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Cow genome map

           
Conread name:
           
OvaN-UMC-pnatal4-008-h10
        

               
Conread position:
               
1-151
               

               
Cow position:
               
chr4:48283868-48284020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
51, 30
               

               
Conread position:
               
1-171
               

               
Cow position:
               
chr4:7571185-7571358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
42, 101
               

               
Conread position:
               
1-172
               

               
Cow position:
               
chr4:18489614-18489435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr4:14159348-14159162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
102, 182
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr4:61399654-61399478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
57, 98
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr4:18577000-18576800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
24, 33
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr4:19463266-19463462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
11, 30
               

               
Conread position:
               
1-193
               

               
Cow position:
               
chr4:2141521-2141717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
57, 124
               

               
Conread position:
               
1-193
               

               
Cow position:
               
chr4:46083119-46082920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
18, 134
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr4:24415063-24415259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
51, 147
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr4:45114830-45114599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr4:43495677-43495906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
57, 123
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr4:47773857-47773629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
60, 113
               

               
Conread position:
               
1-229
               

               
Cow position:
               
chr4:21392029-21391801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
172, 29
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr4:66547977-66547749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
172, 32
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr4:46861816-46861584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
49, 70
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr4:6792217-6792460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
181, 142
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr4:9912506-9912752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
23, 14
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr4:24187842-24187587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr4:32260071-32259821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
27, 53
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr4:27561172-27561422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr4:58512788-58512536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr4:12560812-12561057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
172, 51
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr4:58948136-58947879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
42, 18
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr4:32725998-32726271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
57, 128
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr4:15623616-15623900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
29, 155
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr4:16339817-16339554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
57, 100
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr4:243001-243282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
57, 123
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr4:13255869-13256139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
57, 31
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr4:44496160-44496430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
177, 62
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr4:56590806-56591094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
37, 29
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr4:33395914-33395638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
182, 96
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr4:60897497-60897222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
68, 126
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr4:509122-508847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
70, 55
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr4:19316224-19315946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
57, 97
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr4:21233095-21232812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
41, 57
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr4:23509364-23509655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
34, 29
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr4:23853980-23854242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
34, 29
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr4:29291298-29291576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
57, 29
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr4:34641953-34641664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
56, 115
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr4:41301215-41300935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
63, 120
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr4:47348608-47348889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
113, 14
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr4:5797748-5798029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
57, 168
               

               
Conread position:
               
1-279
               

               
Cow position:
               
chr4:25906548-25906275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 145
               

               
Conread position:
               
1-279
               

               
Cow position:
               
chr4:26373893-26373608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
57, 187
               

               
Conread position:
               
1-279
               

               
Cow position:
               
chr4:47730638-47730924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
29, 34
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr4:6208244-6208528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
56, 72
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr4:36755526-36755807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
57, 107
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr4:45583352-45583056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
57, 138
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr4:48499622-48499885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
124, 52
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr4:32748972-32749269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
37, 93
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr4:45235084-45234802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
54, 31
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr4:2121620-2121320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
50, 132
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr4:18439797-18439488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
34, 29
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr4:23065992-23065699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
57, 109
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr4:12697423-12697721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
66, 81
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr4:12914025-12913722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
68, 76
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr4:21258992-21259296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 106
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr4:51408187-51407892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
174, 54
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr4:61271858-61271561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
59, 180
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr4:1495624-1495322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
113, 46
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr4:9845697-9846000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 79
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr4:22249670-22249363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 122
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr4:22528612-22528301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr4:27997461-27997774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
49, 29
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr4:31172446-31172758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 223
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr4:36813148-36813464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
57, 109
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr4:40823339-40823026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
68, 147
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr4:41867220-41867522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
57, 129
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr4:44665591-44665286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
57, 112
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr4:44782150-44782461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
49, 128
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr4:52225785-52226089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
63, 148
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr4:53752286-53752608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
61, 46
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr4:58833442-58833132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
183, 29
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr4:68795530-68795207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
52, 235
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr4:23382030-23381731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
29, 57
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr4:43866075-43865768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
95, 67
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr4:22115382-22115697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 290
               

               
Conread position:
               
1-355
               

               
Cow position:
               
chr4:28377874-28377515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 74
               

               
Conread position:
               
1-355
               

               
Cow position:
               
chr4:41602624-41603001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
57, 130
               

               
Conread position:
               
1-360
               

               
Cow position:
               
chr4:19307031-19307419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 271
               

               
Conread position:
               
1-360
               

               
Cow position:
               
chr4:65406586-65406212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 125
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr4:9547755-9548120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
25, 11
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr4:17379042-17378678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
185, 74
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr4:61624815-61624437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
57, 26
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr4:62411648-62412020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
51, 242
               

               
Conread position:
               
2-163
               

               
Cow position:
               
chr4:41777611-41777446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
2-239
               

               
Cow position:
               
chr4:28151305-28151542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
50, 77
               

               
Conread position:
               
2-239
               

               
Cow position:
               
chr4:63119454-63119218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
50, 28
               

               
Conread position:
               
2-240
               

               
Cow position:
               
chr4:38181459-38181705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
60, 117
               

               
Conread position:
               
2-240
               

               
Cow position:
               
chr4:53763341-53763103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
56, 99
               

               
Conread position:
               
2-246
               

               
Cow position:
               
chr4:2610013-2610258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
56, 17
               

               
Conread position:
               
2-262
               

               
Cow position:
               
chr4:37828058-37827801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
178, 36
               

               
Conread position:
               
2-264
               

               
Cow position:
               
chr4:12700571-12700291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
58, 143
               

               
Conread position:
               
2-264
               

               
Cow position:
               
chr4:30974113-30974383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
55, 127
               

               
Conread position:
               
2-264
               

               
Cow position:
               
chr4:51122834-51123109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
56, 38
               

               
Conread position:
               
2-264
               

               
Cow position:
               
chr4:58834629-58834353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
23, 32
               

               
Conread position:
               
2-279
               

               
Cow position:
               
chr4:45952597-45952320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
33, 28
               

               
Conread position:
               
2-293
               

               
Cow position:
               
chr4:44451307-44451597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
54, 84
               

               
Conread position:
               
2-300
               

               
Cow position:
               
chr4:26400733-26401042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
56, 124
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr4:10992426-10992115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 130
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr4:23494708-23495007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
67, 80
               

               
Conread position:
               
2-310
               

               
Cow position:
               
chr4:36945415-36945100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
60, 91
               

               
Conread position:
               
2-363
               

               
Cow position:
               
chr4:23311489-23311102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 203
               

               
Conread position:
               
2-363
               

               
Cow position:
               
chr4:54146698-54146308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 92
               

               
Conread position:
               
3-204
               

               
Cow position:
               
chr4:8650018-8650218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
54, 100
               

               
Conread position:
               
3-224
               

               
Cow position:
               
chr4:26541511-26541741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
15, 201
               

               
Conread position:
               
3-229
               

               
Cow position:
               
chr4:480229-479997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
64, 93
               

               
Conread position:
               
3-274
               

               
Cow position:
               
chr4:39231745-39231460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
55, 135
               

               
Conread position:
               
3-275
               

               
Cow position:
               
chr4:54190872-54191151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
171, 64
               

               
Conread position:
               
3-279
               

               
Cow position:
               
chr4:7213808-7213533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
36, 95
               

               
Conread position:
               
3-280
               

               
Cow position:
               
chr4:3440184-3440464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
59, 117
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr4:5554015-5553716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
55, 188
               

               
Conread position:
               
3-300
               

               
Cow position:
               
chr4:20279117-20279414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
57, 118
               

               
Conread position:
               
3-300
               

               
Cow position:
               
chr4:35869993-35870292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
50, 69
               

               
Conread position:
               
4-224
               

               
Cow position:
               
chr4:19582836-19582611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
60, 37
               

               
Conread position:
               
4-275
               

               
Cow position:
               
chr4:21064817-21065098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
54, 84
               

               
Conread position:
               
4-305
               

               
Cow position:
               
chr4:33030337-33030641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
174, 40
               

               
Conread position:
               
4-352
               

               
Cow position:
               
chr4:27372080-27371708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
161, 65
               

               
Conread position:
               
4-363
               

               
Cow position:
               
chr4:49001522-49001143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
4-369
               

               
Cow position:
               
chr4:8692381-8692030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
54, 96
               

               
Conread position:
               
5-358
               

               
Cow position:
               
chr4:21365185-21365565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
6-227
               

               
Cow position:
               
chr4:69509079-69509304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
52, 118
               

               
Conread position:
               
6-355
               

               
Cow position:
               
chr4:21073369-21072995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
7-300
               

               
Cow position:
               
chr4:35471118-35471404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
51, 93
               

               
Conread position:
               
10-360
               

               
Cow position:
               
chr4:30131143-30131500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
53, 45
               

               
Conread position:
               
11-239
               

               
Cow position:
               
chr4:29237367-29237148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
11-264
               

               
Cow position:
               
chr4:59833723-59833976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
46, 8
               

               
Conread position:
               
11-297
               

               
Cow position:
               
chr4:5189221-5188929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
47, 101
               

               
Conread position:
               
11-363
               

               
Cow position:
               
chr4:25972682-25973066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 91
               

               
Conread position:
               
12-279
               

               
Cow position:
               
chr4:40623309-40623036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
46, 89
               

               
Conread position:
               
12-300
               

               
Cow position:
               
chr4:58707401-58707094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
57, 82
               

               
Conread position:
               
12-363
               

               
Cow position:
               
chr4:39767132-39767517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
13-275
               

               
Cow position:
               
chr4:13941246-13941518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
25, 89
               

               
Conread position:
               
15-297
               

               
Cow position:
               
chr4:61171693-61171982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
44, 105
               

               
Conread position:
               
16-279
               

               
Cow position:
               
chr4:68634754-68635015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
7, 35
               

               
Conread position:
               
16-300
               

               
Cow position:
               
chr4:36929104-36929396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
42, 119
               

               
Conread position:
               
19-270
               

               
Cow position:
               
chr4:20090780-20090542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
247, 39
               

               
Conread position:
               
19-275
               

               
Cow position:
               
chr4:51768906-51769165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
39, 101
               

               
Conread position:
               
27-363
               

               
Cow position:
               
chr4:22741605-22741274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
151, 26
               

               
Conread position:
               
33-300
               

               
Cow position:
               
chr4:58858355-58858082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
23, 36
               

               
Conread position:
               
33-363
               

               
Cow position:
               
chr4:45918842-45919201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
20, 99
               

               
Conread position:
               
37-362
               

               
Cow position:
               
chr4:35791287-35790969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
7, 103
               

               
Conread position:
               
41-270
               

               
Cow position:
               
chr4:5999368-5999139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
138, 15
               

               
Conread position:
               
41-373
               

               
Cow position:
               
chr4:15784988-15784654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
49, 12
               

               
Conread position:
               
51-276
               

               
Cow position:
               
chr4:5580387-5580620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
48, 83
               

               
Conread position:
               
54-358
               

               
Cow position:
               
chr4:63784289-63783987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
26, 184
               

               
Conread position:
               
56-222
               

               
Cow position:
               
chr4:63418089-63417918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
120, 153
               

               
Conread position:
               
56-264
               

               
Cow position:
               
chr4:41154479-41154694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
56-277
               

               
Cow position:
               
chr4:23758639-23758866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
129, 172
               

               
Conread position:
               
56-362
               

               
Cow position:
               
chr4:50769931-50769599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 79
               

               
Conread position:
               
56-364
               

               
Cow position:
               
chr4:10837545-10837213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
114, 49
               

               
Conread position:
               
58-300
               

               
Cow position:
               
chr4:23166741-23166988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
45, 69
               

               
Conread position:
               
61-280
               

               
Cow position:
               
chr4:51605768-51605546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
125, 59
               

               
Conread position:
               
61-300
               

               
Cow position:
               
chr4:60783884-60784115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
71-279
               

               
Cow position:
               
chr4:58576502-58576302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
71-295
               

               
Cow position:
               
chr4:24497967-24497748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
75-220
               

               
Cow position:
               
chr4:45116207-45116055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
29, 52
               

               
Conread position:
               
75-300
               

               
Cow position:
               
chr4:37880786-37881021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
106, 22
               

               
Conread position:
               
78-363
               

               
Cow position:
               
chr4:12667483-12667205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
72, 98
               

               
Conread position:
               
97-293
               

               
Cow position:
               
chr4:30762-30559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
42, 107
               

               
Conread position:
               
97-300
               

               
Cow position:
               
chr4:5913472-5913260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
89, 29
               

               
Conread position:
               
97-300
               

               
Cow position:
               
chr4:50127740-50127933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
98-363
               

               
Cow position:
               
chr4:6166428-6166146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
79, 20
               

               
Conread position:
               
100-300
               

               
Cow position:
               
chr4:1374242-1374446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
78, 44
               

               
Conread position:
               
105-275
               

               
Cow position:
               
chr4:21250144-21249971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
57, 69
               

               
Conread position:
               
105-300
               

               
Cow position:
               
chr4:21862979-21862785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
136, 107
               

               
Conread position:
               
109-279
               

               
Cow position:
               
chr4:33667088-33667261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
69, 41
               

               
Conread position:
               
115-279
               

               
Cow position:
               
chr4:48283388-48283216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
115-316
               

               
Cow position:
               
chr4:40434011-40433802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
61, 194
               

               
Conread position:
               
127-279
               

               
Cow position:
               
chr4:19729194-19729039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
57, 84
               

               
Conread position:
               
130-254
               

               
Cow position:
               
chr4:22713801-22713669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
130-302
               

               
Cow position:
               
chr4:38877674-38877847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
33, 43
               

               
Conread position:
               
136-279
               

               
Cow position:
               
chr4:47244140-47243995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
137-276
               

               
Cow position:
               
chr4:5002678-5002824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
43, 0
               
Show alignments to all cow chromosomes.