Cow genome map
| Conread name: | OvaN-UMC-pnatal4-008-h10 |
| Conread position: | 1-154 |
| Cow position: | chr13:11290618-11290774 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 33, 110 |
| Conread position: | 1-157 |
| Cow position: | chr13:37497554-37497706 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 1-164 |
| Cow position: | chr13:23444608-23444779 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 57, 41 |
| Conread position: | 1-172 |
| Cow position: | chr13:60429876-60430047 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 24, 33 |
| Conread position: | 1-180 |
| Cow position: | chr13:6894296-6894112 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 34, 29 |
| Conread position: | 1-180 |
| Cow position: | chr13:46985214-46985036 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 70, 57 |
| Conread position: | 1-185 |
| Cow position: | chr13:8607318-8607503 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 59, 8 |
| Conread position: | 1-187 |
| Cow position: | chr13:23816549-23816737 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 42, 138 |
| Conread position: | 1-190 |
| Cow position: | chr13:14227129-14226941 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 68, 126 |
| Conread position: | 1-208 |
| Cow position: | chr13:1766970-1766762 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 161 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 1-217 |
| Cow position: | chr13:14378189-14377954 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 1-228 |
| Cow position: | chr13:2774326-2774099 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 24, 33 |
| Conread position: | 1-239 |
| Cow position: | chr13:41253817-41253578 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 52, 14 |
| Conread position: | 1-239 |
| Cow position: | chr13:43762367-43762125 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 112, 125 |
| Conread position: | 1-243 |
| Cow position: | chr13:10658495-10658256 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 42, 158 |
| Conread position: | 1-254 |
| Cow position: | chr13:24539698-24539441 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 57, 185 |
| Conread position: | 1-259 |
| Cow position: | chr13:60487254-60487527 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 201 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 1-261 |
| Cow position: | chr13:25531586-25531859 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 57, 129 |
| Conread position: | 1-262 |
| Cow position: | chr13:4208612-4208884 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 205 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 57, 110 |
| Conread position: | 1-264 |
| Cow position: | chr13:20649781-20650058 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 186 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 106, 125 |
| Conread position: | 1-264 |
| Cow position: | chr13:20679547-20679267 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 79, 49 |
| Conread position: | 1-264 |
| Cow position: | chr13:25926994-25926718 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 57, 100 |
| Conread position: | 1-270 |
| Cow position: | chr13:47963999-47964259 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 57, 29 |
| Conread position: | 1-273 |
| Cow position: | chr13:21235483-21235753 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 68, 123 |
| Conread position: | 1-275 |
| Cow position: | chr13:8524420-8524702 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 198 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 29, 45 |
| Conread position: | 1-275 |
| Cow position: | chr13:9593709-9593421 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 192 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 42, 123 |
| Conread position: | 1-275 |
| Cow position: | chr13:18244058-18243778 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 197 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 122, 66 |
| Conread position: | 1-275 |
| Cow position: | chr13:26480012-26480288 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 29, 59 |
| Conread position: | 1-275 |
| Cow position: | chr13:32283329-32283044 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 57, 29 |
| Conread position: | 1-275 |
| Cow position: | chr13:46298439-46298705 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 195 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 38, 155 |
| Conread position: | 1-279 |
| Cow position: | chr13:9125875-9125583 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 219 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 57, 22 |
| Conread position: | 1-279 |
| Cow position: | chr13:15974812-15974530 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 24, 33 |
| Conread position: | 1-279 |
| Cow position: | chr13:20834655-20834932 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 57, 121 |
| Conread position: | 1-279 |
| Cow position: | chr13:31814069-31813788 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 29, 34 |
| Conread position: | 1-279 |
| Cow position: | chr13:35653890-35654178 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 88 |
| Conread position: | 1-279 |
| Cow position: | chr13:35659955-35659672 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 57, 184 |
| Conread position: | 1-279 |
| Cow position: | chr13:46284418-46284696 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 60 |
| Conread position: | 1-280 |
| Cow position: | chr13:9665277-9664970 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 220 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 1-280 |
| Cow position: | chr13:33631322-33631040 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 205 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 63, 100 |
| Conread position: | 1-282 |
| Cow position: | chr13:46636930-46637213 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 57, 30 |
| Conread position: | 1-295 |
| Cow position: | chr13:16327841-16327566 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 207 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 149, 37 |
| Conread position: | 1-296 |
| Cow position: | chr13:46458824-46458518 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 57, 100 |
| Conread position: | 1-298 |
| Cow position: | chr13:6759588-6759896 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 221 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 55, 11 |
| Conread position: | 1-299 |
| Cow position: | chr13:47502520-47502823 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 57, 196 |
| Conread position: | 1-300 |
| Cow position: | chr13:6079217-6079521 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 51, 120 |
| Conread position: | 1-300 |
| Cow position: | chr13:6621396-6621700 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 218 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 48, 102 |
| Conread position: | 1-300 |
| Cow position: | chr13:6945575-6945268 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 253 |
| Conread position: | 1-300 |
| Cow position: | chr13:10932754-10932442 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 223 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 57, 133 |
| Conread position: | 1-300 |
| Cow position: | chr13:11767840-11768153 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 138 |
| Conread position: | 1-300 |
| Cow position: | chr13:17347009-17346701 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 171 |
| Conread position: | 1-300 |
| Cow position: | chr13:17886703-17886409 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 57, 72 |
| Conread position: | 1-300 |
| Cow position: | chr13:22886790-22887098 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-300 |
| Cow position: | chr13:24280448-24280148 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 216 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 57, 119 |
| Conread position: | 1-300 |
| Cow position: | chr13:24754086-24753778 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 49, 128 |
| Conread position: | 1-300 |
| Cow position: | chr13:25434927-25435232 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 223 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 173, 69 |
| Conread position: | 1-300 |
| Cow position: | chr13:35718932-35719246 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 231 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 53, 136 |
| Conread position: | 1-301 |
| Cow position: | chr13:12233255-12233562 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 101, 84 |
| Conread position: | 1-355 |
| Cow position: | chr13:14717135-14717521 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 276 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 57, 29 |
| Conread position: | 1-355 |
| Cow position: | chr13:29814743-29814370 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 267 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 63, 27 |
| Conread position: | 1-355 |
| Cow position: | chr13:30510261-30509883 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 118 |
| Conread position: | 1-360 |
| Cow position: | chr13:46501506-46501134 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 268 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 57, 181 |
| Conread position: | 1-362 |
| Cow position: | chr13:32167103-32167501 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 1-363 |
| Cow position: | chr13:661430-661827 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 1-363 |
| Cow position: | chr13:7010671-7010285 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 279 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 57, 127 |
| Conread position: | 1-363 |
| Cow position: | chr13:18351042-18350664 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 44 |
| Conread position: | 1-363 |
| Cow position: | chr13:26383029-26383408 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 252 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 57, 190 |
| Conread position: | 1-363 |
| Cow position: | chr13:32717673-32718054 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 106 |
| Conread position: | 1-363 |
| Cow position: | chr13:54095008-54094619 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 277 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 172, 68 |
| Conread position: | 1-364 |
| Cow position: | chr13:1959211-1958816 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 272 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 52, 120 |
| Conread position: | 1-364 |
| Cow position: | chr13:33160814-33161185 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 270 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 177, 51 |
| Conread position: | 1-367 |
| Cow position: | chr13:14220671-14220304 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 268 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 195, 96 |
| Conread position: | 2-209 |
| Cow position: | chr13:24285763-24285550 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 56, 42 |
| Conread position: | 2-225 |
| Cow position: | chr13:4423279-4423518 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 177 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 56, 43 |
| Conread position: | 2-237 |
| Cow position: | chr13:6603010-6603247 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 168 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 43, 120 |
| Conread position: | 2-239 |
| Cow position: | chr13:1780034-1779786 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 33, 28 |
| Conread position: | 2-239 |
| Cow position: | chr13:21155288-21155537 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 33, 28 |
| Conread position: | 2-240 |
| Cow position: | chr13:55406464-55406702 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 164, 31 |
| Conread position: | 2-247 |
| Cow position: | chr13:12283039-12282786 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 56, 127 |
| Conread position: | 2-275 |
| Cow position: | chr13:48598105-48597825 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 105, 56 |
| Conread position: | 2-279 |
| Cow position: | chr13:25817714-25817439 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 195 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 171, 67 |
| Conread position: | 2-297 |
| Cow position: | chr13:23265930-23265627 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 120, 53 |
| Conread position: | 2-300 |
| Cow position: | chr13:4664661-4664966 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 56, 130 |
| Conread position: | 2-300 |
| Cow position: | chr13:20466091-20466394 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 217 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 169, 56 |
| Conread position: | 2-300 |
| Cow position: | chr13:60974279-60973970 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 96, 45 |
| Conread position: | 2-359 |
| Cow position: | chr13:21627683-21628067 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 265 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 120, 79 |
| Conread position: | 3-190 |
| Cow position: | chr13:2302638-2302832 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 55, 21 |
| Conread position: | 3-239 |
| Cow position: | chr13:21276055-21275816 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 55, 117 |
| Conread position: | 3-275 |
| Cow position: | chr13:45023008-45023293 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 22, 31 |
| Conread position: | 3-286 |
| Cow position: | chr13:17970834-17971125 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 110, 52 |
| Conread position: | 3-295 |
| Cow position: | chr13:3015968-3016277 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 56, 235 |
| Conread position: | 3-300 |
| Cow position: | chr13:33282214-33281897 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 223 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 3-300 |
| Cow position: | chr13:34995126-34995438 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 55, 116 |
| Conread position: | 3-303 |
| Cow position: | chr13:15945700-15945371 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 55, 323 |
| Conread position: | 3-355 |
| Cow position: | chr13:54080604-54080976 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 266 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 63, 158 |
| Conread position: | 3-357 |
| Cow position: | chr13:38898053-38898430 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 269 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 50, 119 |
| Conread position: | 3-363 |
| Cow position: | chr13:29631059-29630684 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 131 |
| Conread position: | 4-276 |
| Cow position: | chr13:47863501-47863787 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 29, 21 |
| Conread position: | 4-278 |
| Cow position: | chr13:38691341-38691617 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 210 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 54, 97 |
| Conread position: | 4-279 |
| Cow position: | chr13:55843682-55843398 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 54, 247 |
| Conread position: | 4-300 |
| Cow position: | chr13:12521575-12521887 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 154 |
| Conread position: | 4-300 |
| Cow position: | chr13:32657607-32657909 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 209 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 99, 29 |
| Conread position: | 5-300 |
| Cow position: | chr13:12207241-12206939 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 57, 125 |
| Conread position: | 5-363 |
| Cow position: | chr13:34761869-34761494 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 67 |
| Conread position: | 6-297 |
| Cow position: | chr13:13577833-13578140 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 226 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 54, 24 |
| Conread position: | 7-217 |
| Cow position: | chr13:24822571-24822779 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 51, 118 |
| Conread position: | 8-301 |
| Cow position: | chr13:49848113-49847814 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 20, 36 |
| Conread position: | 10-218 |
| Cow position: | chr13:50823360-50823568 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 48, 103 |
| Conread position: | 10-238 |
| Cow position: | chr13:4604488-4604249 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 48, 95 |
| Conread position: | 10-279 |
| Cow position: | chr13:11834288-11834566 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 94, 13 |
| Conread position: | 11-179 |
| Cow position: | chr13:22276974-22277150 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 47, 148 |
| Conread position: | 16-231 |
| Cow position: | chr13:41154849-41155069 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 24, 35 |
| Conread position: | 16-363 |
| Cow position: | chr13:9803254-9802878 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 345 |
| Conread position: | 18-172 |
| Cow position: | chr13:24767574-24767413 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 38, 115 |
| Conread position: | 18-300 |
| Cow position: | chr13:54969632-54969908 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 163, 23 |
| Conread position: | 20-225 |
| Cow position: | chr13:23586306-23586087 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 24-363 |
| Cow position: | chr13:46430122-46430484 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 35-264 |
| Cow position: | chr13:56673795-56674044 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 23, 98 |
| Conread position: | 35-300 |
| Cow position: | chr13:3796313-3796033 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 23, 261 |
| Conread position: | 40-300 |
| Cow position: | chr13:22075833-22075562 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 186 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 41-193 |
| Cow position: | chr13:39699961-39699815 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 41-358 |
| Cow position: | chr13:37558437-37558098 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 129, 56 |
| Conread position: | 43-297 |
| Cow position: | chr13:47188602-47188332 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 190 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 10, 30 |
| Conread position: | 44-357 |
| Cow position: | chr13:54864875-54865192 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 232 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 25, 84 |
| Conread position: | 51-275 |
| Cow position: | chr13:55674061-55674292 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 53, 58 |
| Conread position: | 54-269 |
| Cow position: | chr13:20057311-20057522 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 167 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 59, 26 |
| Conread position: | 56-279 |
| Cow position: | chr13:50739309-50739081 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 172 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 56-359 |
| Cow position: | chr13:20180560-20180229 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 239 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 57-300 |
| Cow position: | chr13:33975559-33975322 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 183 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 42, 79 |
| Conread position: | 65-276 |
| Cow position: | chr13:12745805-12745587 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 108, 55 |
| Conread position: | 67-300 |
| Cow position: | chr13:40464349-40464121 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 64, 47 |
| Conread position: | 68-243 |
| Cow position: | chr13:34191311-34191489 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 109, 46 |
| Conread position: | 73-323 |
| Cow position: | chr13:16952574-16952321 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 188, 53 |
| Conread position: | 74-239 |
| Cow position: | chr13:21563867-21563697 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 74-279 |
| Cow position: | chr13:57325976-57326188 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 102, 23 |
| Conread position: | 86-279 |
| Cow position: | chr13:48545231-48545417 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 15, 63 |
| Conread position: | 93-301 |
| Cow position: | chr13:43166926-43167141 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 29, 94 |
| Conread position: | 93-302 |
| Cow position: | chr13:43155755-43155965 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 39, 63 |
| Conread position: | 98-300 |
| Cow position: | chr13:49200739-49200527 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 26, 20 |
| Conread position: | 103-360 |
| Cow position: | chr13:54695819-54696085 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 202 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 83, 110 |
| Conread position: | 106-369 |
| Cow position: | chr13:18551089-18550805 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 215 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 26, 76 |
| Conread position: | 118-279 |
| Cow position: | chr13:54471093-54470925 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 63, 86 |
| Conread position: | 122-300 |
| Cow position: | chr13:35564375-35564203 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 126-279 |
| Cow position: | chr13:33954956-33955113 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 126-297 |
| Cow position: | chr13:13446086-13446261 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 110, 53 |
| Conread position: | 131-279 |
| Cow position: | chr13:6894105-6893950 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 147-363 |
| Cow position: | chr13:30271377-30271133 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 150-278 |
| Cow position: | chr13:52966923-52966788 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 26, 130 |
| Conread position: | 183-300 |
| Cow position: | chr13:14099103-14099220 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 93 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 85, 91 |
Show alignments to all cow chromosomes.