Cow genome map

Conread name: OvaN-UMC-pnatal4-008-h10

Conread position: 1-141
Cow position: chr12:7131848-7131708 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 83, 68

Conread position: 1-189
Cow position: chr12:17472475-17472288 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 135
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 160, 96

Conread position: 1-198
Cow position: chr12:35807421-35807632 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 166
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 34, 103

Conread position: 1-213
Cow position: chr12:12939186-12938955 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 167
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 42, 0

Conread position: 1-215
Cow position: chr12:15622712-15622489 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 170
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 44, 190

Conread position: 1-216
Cow position: chr12:34103390-34103164 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 164
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 68, 156

Conread position: 1-219
Cow position: chr12:39753605-39753835 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 166
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 30, 130

Conread position: 1-224
Cow position: chr12:32399940-32400177 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 172
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 59, 32

Conread position: 1-227
Cow position: chr12:34089577-34089822 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 174
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 28, 0

Conread position: 1-235
Cow position: chr12:11583149-11583376 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 158
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 172, 19

Conread position: 1-237
Cow position: chr12:8710576-8710809 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 158
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 195, 68

Conread position: 1-238
Cow position: chr12:25561115-25561359 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 172
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 57, 121

Conread position: 1-239
Cow position: chr12:35707182-35706940 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 186
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 87, 97

Conread position: 1-240
Cow position: chr12:10028641-10028878 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 172
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 59, 122

Conread position: 1-264
Cow position: chr12:1487782-1488066 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 215
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 57, 82

Conread position: 1-264
Cow position: chr12:30437995-30438256 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 183
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 173, 46

Conread position: 1-270
Cow position: chr12:14523669-14523955 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 211
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 55, 194

Conread position: 1-275
Cow position: chr12:30170412-30170700 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 196
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 57, 128

Conread position: 1-275
Cow position: chr12:44622104-44622379 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 186
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 172, 50

Conread position: 1-277
Cow position: chr12:20312422-20312140 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 218
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 57, 99

Conread position: 1-279
Cow position: chr12:35718316-35718054 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 196
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 44, 114

Conread position: 1-279
Cow position: chr12:47800073-47799789 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 207
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 183, 119

Conread position: 1-280
Cow position: chr12:25312632-25312337 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 173

Conread position: 1-282
Cow position: chr12:48405875-48406143 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 206
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 57, 30

Conread position: 1-296
Cow position: chr12:24559098-24559410 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 112

Conread position: 1-296
Cow position: chr12:30596208-30596520 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 219
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 57, 123

Conread position: 1-300
Cow position: chr12:3757289-3756991 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 53

Conread position: 1-300
Cow position: chr12:8869138-8868826 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 221
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 29, 130

Conread position: 1-300
Cow position: chr12:8943475-8943168 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 206
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 57, 32

Conread position: 1-300
Cow position: chr12:12331756-12331454 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 212
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 52, 146

Conread position: 1-300
Cow position: chr12:16543824-16543524 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 217
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 32, 26

Conread position: 1-300
Cow position: chr12:18769329-18769015 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 1-300
Cow position: chr12:21828829-21829128 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 221
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 35, 29

Conread position: 1-300
Cow position: chr12:27039022-27038687 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 239
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 57, 30

Conread position: 1-300
Cow position: chr12:28559040-28559350 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 225
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 55, 127

Conread position: 1-300
Cow position: chr12:30688083-30688389 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 223
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 57, 95

Conread position: 1-303
Cow position: chr12:27055353-27055662 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 220
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 57, 14

Conread position: 1-363
Cow position: chr12:35354530-35354897 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 29

Conread position: 2-177
Cow position: chr12:26869053-26868870 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 131

Conread position: 2-184
Cow position: chr12:18417310-18417501 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 146
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 56, 13

Conread position: 2-241
Cow position: chr12:16851263-16851014 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 187
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 51, 133

Conread position: 2-262
Cow position: chr12:5146577-5146832 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 182
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 23, 32

Conread position: 2-279
Cow position: chr12:3212071-3212352 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 183

Conread position: 2-295
Cow position: chr12:30064690-30064986 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 174

Conread position: 2-297
Cow position: chr12:43104275-43104564 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 196
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 81, 98

Conread position: 2-299
Cow position: chr12:42966746-42967050 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 207
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 56, 95

Conread position: 2-300
Cow position: chr12:33457894-33458203 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 219
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 50, 7

Conread position: 2-363
Cow position: chr12:5797798-5797432 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 272
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 56, 91

Conread position: 2-363
Cow position: chr12:25619632-25619241 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 2-367
Cow position: chr12:245944-245574 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 33

Conread position: 3-184
Cow position: chr12:794297-794490 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 145
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 65, 0

Conread position: 3-239
Cow position: chr12:30805605-30805843 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 165
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 170, 118

Conread position: 3-270
Cow position: chr12:20326517-20326800 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 193
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 55, 129

Conread position: 3-275
Cow position: chr12:28582745-28582477 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 196
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 22, 31

Conread position: 3-279
Cow position: chr12:1223596-1223310 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 3-280
Cow position: chr12:1504773-1505056 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 203
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 23, 31

Conread position: 3-294
Cow position: chr12:38484651-38484344 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 260

Conread position: 4-364
Cow position: chr12:5899276-5899647 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 245
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 41

Conread position: 5-279
Cow position: chr12:27803301-27803015 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 198
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 52, 125

Conread position: 9-279
Cow position: chr12:41642187-41642467 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 198
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 11, 120

Conread position: 10-281
Cow position: chr12:45555667-45555389 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 188
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 48, 110

Conread position: 10-364
Cow position: chr12:41979548-41979197 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 252
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 48, 9

Conread position: 11-279
Cow position: chr12:44743244-44743528 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 187
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 11-300
Cow position: chr12:23379326-23379627 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 215
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 49, 200

Conread position: 12-229
Cow position: chr12:29770817-29770592 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 156
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 46, 110

Conread position: 13-214
Cow position: chr12:32987451-32987661 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 152
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 77, 0

Conread position: 14-244
Cow position: chr12:17881624-17881855 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 166
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 159, 151

Conread position: 16-300
Cow position: chr12:31198526-31198823 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 210
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 53, 80

Conread position: 18-261
Cow position: chr12:30476239-30476495 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 175
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 17, 12

Conread position: 28-187
Cow position: chr12:35984902-35985072 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 7, 0

Conread position: 31-222
Cow position: chr12:6117675-6117869 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 150
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 27, 101

Conread position: 32-279
Cow position: chr12:21862008-21861771 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 179
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 37, 146

Conread position: 32-297
Cow position: chr12:29842553-29842811 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 178
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 26, 39

Conread position: 33-234
Cow position: chr12:38454700-38454894 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 145
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 140, 8

Conread position: 34-245
Cow position: chr12:37394483-37394720 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 177
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 24, 0

Conread position: 37-261
Cow position: chr12:32221441-32221681 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 167
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 41-300
Cow position: chr12:27495799-27496057 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 179
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 91, 12

Conread position: 45-187
Cow position: chr12:11696464-11696614 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 120
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 13, 0

Conread position: 47-295
Cow position: chr12:1357630-1357388 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 173
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 149, 29

Conread position: 56-300
Cow position: chr12:32413315-32413571 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 183
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 95, 88

Conread position: 68-300
Cow position: chr12:3134677-3134451 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 171
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 44, 17

Conread position: 79-295
Cow position: chr12:27365753-27365978 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 161
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 94, 47

Conread position: 90-279
Cow position: chr12:14325435-14325236 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 41, 127

Conread position: 97-363
Cow position: chr12:22689591-22689870 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 200
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 48, 16

Conread position: 124-357
Cow position: chr12:39283117-39282888 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 167
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 13, 85

Conread position: 138-352
Cow position: chr12:7996298-7996537 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 180
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 42, 28

Conread position: 140-300
Cow position: chr12:24204423-24204258 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 17, 0

Conread position: 142-300
Cow position: chr12:31372333-31372491 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 37, 18

Conread position: 184-363
Cow position: chr12:5735458-5735272 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 97, 0

Show alignments to all cow chromosomes.