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Cow genome map

           
Conread name:
           
OvaN-UMC-pnatal4-008-h10
        

               
Conread position:
               
1-183
               

               
Cow position:
               
chr5:39710645-39710836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
59, 137
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr5:27690250-27690063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
57, 122
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr5:34922026-34921840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
61, 125
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr5:43329884-43329692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr5:9430650-9430463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
52, 91
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr5:62027138-62026946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
24, 33
               

               
Conread position:
               
1-194
               

               
Cow position:
               
chr5:6986967-6987170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
57, 104
               

               
Conread position:
               
1-194
               

               
Cow position:
               
chr5:46294858-46294659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
52, 103
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr5:9083144-9083360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
57, 129
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr5:20974635-20974413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr5:41229521-41229741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
52, 148
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr5:51490945-51490722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
34, 14
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr5:37714096-37713851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr5:14314330-14314577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
57, 104
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr5:23535981-23536221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
33, 69
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr5:65588516-65588751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
215, 120
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr5:27154831-27155069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
29, 101
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr5:62172227-62172465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
24, 33
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr5:9234272-9234030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
57, 190
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr5:26099562-26099323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
57, 89
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr5:45940797-45940554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
175, 33
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr5:48224767-48224527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
42, 94
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr5:57736923-57737154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr5:34300735-34300979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
172, 31
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr5:71504934-71505188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
57, 129
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr5:26561962-26562222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
23, 31
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr5:26377858-26377602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
51, 100
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr5:49479154-49479398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
71, 42
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr5:6683539-6683288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr5:26595296-26595023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
57, 110
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr5:17631061-17630799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
56, 104
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr5:32140898-32140627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
57, 20
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr5:35209668-35209392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 113
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr5:54350552-54350278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
34, 29
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr5:51993688-51993952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
50, 58
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr5:15722246-15721987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
235, 29
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr5:9090215-9089934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
57, 128
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr5:27102979-27102705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
57, 68
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr5:34528370-34528637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
56, 120
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr5:48535616-48535890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
19, 96
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr5:56467509-56467784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
29, 71
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr5:72172832-72173120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
57, 151
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr5:22643409-22643137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
56, 121
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr5:23169010-23168731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
172, 51
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr5:24348920-24349202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
98, 121
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr5:29827862-29828142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
24, 33
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr5:32697004-32696728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
172, 29
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr5:46510058-46509770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
57, 119
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr5:50821597-50821878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
172, 29
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr5:52645267-52644985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
66, 127
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr5:64823504-64823235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
24, 33
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr5:72344333-72344054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
11, 93
               

               
Conread position:
               
1-279
               

               
Cow position:
               
chr5:504101-503830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
57, 89
               

               
Conread position:
               
1-279
               

               
Cow position:
               
chr5:6045096-6045395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
57, 128
               

               
Conread position:
               
1-279
               

               
Cow position:
               
chr5:12803304-12803609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
57, 231
               

               
Conread position:
               
1-279
               

               
Cow position:
               
chr5:17999686-17999397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
57, 132
               

               
Conread position:
               
1-279
               

               
Cow position:
               
chr5:19905469-19905184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
42, 195
               

               
Conread position:
               
1-279
               

               
Cow position:
               
chr5:22839663-22839375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
59, 29
               

               
Conread position:
               
1-279
               

               
Cow position:
               
chr5:26376378-26376643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
74, 52
               

               
Conread position:
               
1-279
               

               
Cow position:
               
chr5:30332753-30333049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
71, 24
               

               
Conread position:
               
1-279
               

               
Cow position:
               
chr5:48143982-48143690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
57, 212
               

               
Conread position:
               
1-281
               

               
Cow position:
               
chr5:50215750-50215460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
57, 32
               

               
Conread position:
               
1-281
               

               
Cow position:
               
chr5:57935305-57935006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
24, 139
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr5:31913150-31913449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr5:51502821-51503117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 72
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr5:22934648-22934341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 153
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr5:55989550-55989855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr5:37425551-37425860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
59, 72
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr5:46798061-46798360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
188, 15
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr5:51076835-51076528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
57, 100
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr5:59303460-59303164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
39, 52
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr5:28946250-28945942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
43, 62
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr5:1344050-1343735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 223
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr5:17027903-17028215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
66, 103
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr5:20779573-20779278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
172, 114
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr5:23366961-23366645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
57, 149
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr5:26046142-26046442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 176
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr5:26262865-26262559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
57, 29
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr5:31660832-31660537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
173, 64
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr5:34184028-34184343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
57, 97
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr5:35969351-35969652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
57, 115
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr5:41598893-41598592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
57, 13
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr5:48573952-48573656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
52, 73
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr5:64758955-64758647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
75, 29
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr5:68481032-68481342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
56, 222
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr5:69773380-69773665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
68, 160
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr5:6896318-6896007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
57, 72
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr5:14538841-14538560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
57, 29
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr5:32282139-32282453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
59, 309
               

               
Conread position:
               
1-304
               

               
Cow position:
               
chr5:41522987-41522684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
57, 90
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr5:14153952-14154273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr5:27615324-27615646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 255
               

               
Conread position:
               
1-318
               

               
Cow position:
               
chr5:25900061-25899739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
57, 80
               

               
Conread position:
               
1-355
               

               
Cow position:
               
chr5:27007704-27008088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
56, 113
               

               
Conread position:
               
1-358
               

               
Cow position:
               
chr5:50425669-50425291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
61, 179
               

               
Conread position:
               
1-360
               

               
Cow position:
               
chr5:13044602-13044213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
57, 231
               

               
Conread position:
               
1-362
               

               
Cow position:
               
chr5:40233943-40234312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 97
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr5:3649652-3649262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 44
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr5:4630936-4631298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
174, 108
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr5:23641183-23640817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
50, 183
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr5:28927784-28927402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
57, 133
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr5:39442102-39442498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr5:40388057-40387680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
173, 46
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr5:41604421-41604825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
2-202
               

               
Cow position:
               
chr5:29560218-29560423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
47, 149
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr5:65924889-65924638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
56, 32
               

               
Conread position:
               
2-244
               

               
Cow position:
               
chr5:50900715-50900957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
56, 39
               

               
Conread position:
               
2-268
               

               
Cow position:
               
chr5:57126822-57127101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
43, 73
               

               
Conread position:
               
2-273
               

               
Cow position:
               
chr5:30844920-30845202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
48, 126
               

               
Conread position:
               
2-275
               

               
Cow position:
               
chr5:30276501-30276785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
28, 129
               

               
Conread position:
               
2-279
               

               
Cow position:
               
chr5:17869516-17869787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
55, 99
               

               
Conread position:
               
2-287
               

               
Cow position:
               
chr5:12709695-12709990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
33, 28
               

               
Conread position:
               
2-295
               

               
Cow position:
               
chr5:61488303-61487997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
2-300
               

               
Cow position:
               
chr5:18104340-18104027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
57, 187
               

               
Conread position:
               
2-300
               

               
Cow position:
               
chr5:27419911-27419609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
62, 116
               

               
Conread position:
               
2-300
               

               
Cow position:
               
chr5:52000028-52000338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
39, 28
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr5:1688303-1687995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
57, 71
               

               
Conread position:
               
2-302
               

               
Cow position:
               
chr5:58144794-58144480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
56, 131
               

               
Conread position:
               
2-359
               

               
Cow position:
               
chr5:56385038-56385411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 15
               

               
Conread position:
               
2-360
               

               
Cow position:
               
chr5:41636682-41637061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 146
               

               
Conread position:
               
2-363
               

               
Cow position:
               
chr5:40711633-40711245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 89
               

               
Conread position:
               
3-187
               

               
Cow position:
               
chr5:56753536-56753725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
55, 179
               

               
Conread position:
               
3-239
               

               
Cow position:
               
chr5:42744604-42744840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
170, 27
               

               
Conread position:
               
3-265
               

               
Cow position:
               
chr5:13536967-13537223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
233, 114
               

               
Conread position:
               
3-271
               

               
Cow position:
               
chr5:9972906-9972653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
179, 94
               

               
Conread position:
               
3-298
               

               
Cow position:
               
chr5:61030418-61030101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
57, 180
               

               
Conread position:
               
3-364
               

               
Cow position:
               
chr5:18276289-18276680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
55, 169
               

               
Conread position:
               
4-192
               

               
Cow position:
               
chr5:1276664-1276461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
4-234
               

               
Cow position:
               
chr5:4797499-4797274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
48, 59
               

               
Conread position:
               
4-306
               

               
Cow position:
               
chr5:70582085-70581766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
54, 40
               

               
Conread position:
               
5-240
               

               
Cow position:
               
chr5:16893963-16893716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
30, 22
               

               
Conread position:
               
5-248
               

               
Cow position:
               
chr5:49362179-49361929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
45, 100
               

               
Conread position:
               
5-300
               

               
Cow position:
               
chr5:31561348-31561655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
54, 44
               

               
Conread position:
               
5-300
               

               
Cow position:
               
chr5:72042035-72042324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
59, 135
               

               
Conread position:
               
6-194
               

               
Cow position:
               
chr5:33467227-33467035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
8-279
               

               
Cow position:
               
chr5:36486301-36486592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
51, 213
               

               
Conread position:
               
8-279
               

               
Cow position:
               
chr5:64398822-64399107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
10-190
               

               
Cow position:
               
chr5:66281229-66281407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
48, 137
               

               
Conread position:
               
10-297
               

               
Cow position:
               
chr5:54111736-54112030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
48, 175
               

               
Conread position:
               
10-301
               

               
Cow position:
               
chr5:54089855-54090155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
25, 60
               

               
Conread position:
               
11-228
               

               
Cow position:
               
chr5:66831898-66831667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
11-264
               

               
Cow position:
               
chr5:55928761-55929027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
59, 106
               

               
Conread position:
               
11-307
               

               
Cow position:
               
chr5:39695468-39695778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
47, 112
               

               
Conread position:
               
17-279
               

               
Cow position:
               
chr5:43110387-43110649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
47, 168
               

               
Conread position:
               
24-264
               

               
Cow position:
               
chr5:39182075-39181833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
162, 118
               

               
Conread position:
               
25-316
               

               
Cow position:
               
chr5:73526209-73526500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
9, 14
               

               
Conread position:
               
27-320
               

               
Cow position:
               
chr5:34218422-34218130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
63, 7
               

               
Conread position:
               
31-205
               

               
Cow position:
               
chr5:10248534-10248715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
26, 90
               

               
Conread position:
               
32-275
               

               
Cow position:
               
chr5:34167800-34168055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
26, 52
               

               
Conread position:
               
33-275
               

               
Cow position:
               
chr5:16214528-16214782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
25, 57
               

               
Conread position:
               
33-300
               

               
Cow position:
               
chr5:7552578-7552295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
33-300
               

               
Cow position:
               
chr5:27411555-27411281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
25, 90
               

               
Conread position:
               
34-300
               

               
Cow position:
               
chr5:3752707-3752971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
50, 35
               

               
Conread position:
               
37-190
               

               
Cow position:
               
chr5:59356831-59356992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
37-279
               

               
Cow position:
               
chr5:33265602-33265369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
37-300
               

               
Cow position:
               
chr5:21535264-21534991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
154, 36
               

               
Conread position:
               
41-270
               

               
Cow position:
               
chr5:56317152-56317378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
131, 10
               

               
Conread position:
               
41-275
               

               
Cow position:
               
chr5:30950062-30949820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
72, 15
               

               
Conread position:
               
41-279
               

               
Cow position:
               
chr5:38629143-38629385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
135, 12
               

               
Conread position:
               
43-295
               

               
Cow position:
               
chr5:30978218-30978468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
118, 77
               

               
Conread position:
               
43-300
               

               
Cow position:
               
chr5:29844134-29844400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
130, 79
               

               
Conread position:
               
47-228
               

               
Cow position:
               
chr5:7921541-7921361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
155, 74
               

               
Conread position:
               
50-341
               

               
Cow position:
               
chr5:18553763-18554072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
21, 31
               

               
Conread position:
               
55-299
               

               
Cow position:
               
chr5:54768043-54767790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
43, 72
               

               
Conread position:
               
56-270
               

               
Cow position:
               
chr5:39874991-39875213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
68, 47
               

               
Conread position:
               
56-279
               

               
Cow position:
               
chr5:73556318-73556097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
132, 30
               

               
Conread position:
               
56-282
               

               
Cow position:
               
chr5:59449710-59449467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
56-300
               

               
Cow position:
               
chr5:44417483-44417242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
57, 21
               

               
Conread position:
               
56-300
               

               
Cow position:
               
chr5:62638775-62639024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
108, 66
               

               
Conread position:
               
56-362
               

               
Cow position:
               
chr5:58748634-58748969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
47, 287
               

               
Conread position:
               
56-363
               

               
Cow position:
               
chr5:48405306-48404994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
82, 14
               

               
Conread position:
               
57-297
               

               
Cow position:
               
chr5:34483666-34483416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
121, 46
               

               
Conread position:
               
58-300
               

               
Cow position:
               
chr5:63188454-63188207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
47, 29
               

               
Conread position:
               
63-276
               

               
Cow position:
               
chr5:36407033-36407247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
113, 184
               

               
Conread position:
               
75-300
               

               
Cow position:
               
chr5:4927680-4927446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
101, 181
               

               
Conread position:
               
84-300
               

               
Cow position:
               
chr5:17267998-17267772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
92, 18
               

               
Conread position:
               
97-300
               

               
Cow position:
               
chr5:49567339-49567544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
79, 53
               

               
Conread position:
               
102-276
               

               
Cow position:
               
chr5:57381454-57381637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
105-300
               

               
Cow position:
               
chr5:47681090-47680898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
128, 73
               

               
Conread position:
               
107-360
               

               
Cow position:
               
chr5:49945830-49946104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
79, 50
               

               
Conread position:
               
122-301
               

               
Cow position:
               
chr5:41945781-41945969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
50, 106
               

               
Conread position:
               
137-300
               

               
Cow position:
               
chr5:2267206-2267367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
138-360
               

               
Cow position:
               
chr5:67150062-67149819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
77, 51
               

               
Conread position:
               
140-368
               

               
Cow position:
               
chr5:34279650-34279401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
142-346
               

               
Cow position:
               
chr5:60646910-60647125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
45, 83
               

               
Conread position:
               
154-339
               

               
Cow position:
               
chr5:49656057-49655850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
211-363
               

               
Cow position:
               
chr5:4072906-4073059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
84, 67
               
Show alignments to all cow chromosomes.