Cow genome map
| Conread name: | OvaN-UMC-pnatal4-008-h10 |
| Conread position: | 1-170 |
| Cow position: | chr26:7961436-7961604 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 1-183 |
| Cow position: | chr26:19769285-19769099 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 55, 122 |
| Conread position: | 1-207 |
| Cow position: | chr26:6323465-6323672 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 57, 127 |
| Conread position: | 1-207 |
| Cow position: | chr26:10814010-10814207 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 61, 74 |
| Conread position: | 1-219 |
| Cow position: | chr26:2246750-2246983 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 166 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 1-225 |
| Cow position: | chr26:8504058-8504292 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 1-227 |
| Cow position: | chr26:28243819-28243590 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 112, 197 |
| Conread position: | 1-237 |
| Cow position: | chr26:16549780-16550027 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 57, 134 |
| Conread position: | 1-240 |
| Cow position: | chr26:25393830-25394080 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 41, 130 |
| Conread position: | 1-264 |
| Cow position: | chr26:26294388-26294122 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 184, 32 |
| Conread position: | 1-270 |
| Cow position: | chr26:8810932-8811208 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 63, 97 |
| Conread position: | 1-277 |
| Cow position: | chr26:17289006-17289288 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 205 |
| Conread position: | 1-279 |
| Cow position: | chr26:2408908-2408641 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 58, 27 |
| Conread position: | 1-279 |
| Cow position: | chr26:3756033-3756312 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 213 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 57, 125 |
| Conread position: | 1-279 |
| Cow position: | chr26:3921946-3921681 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 67, 91 |
| Conread position: | 1-279 |
| Cow position: | chr26:4748058-4747771 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 206 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 57, 189 |
| Conread position: | 1-279 |
| Cow position: | chr26:23272583-23272863 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 57, 196 |
| Conread position: | 1-280 |
| Cow position: | chr26:6475628-6475338 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 74, 123 |
| Conread position: | 1-282 |
| Cow position: | chr26:32898071-32897776 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 24, 33 |
| Conread position: | 1-297 |
| Cow position: | chr26:2610002-2609698 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 210 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 51, 95 |
| Conread position: | 1-299 |
| Cow position: | chr26:6827966-6828273 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 24, 33 |
| Conread position: | 1-300 |
| Cow position: | chr26:9064147-9064452 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 215 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 56, 72 |
| Conread position: | 1-300 |
| Cow position: | chr26:9632571-9632253 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 230 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 53, 111 |
| Conread position: | 1-300 |
| Cow position: | chr26:12668998-12669310 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 229 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 56, 141 |
| Conread position: | 1-300 |
| Cow position: | chr26:14080519-14080816 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 96 |
| Conread position: | 1-301 |
| Cow position: | chr26:2196791-2196481 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 38, 122 |
| Conread position: | 1-316 |
| Cow position: | chr26:17675930-17675624 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 217 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 52, 157 |
| Conread position: | 1-317 |
| Cow position: | chr26:2770039-2769715 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 40 |
| Conread position: | 1-322 |
| Cow position: | chr26:29353711-29353381 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 270 |
| Conread position: | 1-342 |
| Cow position: | chr26:21339625-21339953 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 235 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 51, 163 |
| Conread position: | 1-363 |
| Cow position: | chr26:9666607-9666224 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 233 |
| Conread position: | 1-364 |
| Cow position: | chr26:33212567-33212216 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 64, 158 |
| Conread position: | 2-208 |
| Cow position: | chr26:8277771-8277556 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 56, 105 |
| Conread position: | 2-277 |
| Cow position: | chr26:20129874-20129589 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 131 |
| Conread position: | 3-223 |
| Cow position: | chr26:2389250-2389024 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 55, 122 |
| Conread position: | 3-254 |
| Cow position: | chr26:16906156-16906409 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 186 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 54, 116 |
| Conread position: | 3-261 |
| Cow position: | chr26:33745715-33745988 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 207 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 50, 235 |
| Conread position: | 3-300 |
| Cow position: | chr26:15211617-15211914 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 211 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 112, 49 |
| Conread position: | 3-302 |
| Cow position: | chr26:7103234-7102933 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 186 |
| Conread position: | 4-279 |
| Cow position: | chr26:17204336-17204055 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 53, 33 |
| Conread position: | 4-300 |
| Cow position: | chr26:32866087-32865781 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 15, 97 |
| Conread position: | 4-301 |
| Cow position: | chr26:783131-782819 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 212 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 54, 38 |
| Conread position: | 5-300 |
| Cow position: | chr26:33227610-33227902 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 219 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 47, 179 |
| Conread position: | 7-294 |
| Cow position: | chr26:19110708-19111018 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 228 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 26, 20 |
| Conread position: | 8-295 |
| Cow position: | chr26:3019621-3019312 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 222 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 13-296 |
| Cow position: | chr26:16604102-16604393 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 215 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 45, 18 |
| Conread position: | 24-275 |
| Cow position: | chr26:22354237-22354499 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 34, 9 |
| Conread position: | 28-300 |
| Cow position: | chr26:30605536-30605256 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 30, 227 |
| Conread position: | 28-352 |
| Cow position: | chr26:14924311-14924663 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 259 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 30, 26 |
| Conread position: | 31-264 |
| Cow position: | chr26:10292427-10292672 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 154, 27 |
| Conread position: | 37-279 |
| Cow position: | chr26:19178456-19178691 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 14, 55 |
| Conread position: | 41-274 |
| Cow position: | chr26:22249633-22249392 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 69, 10 |
| Conread position: | 49-363 |
| Cow position: | chr26:27585626-27585964 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 19 |
| Conread position: | 56-279 |
| Cow position: | chr26:12519877-12520117 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 82, 70 |
| Conread position: | 71-355 |
| Cow position: | chr26:33194521-33194811 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 211 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 111, 38 |
| Conread position: | 74-300 |
| Cow position: | chr26:20445225-20445002 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 14, 125 |
| Conread position: | 75-306 |
| Cow position: | chr26:22975152-22975382 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 176, 68 |
| Conread position: | 80-277 |
| Cow position: | chr26:5171918-5171722 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 179, 101 |
| Conread position: | 96-274 |
| Cow position: | chr26:17155425-17155241 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 97-300 |
| Cow position: | chr26:18719154-18719364 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 79, 184 |
| Conread position: | 118-363 |
| Cow position: | chr26:29244320-29244587 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 61, 17 |
| Conread position: | 123-270 |
| Cow position: | chr26:12125119-12124973 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 143, 56 |
| Conread position: | 126-243 |
| Cow position: | chr26:6299065-6299189 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 126-355 |
| Cow position: | chr26:12216798-12217029 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 140, 56 |
| Conread position: | 136-300 |
| Cow position: | chr26:11568033-11567862 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 144-300 |
| Cow position: | chr26:7955798-7955962 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 30, 146 |
| Conread position: | 166-300 |
| Cow position: | chr26:19935380-19935251 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 125, 11 |
| Conread position: | 203-363 |
| Cow position: | chr26:21057424-21057265 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 122, 96 |
Show alignments to all cow chromosomes.