 (view UCSC Genome Browser custom track)
Alignm length: 691
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 221

Conread position: 7-672
Cow position: chrX:6236225-6235571 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 21

Conread position: 7-686
Cow position: chrX:42223142-42222470 (view UCSC Genome Browser custom track)
Alignm length: 693
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 154

Conread position: 7-691
Cow position: chrX:9010942-9011637 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 153

Conread position: 9-690
Cow position: chrX:15621921-15621223 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 151

Conread position: 10-649
Cow position: chrX:4300325-4299696 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 145

Conread position: 13-271
Cow position: chrX:25406132-25405877 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 180
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 139, 87

Conread position: 15-671
Cow position: chrX:6044826-6044184 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 36

Conread position: 16-643
Cow position: chrX:15122542-15121905 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 142

Conread position: 16-690
Cow position: chrX:41155932-41156620 (view UCSC Genome Browser custom track)
Alignm length: 695
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 146

Conread position: 16-691
Cow position: chrX:16781904-16782590 (view UCSC Genome Browser custom track)
Alignm length: 697
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 143

Conread position: 16-691
Cow position: chrX:30135693-30135037 (view UCSC Genome Browser custom track)
Alignm length: 695
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 141

Conread position: 18-691
Cow position: chrX:37080891-37080209 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 138

Conread position: 21-678
Cow position: chrX:28879950-28879301 (view UCSC Genome Browser custom track)
Alignm length: 667
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 135

Conread position: 21-691
Cow position: chrX:20800415-20801091 (view UCSC Genome Browser custom track)
Alignm length: 689
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 135

Conread position: 22-492
Cow position: chrX:4557959-4558417 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 84

Conread position: 23-194
Cow position: chrX:3144432-3144601 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 79, 44

Conread position: 23-200
Cow position: chrX:20133538-20133370 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 75, 0

Conread position: 23-320
Cow position: chrX:22119377-22119081 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 12

Conread position: 23-381
Cow position: chrX:39387839-39387482 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 232
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 72, 182

Conread position: 23-391
Cow position: chrX:21318077-21318448 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 50

Conread position: 23-407
Cow position: chrX:387766-388145 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 249
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 75, 5

Conread position: 23-580
Cow position: chrX:40828473-40827919 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 125

Conread position: 23-672
Cow position: chrX:10410438-10409802 (view UCSC Genome Browser custom track)
Alignm length: 661
Alignm identity: 402
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 53, 64

Conread position: 23-682
Cow position: chrX:27070464-27071139 (view UCSC Genome Browser custom track)
Alignm length: 685
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 19

Conread position: 23-685
Cow position: chrX:28132733-28133394 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 5

Conread position: 23-691
Cow position: chrX:17891173-17891857 (view UCSC Genome Browser custom track)
Alignm length: 692
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 104

Conread position: 23-691
Cow position: chrX:20652053-20652725 (view UCSC Genome Browser custom track)
Alignm length: 689
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 29

Conread position: 24-337
Cow position: chrX:25016553-25016244 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 195
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 39, 46

Conread position: 24-346
Cow position: chrX:1948800-1948479 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 131

Conread position: 24-367
Cow position: chrX:2487276-2487614 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 240
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 76, 116

Conread position: 24-390
Cow position: chrX:21646645-21646284 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 28

Conread position: 24-575
Cow position: chrX:24321998-24321440 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 98

Conread position: 24-618
Cow position: chrX:7120236-7120837 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 133

Conread position: 24-658
Cow position: chrX:21494065-21494684 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 137

Conread position: 24-672
Cow position: chrX:22579747-22579102 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 127

Conread position: 24-686
Cow position: chrX:28667323-28666662 (view UCSC Genome Browser custom track)
Alignm length: 685
Alignm identity: 425
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 31, 66

Conread position: 24-691
Cow position: chrX:21343025-21343706 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 132

Conread position: 24-691
Cow position: chrX:30836016-30836697 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 132

Conread position: 26-507
Cow position: chrX:22616743-22616259 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 136

Conread position: 28-289
Cow position: chrX:12312368-12312108 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 193
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 73, 128

Conread position: 29-690
Cow position: chrX:18024358-18023683 (view UCSC Genome Browser custom track)
Alignm length: 681
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 123

Conread position: 30-246
Cow position: chrX:31972486-31972274 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 150
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 78, 36

Conread position: 30-423
Cow position: chrX:30286046-30286434 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 126

Conread position: 30-672
Cow position: chrX:38962214-38961565 (view UCSC Genome Browser custom track)
Alignm length: 659
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 125

Conread position: 30-685
Cow position: chrX:7572026-7572685 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 120

Conread position: 30-690
Cow position: chrX:5354665-5353994 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 131

Conread position: 31-254
Cow position: chrX:45375091-45374881 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 164
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 86, 73

Conread position: 31-415
Cow position: chrX:302759-303137 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 252
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 71, 21

Conread position: 31-679
Cow position: chrX:22818711-22819370 (view UCSC Genome Browser custom track)
Alignm length: 667
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 109

Conread position: 35-691
Cow position: chrX:3082493-3081821 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 121

Conread position: 35-691
Cow position: chrX:29908562-29907892 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 121

Conread position: 39-670
Cow position: chrX:34221424-34222048 (view UCSC Genome Browser custom track)
Alignm length: 657
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 121

Conread position: 42-500
Cow position: chrX:12185746-12186206 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 119

Conread position: 42-689
Cow position: chrX:322563-323223 (view UCSC Genome Browser custom track)
Alignm length: 668
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 114

Conread position: 42-690
Cow position: chrX:24293016-24292370 (view UCSC Genome Browser custom track)
Alignm length: 668
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 113

Conread position: 42-691
Cow position: chrX:5290037-5289376 (view UCSC Genome Browser custom track)
Alignm length: 668
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 115

Conread position: 42-691
Cow position: chrX:40070956-40070300 (view UCSC Genome Browser custom track)
Alignm length: 666
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 21

Conread position: 43-555
Cow position: chrX:24462790-24462278 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 113

Conread position: 43-689
Cow position: chrX:27754073-27754737 (view UCSC Genome Browser custom track)
Alignm length: 671
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 116

Conread position: 43-691
Cow position: chrX:2047765-2048422 (view UCSC Genome Browser custom track)
Alignm length: 668
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 35

Conread position: 44-571
Cow position: chrX:2184889-2185406 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 108

Conread position: 44-672
Cow position: chrX:25818166-25817537 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 60

Conread position: 46-658
Cow position: chrX:24345700-24346320 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 115

Conread position: 52-604
Cow position: chrX:16067715-16067166 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 345
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 46, 26

Conread position: 52-691
Cow position: chrX:21767461-21768114 (view UCSC Genome Browser custom track)
Alignm length: 663
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 99

Conread position: 57-691
Cow position: chrX:38231606-38230957 (view UCSC Genome Browser custom track)
Alignm length: 655
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 105

Conread position: 59-470
Cow position: chrX:11951106-11950695 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 102

Conread position: 69-309
Cow position: chrX:41305514-41305275 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 176
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 31, 87

Conread position: 69-430
Cow position: chrX:9067745-9068100 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 238
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 300, 79

Conread position: 70-507
Cow position: chrX:9535219-9535655 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 8

Conread position: 70-507
Cow position: chrX:9836588-9837027 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 8

Conread position: 70-672
Cow position: chrX:24316491-24317107 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 86

Conread position: 72-691
Cow position: chrX:29082753-29083377 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 84

Conread position: 73-391
Cow position: chrX:19877522-19877838 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 223
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 30, 75

Conread position: 74-399
Cow position: chrX:4134234-4133910 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 87

Conread position: 75-691
Cow position: chrX:29759381-29759997 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 81

Conread position: 78-233
Cow position: chrX:22577774-22577615 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 26, 80

Conread position: 78-276
Cow position: chrX:39694492-39694684 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 24, 76

Conread position: 95-417
Cow position: chrX:45042377-45042068 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 13

Conread position: 102-337
Cow position: chrX:15176426-15176196 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 177
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 50, 0

Conread position: 102-558
Cow position: chrX:20741569-20742022 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 56

Conread position: 102-597
Cow position: chrX:5375565-5375068 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 55

Conread position: 102-686
Cow position: chrX:27615524-27616113 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 55

Conread position: 102-686
Cow position: chrX:29287707-29288290 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 52

Conread position: 102-691
Cow position: chrX:23342280-23341682 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 45

Conread position: 103-452
Cow position: chrX:13415718-13415385 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 54

Conread position: 103-691
Cow position: chrX:30200275-30199682 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 49

Conread position: 104-375
Cow position: chrX:6247503-6247234 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 193
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 249, 37

Conread position: 104-395
Cow position: chrX:25449199-25449488 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 195
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 206, 14

Conread position: 104-672
Cow position: chrX:5365877-5365310 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 16

Conread position: 107-691
Cow position: chrX:43074603-43075185 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 44

Conread position: 109-688
Cow position: chrX:18193409-18193997 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 10

Conread position: 111-456
Cow position: chrX:15590706-15590371 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 35

Conread position: 115-414
Cow position: chrX:37839872-37840167 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 42

Conread position: 116-554
Cow position: chrX:24446679-24447119 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 260, 41

Conread position: 116-558
Cow position: chrX:19396957-19397395 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 283
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 137, 29

Conread position: 116-690
Cow position: chrX:20953257-20953842 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 89

Conread position: 116-691
Cow position: chrX:3650102-3649513 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 41

Conread position: 118-430
Cow position: chrX:41906004-41905695 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 214
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 253, 8

Conread position: 120-530
Cow position: chrX:15349484-15349079 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 37

Conread position: 127-691
Cow position: chrX:5647368-5646794 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 30

Conread position: 127-691
Cow position: chrX:21661754-21662346 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 30

Conread position: 127-691
Cow position: chrX:23985986-23986560 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 30

Conread position: 128-447
Cow position: chrX:31964667-31964978 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 22

Conread position: 129-671
Cow position: chrX:36691580-36692117 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 77

Conread position: 139-640
Cow position: chrX:6656269-6655783 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 15

Conread position: 151-690
Cow position: chrX:29849860-29849320 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 53

Conread position: 153-689
Cow position: chrX:15151908-15151367 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 85

Conread position: 154-672
Cow position: chrX:38228549-38228028 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 8

Conread position: 156-691
Cow position: chrX:21685372-21685929 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 103

Conread position: 157-448
Cow position: chrX:13912179-13911892 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 204
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 222, 56

Conread position: 157-484
Cow position: chrX:864871-865195 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 46

Conread position: 157-584
Cow position: chrX:17228738-17229160 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 46

Conread position: 157-671
Cow position: chrX:7276727-7277228 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 46

Conread position: 157-672
Cow position: chrX:14802056-14801535 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 56

Conread position: 157-689
Cow position: chrX:27758472-27759015 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 46

Conread position: 157-691
Cow position: chrX:6371943-6372491 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 46

Conread position: 157-691
Cow position: chrX:9642665-9642122 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 46

Conread position: 157-691
Cow position: chrX:16085895-16085348 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 46

Conread position: 157-691
Cow position: chrX:21414630-21415177 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 46

Conread position: 157-691
Cow position: chrX:34760829-34761376 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 36

Conread position: 159-685
Cow position: chrX:28633689-28633171 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 44

Conread position: 162-678
Cow position: chrX:502919-502424 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 42

Conread position: 162-686
Cow position: chrX:10413202-10412679 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 41

Conread position: 162-688
Cow position: chrX:22869587-22870129 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 41

Conread position: 162-691
Cow position: chrX:44193668-44193130 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 40

Conread position: 163-440
Cow position: chrX:42042576-42042301 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 178
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 180, 40

Conread position: 164-556
Cow position: chrX:9228131-9227735 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 39

Conread position: 164-691
Cow position: chrX:20020342-20020889 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 39

Conread position: 164-691
Cow position: chrX:30172936-30172397 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 40

Conread position: 166-431
Cow position: chrX:23523021-23522766 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 178
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 170, 50

Conread position: 176-687
Cow position: chrX:6279821-6279302 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 28

Conread position: 179-689
Cow position: chrX:31378726-31379263 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 347
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 191, 25

Conread position: 180-532
Cow position: chrX:13056812-13057165 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 247
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 96, 69

Conread position: 181-599
Cow position: chrX:38998634-38999042 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 23

Conread position: 183-369
Cow position: chrX:900841-900656 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 14, 24

Conread position: 184-510
Cow position: chrX:8104716-8104393 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 20

Conread position: 189-354
Cow position: chrX:32585274-32585113 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 15, 0

Conread position: 190-691
Cow position: chrX:6453494-6454007 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 23

Conread position: 196-336
Cow position: chrX:42009396-42009534 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 92, 8

Conread position: 198-686
Cow position: chrX:4406689-4407184 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 6

Conread position: 198-688
Cow position: chrX:45401198-45400717 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 6

Conread position: 198-691
Cow position: chrX:34442624-34442132 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 6

Conread position: 199-648
Cow position: chrX:6201337-6201788 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 50

Conread position: 203-461
Cow position: chrX:27028939-27029196 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 49

Conread position: 204-413
Cow position: chrX:721668-721877 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 165
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 172, 45

Conread position: 225-686
Cow position: chrX:15140700-15140239 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 39

Conread position: 441-691
Cow position: chrX:16021329-16021072 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 176
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 53, 0

Show alignments to all cow chromosomes.