Cow genome map

Conread name: OvaN-UMC-pnatal4-008-h10

Conread position: 1-136
Cow position: chr28:25334809-25334951 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 52, 132

Conread position: 1-175
Cow position: chr28:34150742-34150561 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 138
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 42, 0

Conread position: 1-180
Cow position: chr28:6971551-6971379 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 172, 89

Conread position: 1-189
Cow position: chr28:2905369-2905552 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 33

Conread position: 1-192
Cow position: chr28:15688829-15689021 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 68, 181

Conread position: 1-202
Cow position: chr28:28590527-28590730 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 57, 143

Conread position: 1-204
Cow position: chr28:14649137-14649346 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 146
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 61, 111

Conread position: 1-238
Cow position: chr28:9851419-9851645 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 183
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 54, 0

Conread position: 1-238
Cow position: chr28:10744998-10745246 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 171
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 33

Conread position: 1-239
Cow position: chr28:28414457-28414703 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 173
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 57, 239

Conread position: 1-241
Cow position: chr28:30978070-30978307 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 176
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 186, 103

Conread position: 1-243
Cow position: chr28:31871958-31871714 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 177
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 55, 18

Conread position: 1-245
Cow position: chr28:30961711-30961947 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 179
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 184, 36

Conread position: 1-251
Cow position: chr28:8022322-8022070 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 173
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 57, 32

Conread position: 1-264
Cow position: chr28:7549274-7548996 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 193
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 34, 29

Conread position: 1-264
Cow position: chr28:8408528-8408796 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 185
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 172, 33

Conread position: 1-264
Cow position: chr28:14218687-14218415 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 192
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 38, 29

Conread position: 1-266
Cow position: chr28:25563865-25564149 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 211
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 57, 115

Conread position: 1-268
Cow position: chr28:16204544-16204268 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 193
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 57, 128

Conread position: 1-268
Cow position: chr28:18462824-18462546 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 203
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 52, 118

Conread position: 1-274
Cow position: chr28:13865634-13865915 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 201
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 51, 37

Conread position: 1-275
Cow position: chr28:9285589-9285303 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 201
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 57, 128

Conread position: 1-275
Cow position: chr28:11884734-11884447 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 192
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 33

Conread position: 1-275
Cow position: chr28:13176890-13176615 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 198
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 57, 110

Conread position: 1-275
Cow position: chr28:19026214-19025931 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 204
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 113, 31

Conread position: 1-275
Cow position: chr28:21380663-21380955 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 202
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 37, 29

Conread position: 1-275
Cow position: chr28:23007937-23007656 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 201
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 172, 51

Conread position: 1-275
Cow position: chr28:27218109-27218396 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 192
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 57, 133

Conread position: 1-276
Cow position: chr28:10642229-10641959 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 100

Conread position: 1-279
Cow position: chr28:1837779-1838063 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 195
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 57, 103

Conread position: 1-279
Cow position: chr28:11006965-11007278 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 225
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 57, 0

Conread position: 1-279
Cow position: chr28:16686821-16687104 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 209
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 57, 106

Conread position: 1-279
Cow position: chr28:23231278-23231003 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 203
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 57, 10

Conread position: 1-292
Cow position: chr28:13267570-13267881 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 206
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 55, 129

Conread position: 1-296
Cow position: chr28:25826082-25825771 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 220
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 49, 297

Conread position: 1-297
Cow position: chr28:13725950-13726259 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 209
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 57, 138

Conread position: 1-297
Cow position: chr28:20265177-20265497 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 218
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 56, 0

Conread position: 1-297
Cow position: chr28:34199308-34199012 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 208
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 171, 29

Conread position: 1-298
Cow position: chr28:6486382-6486691 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 214
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 43, 122

Conread position: 1-300
Cow position: chr28:4275042-4274745 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 218
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 131, 54

Conread position: 1-300
Cow position: chr28:12047111-12046814 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 215
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 188, 49

Conread position: 1-300
Cow position: chr28:13693539-13693848 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 29

Conread position: 1-300
Cow position: chr28:18934244-18934553 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 214
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 56, 111

Conread position: 1-300
Cow position: chr28:23793514-23793211 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 210
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 24, 33

Conread position: 1-301
Cow position: chr28:19133572-19133873 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 222
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 57, 163

Conread position: 1-301
Cow position: chr28:32300571-32300258 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 215
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 51, 99

Conread position: 1-302
Cow position: chr28:5931142-5931453 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 203
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 72, 118

Conread position: 1-312
Cow position: chr28:11786920-11786603 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 213
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 96, 121

Conread position: 1-316
Cow position: chr28:21873561-21873872 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 92

Conread position: 1-322
Cow position: chr28:21939984-21940306 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 214
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 57, 139

Conread position: 1-341
Cow position: chr28:29455868-29455512 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 129

Conread position: 1-346
Cow position: chr28:3769866-3769507 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 255
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 177, 46

Conread position: 1-358
Cow position: chr28:23621336-23621696 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 251
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 57, 118

Conread position: 2-238
Cow position: chr28:15498428-15498173 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 182
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 32, 0

Conread position: 2-240
Cow position: chr28:7607017-7607270 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 173
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 2-251
Cow position: chr28:29392792-29393058 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 184
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 56, 168

Conread position: 2-259
Cow position: chr28:12942170-12942435 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 197
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 153, 45

Conread position: 2-275
Cow position: chr28:5144733-5144447 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 191
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 20, 153

Conread position: 2-300
Cow position: chr28:18354529-18354235 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 202
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 105, 43

Conread position: 2-301
Cow position: chr28:15677685-15677985 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 213
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 38, 48

Conread position: 2-304
Cow position: chr28:17153569-17153856 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 209
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 28, 0

Conread position: 2-306
Cow position: chr28:13902169-13901869 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 207
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 54, 99

Conread position: 2-360
Cow position: chr28:9822184-9821799 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 275
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 73, 67

Conread position: 3-194
Cow position: chr28:30995068-30995263 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 55, 47

Conread position: 3-222
Cow position: chr28:2340322-2340553 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 166
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 54, 100

Conread position: 3-279
Cow position: chr28:11501101-11500806 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 219
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 58, 0

Conread position: 3-284
Cow position: chr28:11380252-11379958 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 204
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 55, 118

Conread position: 3-300
Cow position: chr28:15082134-15081823 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 212
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 52, 6

Conread position: 3-302
Cow position: chr28:5074714-5074408 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 204
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 170, 75

Conread position: 3-360
Cow position: chr28:31971960-31971612 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 250
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 140, 16

Conread position: 4-280
Cow position: chr28:4098637-4098909 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 206
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 12, 51

Conread position: 4-297
Cow position: chr28:9176962-9176659 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 222
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 53, 119

Conread position: 4-297
Cow position: chr28:10035192-10035482 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 212
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 54, 31

Conread position: 4-300
Cow position: chr28:14508574-14508270 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 210
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 78, 64

Conread position: 5-355
Cow position: chr28:17625344-17624999 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 252
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 28, 22

Conread position: 9-239
Cow position: chr28:4057783-4058015 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 169
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 49, 24

Conread position: 22-184
Cow position: chr28:14493350-14493516 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 36, 0

Conread position: 33-254
Cow position: chr28:23352394-23352627 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 9, 21

Conread position: 33-296
Cow position: chr28:2814679-2814414 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 199
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 25, 86

Conread position: 33-301
Cow position: chr28:21570010-21570289 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 205
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 20, 114

Conread position: 35-300
Cow position: chr28:17362763-17362503 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 193
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 23, 5

Conread position: 41-259
Cow position: chr28:26901237-26901016 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 156
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 135, 12

Conread position: 56-281
Cow position: chr28:15577413-15577182 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 167
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 123, 148

Conread position: 56-300
Cow position: chr28:6643429-6643184 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 175
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 129, 57

Conread position: 57-275
Cow position: chr28:25249203-25249428 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 158
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 105, 61

Conread position: 58-363
Cow position: chr28:33285263-33284929 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 238
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 120, 62

Conread position: 73-300
Cow position: chr28:13256012-13255776 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 171
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 7, 23

Conread position: 75-301
Cow position: chr28:4763741-4763978 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 171
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 96, 232

Conread position: 82-279
Cow position: chr28:27659804-27659613 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 87-301
Cow position: chr28:12998988-12999194 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 147
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 180, 62

Conread position: 97-363
Cow position: chr28:5406443-5406722 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 205
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 81, 8

Conread position: 102-305
Cow position: chr28:9237207-9237414 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 152
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 89, 176

Conread position: 126-360
Cow position: chr28:1202324-1202069 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 196
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 60, 40

Conread position: 127-357
Cow position: chr28:19253397-19253652 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 189
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 51, 223

Conread position: 128-300
Cow position: chr28:4406170-4406343 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 52, 30

Conread position: 140-300
Cow position: chr28:31166055-31165884 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 46, 145

Conread position: 144-359
Cow position: chr28:11200935-11200713 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 137, 46

Show alignments to all cow chromosomes.