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Cow genome map

           
Conread name:
           
OvaP-UMC-pputal2-003-f07
        

               
Conread position:
               
1-380
               

               
Cow position:
               
chr14:50140493-50140109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 39
               

               
Conread position:
               
1-391
               

               
Cow position:
               
chr14:44253373-44252989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
43, 82
               

               
Conread position:
               
1-396
               

               
Cow position:
               
chr14:23056081-23055680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 67
               

               
Conread position:
               
1-403
               

               
Cow position:
               
chr14:9875862-9875462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 41
               

               
Conread position:
               
1-404
               

               
Cow position:
               
chr14:39301899-39302292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
37, 74
               

               
Conread position:
               
1-418
               

               
Cow position:
               
chr14:41756734-41756309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
315, 15
               

               
Conread position:
               
1-443
               

               
Cow position:
               
chr14:10907202-10906742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 74
               

               
Conread position:
               
1-468
               

               
Cow position:
               
chr14:1727587-1728068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 67
               

               
Conread position:
               
1-509
               

               
Cow position:
               
chr14:18448529-18449046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 76
               

               
Conread position:
               
1-509
               

               
Cow position:
               
chr14:47974459-47973947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 58
               

               
Conread position:
               
1-510
               

               
Cow position:
               
chr14:10091035-10090519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 69
               

               
Conread position:
               
1-510
               

               
Cow position:
               
chr14:20069040-20069544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 73
               

               
Conread position:
               
1-510
               

               
Cow position:
               
chr14:25385409-25385925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 74
               

               
Conread position:
               
1-519
               

               
Cow position:
               
chr14:21018594-21018064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 73
               

               
Conread position:
               
1-548
               

               
Cow position:
               
chr14:13810440-13809867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 75
               

               
Conread position:
               
1-564
               

               
Cow position:
               
chr14:20600863-20600298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 74
               

               
Conread position:
               
1-598
               

               
Cow position:
               
chr14:41479182-41479783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 69
               

               
Conread position:
               
1-622
               

               
Cow position:
               
chr14:13582297-13582899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
266, 40
               

               
Conread position:
               
1-622
               

               
Cow position:
               
chr14:21964593-21963976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
644
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
266, 68
               

               
Conread position:
               
1-624
               

               
Cow position:
               
chr14:21201351-21201966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
641
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 70
               

               
Conread position:
               
1-624
               

               
Cow position:
               
chr14:48495672-48496293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
637
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 41
               

               
Conread position:
               
1-625
               

               
Cow position:
               
chr14:28378838-28378210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 68
               

               
Conread position:
               
1-628
               

               
Cow position:
               
chr14:43561607-43562245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
652
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 64
               

               
Conread position:
               
1-630
               

               
Cow position:
               
chr14:41471491-41472128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
645
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 173
               

               
Conread position:
               
1-631
               

               
Cow position:
               
chr14:12243911-12244535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
642
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
269, 68
               

               
Conread position:
               
1-631
               

               
Cow position:
               
chr14:30760685-30760063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
641
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 41
               

               
Conread position:
               
2-389
               

               
Cow position:
               
chr14:46735792-46735386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 67
               

               
Conread position:
               
2-423
               

               
Cow position:
               
chr14:10912507-10912918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 67
               

               
Conread position:
               
2-442
               

               
Cow position:
               
chr14:40346702-40347132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 67
               

               
Conread position:
               
2-480
               

               
Cow position:
               
chr14:33538452-33538945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 68
               

               
Conread position:
               
2-495
               

               
Cow position:
               
chr14:32574614-32574138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 68
               

               
Conread position:
               
2-504
               

               
Cow position:
               
chr14:28796144-28795639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 15
               

               
Conread position:
               
2-557
               

               
Cow position:
               
chr14:32371268-32371820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 67
               

               
Conread position:
               
2-568
               

               
Cow position:
               
chr14:37883440-37884007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 30
               

               
Conread position:
               
2-571
               

               
Cow position:
               
chr14:39617910-39618474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 67
               

               
Conread position:
               
2-573
               

               
Cow position:
               
chr14:28090499-28091059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 68
               

               
Conread position:
               
2-624
               

               
Cow position:
               
chr14:41132227-41132815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 68
               

               
Conread position:
               
2-626
               

               
Cow position:
               
chr14:35382060-35381441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
633
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 66
               

               
Conread position:
               
2-626
               

               
Cow position:
               
chr14:35420284-35420910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
642
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 67
               

               
Conread position:
               
2-627
               

               
Cow position:
               
chr14:6599476-6600101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 157
               

               
Conread position:
               
2-630
               

               
Cow position:
               
chr14:17756035-17755424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 67
               

               
Conread position:
               
2-631
               

               
Cow position:
               
chr14:1802648-1803272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
637
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 68
               

               
Conread position:
               
2-631
               

               
Cow position:
               
chr14:14621704-14622321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
644
               

               
Alignm identity:
               
466
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 63
               

               
Conread position:
               
2-631
               

               
Cow position:
               
chr14:28988166-28987536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
646
               

               
Alignm identity:
               
466
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
250, 69
               

               
Conread position:
               
2-631
               

               
Cow position:
               
chr14:44237224-44237880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
667
               

               
Alignm identity:
               
460
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 67
               

               
Conread position:
               
2-631
               

               
Cow position:
               
chr14:48492318-48492952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
657
               

               
Alignm identity:
               
449
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 28
               

               
Conread position:
               
3-392
               

               
Cow position:
               
chr14:8495620-8495231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 66
               

               
Conread position:
               
3-392
               

               
Cow position:
               
chr14:12613660-12614015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
210, 50
               

               
Conread position:
               
3-400
               

               
Cow position:
               
chr14:12483838-12484229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 50
               

               
Conread position:
               
3-429
               

               
Cow position:
               
chr14:6418835-6419260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 72
               

               
Conread position:
               
3-429
               

               
Cow position:
               
chr14:22381079-22381511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 66
               

               
Conread position:
               
3-468
               

               
Cow position:
               
chr14:49563190-49563658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 73
               

               
Conread position:
               
3-481
               

               
Cow position:
               
chr14:33462630-33462159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 66
               

               
Conread position:
               
3-481
               

               
Cow position:
               
chr14:47584174-47584667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 67
               

               
Conread position:
               
3-510
               

               
Cow position:
               
chr14:7647557-7648058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 72
               

               
Conread position:
               
3-511
               

               
Cow position:
               
chr14:41324965-41325487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 5
               

               
Conread position:
               
3-553
               

               
Cow position:
               
chr14:7960241-7959711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 72
               

               
Conread position:
               
3-568
               

               
Cow position:
               
chr14:45605572-45605007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 74
               

               
Conread position:
               
3-596
               

               
Cow position:
               
chr14:38921392-38920830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
338, 34
               

               
Conread position:
               
3-612
               

               
Cow position:
               
chr14:25682419-25681788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 18
               

               
Conread position:
               
3-627
               

               
Cow position:
               
chr14:20640146-20640778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
643
               

               
Alignm identity:
               
510
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 66
               

               
Conread position:
               
3-631
               

               
Cow position:
               
chr14:20666546-20667158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
643
               

               
Alignm identity:
               
475
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 169
               

               
Conread position:
               
3-631
               

               
Cow position:
               
chr14:26859273-26859890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
641
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
316, 54
               

               
Conread position:
               
3-631
               

               
Cow position:
               
chr14:34199358-34200012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
667
               

               
Alignm identity:
               
479
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 76
               

               
Conread position:
               
3-631
               

               
Cow position:
               
chr14:36167410-36166787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
457
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 66
               

               
Conread position:
               
3-631
               

               
Cow position:
               
chr14:40230163-40230788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
643
               

               
Alignm identity:
               
457
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 48
               

               
Conread position:
               
3-631
               

               
Cow position:
               
chr14:41749298-41749909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
637
               

               
Alignm identity:
               
487
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 48
               

               
Conread position:
               
3-631
               

               
Cow position:
               
chr14:43046622-43046023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
642
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 72
               

               
Conread position:
               
4-419
               

               
Cow position:
               
chr14:8754801-8754383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 112
               

               
Conread position:
               
4-443
               

               
Cow position:
               
chr14:27312912-27312451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 65
               

               
Conread position:
               
4-624
               

               
Cow position:
               
chr14:18940837-18941434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
628
               

               
Alignm identity:
               
442
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 67
               

               
Conread position:
               
5-396
               

               
Cow position:
               
chr14:25885974-25885584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 64
               

               
Conread position:
               
5-481
               

               
Cow position:
               
chr14:42596851-42596373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 66
               

               
Conread position:
               
5-510
               

               
Cow position:
               
chr14:39779219-39778713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 64
               

               
Conread position:
               
5-543
               

               
Cow position:
               
chr14:39774583-39775120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 64
               

               
Conread position:
               
5-622
               

               
Cow position:
               
chr14:27848672-27848035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
649
               

               
Alignm identity:
               
485
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 60
               

               
Conread position:
               
5-627
               

               
Cow position:
               
chr14:44557371-44557969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
634
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
255, 47
               

               
Conread position:
               
5-630
               

               
Cow position:
               
chr14:19189511-19188901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
637
               

               
Alignm identity:
               
457
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 64
               

               
Conread position:
               
5-631
               

               
Cow position:
               
chr14:26441853-26442499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
659
               

               
Alignm identity:
               
486
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 77
               

               
Conread position:
               
6-490
               

               
Cow position:
               
chr14:8784647-8784177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 63
               

               
Conread position:
               
6-514
               

               
Cow position:
               
chr14:35544044-35544547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 63
               

               
Conread position:
               
6-623
               

               
Cow position:
               
chr14:16237035-16237655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
637
               

               
Alignm identity:
               
457
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 62
               

               
Conread position:
               
7-456
               

               
Cow position:
               
chr14:26449222-26448762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 24
               

               
Conread position:
               
7-479
               

               
Cow position:
               
chr14:44741915-44742389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 62
               

               
Conread position:
               
7-509
               

               
Cow position:
               
chr14:39821643-39821128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 68
               

               
Conread position:
               
8-412
               

               
Cow position:
               
chr14:24992282-24991883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 61
               

               
Conread position:
               
8-616
               

               
Cow position:
               
chr14:25779571-25778954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
635
               

               
Alignm identity:
               
458
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 67
               

               
Conread position:
               
8-631
               

               
Cow position:
               
chr14:9020498-9019888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
643
               

               
Alignm identity:
               
448
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 67
               

               
Conread position:
               
9-510
               

               
Cow position:
               
chr14:41180252-41180753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 60
               

               
Conread position:
               
10-627
               

               
Cow position:
               
chr14:50588933-50589539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
649
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 66
               

               
Conread position:
               
11-495
               

               
Cow position:
               
chr14:106119-106591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 58
               

               
Conread position:
               
11-631
               

               
Cow position:
               
chr14:21358029-21357404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
644
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 58
               

               
Conread position:
               
15-413
               

               
Cow position:
               
chr14:50027670-50027276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 54
               

               
Conread position:
               
19-556
               

               
Cow position:
               
chr14:19862982-19863513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 57
               

               
Conread position:
               
20-568
               

               
Cow position:
               
chr14:34096138-34096658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 33
               

               
Conread position:
               
24-630
               

               
Cow position:
               
chr14:20009865-20010466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
617
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 45
               

               
Conread position:
               
24-631
               

               
Cow position:
               
chr14:22989488-22988882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
621
               

               
Alignm identity:
               
468
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 45
               

               
Conread position:
               
26-631
               

               
Cow position:
               
chr14:9029233-9029823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 8
               

               
Conread position:
               
34-631
               

               
Cow position:
               
chr14:28304339-28304940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 35
               

               
Conread position:
               
35-407
               

               
Cow position:
               
chr14:12249758-12250136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 34
               

               
Conread position:
               
45-545
               

               
Cow position:
               
chr14:27591516-27592026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 25
               

               
Conread position:
               
47-442
               

               
Cow position:
               
chr14:19222312-19221907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 24
               

               
Conread position:
               
47-442
               

               
Cow position:
               
chr14:36440333-36439950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 21
               

               
Conread position:
               
47-493
               

               
Cow position:
               
chr14:39807031-39807480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 22
               

               
Conread position:
               
47-535
               

               
Cow position:
               
chr14:39616480-39616957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
161, 22
               

               
Conread position:
               
47-598
               

               
Cow position:
               
chr14:19618328-19618872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 22
               

               
Conread position:
               
48-412
               

               
Cow position:
               
chr14:9538766-9539134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
127, 20
               

               
Conread position:
               
48-628
               

               
Cow position:
               
chr14:26432820-26433399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 22
               

               
Conread position:
               
52-631
               

               
Cow position:
               
chr14:6735445-6736021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 17
               

               
Conread position:
               
55-621
               

               
Cow position:
               
chr14:8102200-8101654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 14
               

               
Conread position:
               
55-627
               

               
Cow position:
               
chr14:41211292-41210715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 14
               

               
Conread position:
               
59-455
               

               
Cow position:
               
chr14:21285041-21284638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 10
               

               
Conread position:
               
60-624
               

               
Cow position:
               
chr14:31129970-31130523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 111
               

               
Conread position:
               
61-409
               

               
Cow position:
               
chr14:37624071-37624423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 8
               

               
Conread position:
               
62-495
               

               
Cow position:
               
chr14:43250001-43249564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 107
               

               
Conread position:
               
72-445
               

               
Cow position:
               
chr14:5366279-5365907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 98
               

               
Conread position:
               
74-623
               

               
Cow position:
               
chr14:42154557-42155112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 60
               

               
Conread position:
               
77-624
               

               
Cow position:
               
chr14:20016306-20016856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 68
               

               
Conread position:
               
92-476
               

               
Cow position:
               
chr14:27362434-27362035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 81
               

               
Conread position:
               
93-466
               

               
Cow position:
               
chr14:33828530-33828167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 60
               

               
Conread position:
               
94-627
               

               
Cow position:
               
chr14:42330737-42330197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 38
               

               
Conread position:
               
95-624
               

               
Cow position:
               
chr14:37103583-37103061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 74
               

               
Conread position:
               
96-495
               

               
Cow position:
               
chr14:8989211-8989600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 73
               

               
Conread position:
               
96-623
               

               
Cow position:
               
chr14:6554755-6555294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 73
               

               
Conread position:
               
96-624
               

               
Cow position:
               
chr14:36437101-36437635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 73
               

               
Conread position:
               
97-631
               

               
Cow position:
               
chr14:20712300-20712835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 72
               

               
Conread position:
               
99-495
               

               
Cow position:
               
chr14:20467733-20468119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 70
               

               
Conread position:
               
102-452
               

               
Cow position:
               
chr14:8964925-8964567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 76
               

               
Conread position:
               
107-481
               

               
Cow position:
               
chr14:26620989-26620600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
115, 17
               

               
Conread position:
               
110-541
               

               
Cow position:
               
chr14:34082790-34083230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 46
               

               
Conread position:
               
110-631
               

               
Cow position:
               
chr14:18308941-18309453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 59
               

               
Conread position:
               
111-493
               

               
Cow position:
               
chr14:6789740-6789362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
71, 132
               

               
Conread position:
               
113-624
               

               
Cow position:
               
chr14:48427442-48426926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 56
               

               
Conread position:
               
114-389
               

               
Cow position:
               
chr14:17013873-17013586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
101, 55
               

               
Conread position:
               
116-615
               

               
Cow position:
               
chr14:41809289-41809792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 53
               

               
Conread position:
               
116-627
               

               
Cow position:
               
chr14:39769860-39770370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 318
               

               
Conread position:
               
117-390
               

               
Cow position:
               
chr14:19633542-19633260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 52
               

               
Conread position:
               
122-559
               

               
Cow position:
               
chr14:40433278-40432843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 109
               

               
Conread position:
               
125-631
               

               
Cow position:
               
chr14:11507888-11508391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 45
               

               
Conread position:
               
129-624
               

               
Cow position:
               
chr14:7291141-7290653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 26
               

               
Conread position:
               
134-487
               

               
Cow position:
               
chr14:17238707-17238336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
72, 13
               

               
Conread position:
               
136-395
               

               
Cow position:
               
chr14:31888369-31888628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
74, 32
               

               
Conread position:
               
138-631
               

               
Cow position:
               
chr14:18345393-18345877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 18
               

               
Conread position:
               
143-558
               

               
Cow position:
               
chr14:44848051-44848451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
171, 23
               

               
Conread position:
               
144-627
               

               
Cow position:
               
chr14:14466143-14466609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 9
               

               
Conread position:
               
146-564
               

               
Cow position:
               
chr14:18657265-18657698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
39, 16
               

               
Conread position:
               
148-413
               

               
Cow position:
               
chr14:31479034-31479292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
22, 48
               

               
Conread position:
               
149-495
               

               
Cow position:
               
chr14:10702504-10702863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
72, 20
               

               
Conread position:
               
150-371
               

               
Cow position:
               
chr14:11641247-11641470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
60, 19
               

               
Conread position:
               
152-547
               

               
Cow position:
               
chr14:47027048-47027443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
18, 118
               

               
Conread position:
               
153-509
               

               
Cow position:
               
chr14:7582116-7582487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
56, 15
               

               
Conread position:
               
156-392
               

               
Cow position:
               
chr14:26880483-26880728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
66, 13
               

               
Conread position:
               
156-493
               

               
Cow position:
               
chr14:49086626-49086285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
105, 13
               

               
Conread position:
               
156-627
               

               
Cow position:
               
chr14:24237141-24236673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 14
               

               
Conread position:
               
157-630
               

               
Cow position:
               
chr14:8848570-8848126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 12
               

               
Conread position:
               
158-504
               

               
Cow position:
               
chr14:22967072-22966722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 11
               

               
Conread position:
               
159-567
               

               
Cow position:
               
chr14:49021584-49021987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 20
               

               
Conread position:
               
162-504
               

               
Cow position:
               
chr14:32581074-32581411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
165, 37
               

               
Conread position:
               
162-597
               

               
Cow position:
               
chr14:27305474-27305030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
59, 359
               

               
Conread position:
               
164-631
               

               
Cow position:
               
chr14:45052753-45052285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
51, 7
               

               
Conread position:
               
169-409
               

               
Cow position:
               
chr14:44878475-44878727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
41, 78
               

               
Conread position:
               
169-502
               

               
Cow position:
               
chr14:44860930-44861267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
42, 168
               

               
Conread position:
               
169-504
               

               
Cow position:
               
chr14:37678687-37679036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
51, 160
               

               
Conread position:
               
169-507
               

               
Cow position:
               
chr14:11614910-11615257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
37, 49
               

               
Conread position:
               
169-509
               

               
Cow position:
               
chr14:37334002-37333661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
53, 187
               

               
Conread position:
               
169-546
               

               
Cow position:
               
chr14:16834641-16834251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 359
               

               
Conread position:
               
169-568
               

               
Cow position:
               
chr14:44258228-44257831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
8, 82
               

               
Conread position:
               
169-581
               

               
Cow position:
               
chr14:33751822-33751436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 97
               

               
Conread position:
               
169-625
               

               
Cow position:
               
chr14:19851609-19852083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
32, 154
               

               
Conread position:
               
169-628
               

               
Cow position:
               
chr14:23712997-23712545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
41, 203
               

               
Conread position:
               
169-631
               

               
Cow position:
               
chr14:10078568-10078101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 39
               

               
Conread position:
               
170-442
               

               
Cow position:
               
chr14:14280727-14280440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
40, 69
               

               
Conread position:
               
170-496
               

               
Cow position:
               
chr14:47591611-47591938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
74, 30
               

               
Conread position:
               
170-509
               

               
Cow position:
               
chr14:33773743-33774085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
97, 48
               

               
Conread position:
               
170-510
               

               
Cow position:
               
chr14:12856906-12856561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
13, 163
               

               
Conread position:
               
170-510
               

               
Cow position:
               
chr14:23107636-23107284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
40, 105
               

               
Conread position:
               
170-510
               

               
Cow position:
               
chr14:48412565-48412921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
170-555
               

               
Cow position:
               
chr14:14187643-14187253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
40, 128
               

               
Conread position:
               
170-605
               

               
Cow position:
               
chr14:41128200-41127779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
97, 40
               

               
Conread position:
               
170-624
               

               
Cow position:
               
chr14:19850722-19851174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
41, 131
               

               
Conread position:
               
171-631
               

               
Cow position:
               
chr14:20932927-20932470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 249
               

               
Conread position:
               
172-382
               

               
Cow position:
               
chr14:8006030-8006238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
44, 52
               

               
Conread position:
               
172-511
               

               
Cow position:
               
chr14:3564581-3564244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 57
               

               
Conread position:
               
172-627
               

               
Cow position:
               
chr14:19593832-19594284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
38, 105
               

               
Conread position:
               
172-631
               

               
Cow position:
               
chr14:23682571-23682114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 127
               

               
Conread position:
               
172-631
               

               
Cow position:
               
chr14:33714380-33714827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 171
               

               
Conread position:
               
172-631
               

               
Cow position:
               
chr14:33791497-33791040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 233
               

               
Conread position:
               
172-631
               

               
Cow position:
               
chr14:39433956-39434407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 18
               

               
Conread position:
               
172-631
               

               
Cow position:
               
chr14:45677531-45677078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 154
               

               
Conread position:
               
173-443
               

               
Cow position:
               
chr14:35700738-35700452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
42, 181
               

               
Conread position:
               
173-541
               

               
Cow position:
               
chr14:35018449-35018819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 203
               

               
Conread position:
               
173-619
               

               
Cow position:
               
chr14:1645882-1646325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 21
               

               
Conread position:
               
173-631
               

               
Cow position:
               
chr14:5221980-5222438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
37, 147
               

               
Conread position:
               
174-388
               

               
Cow position:
               
chr14:46782089-46782309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
69, 104
               

               
Conread position:
               
174-395
               

               
Cow position:
               
chr14:23729421-23729649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
8, 156
               

               
Conread position:
               
174-496
               

               
Cow position:
               
chr14:30662293-30661969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
29, 233
               

               
Conread position:
               
174-504
               

               
Cow position:
               
chr14:31785279-31784932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
39, 34
               

               
Conread position:
               
174-568
               

               
Cow position:
               
chr14:26097382-26097786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
70, 185
               

               
Conread position:
               
177-392
               

               
Cow position:
               
chr14:15913251-15913469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
111, 29
               

               
Conread position:
               
177-409
               

               
Cow position:
               
chr14:35711877-35712117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
31, 170
               

               
Conread position:
               
177-631
               

               
Cow position:
               
chr14:24981760-24981300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 87
               

               
Conread position:
               
178-455
               

               
Cow position:
               
chr14:7482357-7482072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
32, 122
               

               
Conread position:
               
178-496
               

               
Cow position:
               
chr14:25231347-25231675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
37, 114
               

               
Conread position:
               
178-576
               

               
Cow position:
               
chr14:4991293-4990901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 63
               

               
Conread position:
               
178-627
               

               
Cow position:
               
chr14:5630465-5630019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 227
               

               
Conread position:
               
179-568
               

               
Cow position:
               
chr14:38337850-38338226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 75
               

               
Conread position:
               
179-631
               

               
Cow position:
               
chr14:8540915-8541360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 239
               

               
Conread position:
               
182-563
               

               
Cow position:
               
chr14:19129807-19129416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 26
               

               
Conread position:
               
185-385
               

               
Cow position:
               
chr14:19996613-19996402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
185-415
               

               
Cow position:
               
chr14:36151687-36151463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
76, 23
               

               
Conread position:
               
185-452
               

               
Cow position:
               
chr14:11819829-11820101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 233
               

               
Conread position:
               
185-576
               

               
Cow position:
               
chr14:37131953-37131559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 302
               

               
Conread position:
               
185-623
               

               
Cow position:
               
chr14:49929440-49929890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
25, 33
               

               
Conread position:
               
185-631
               

               
Cow position:
               
chr14:48740591-48741019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 63
               

               
Conread position:
               
186-631
               

               
Cow position:
               
chr14:3195145-3194720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
23, 166
               

               
Conread position:
               
187-624
               

               
Cow position:
               
chr14:24922399-24921952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 212
               

               
Conread position:
               
190-504
               

               
Cow position:
               
chr14:43036168-43035868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
20, 95
               

               
Conread position:
               
192-429
               

               
Cow position:
               
chr14:23464527-23464774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
18, 219
               

               
Conread position:
               
193-452
               

               
Cow position:
               
chr14:27988934-27988665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
70, 16
               

               
Conread position:
               
194-624
               

               
Cow position:
               
chr14:11810284-11810706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
16, 151
               

               
Conread position:
               
195-496
               

               
Cow position:
               
chr14:21690996-21691301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
149, 72
               

               
Conread position:
               
197-396
               

               
Cow position:
               
chr14:24786215-24786015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
79, 90
               

               
Conread position:
               
197-455
               

               
Cow position:
               
chr14:3437273-3437006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
13, 33
               

               
Conread position:
               
197-630
               

               
Cow position:
               
chr14:6541439-6541879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 68
               

               
Conread position:
               
199-493
               

               
Cow position:
               
chr14:6190657-6190952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
11, 155
               

               
Conread position:
               
199-510
               

               
Cow position:
               
chr14:34355421-34355749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
11, 55
               

               
Conread position:
               
199-538
               

               
Cow position:
               
chr14:37884130-37884475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
11, 99
               

               
Conread position:
               
200-624
               

               
Cow position:
               
chr14:3868151-3868577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
67, 178
               

               
Conread position:
               
201-547
               

               
Cow position:
               
chr14:17841008-17841363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
9, 321
               

               
Conread position:
               
201-618
               

               
Cow position:
               
chr14:32452535-32452111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
9, 326
               

               
Conread position:
               
202-552
               

               
Cow position:
               
chr14:24796145-24796511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 232
               

               
Conread position:
               
208-360
               

               
Cow position:
               
chr14:47036529-47036686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
61, 47
               

               
Conread position:
               
208-563
               

               
Cow position:
               
chr14:29632612-29632970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 161
               

               
Conread position:
               
209-623
               

               
Cow position:
               
chr14:39918493-39918881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 126
               

               
Conread position:
               
212-563
               

               
Cow position:
               
chr14:19372610-19372253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 312
               

               
Conread position:
               
218-478
               

               
Cow position:
               
chr14:14979442-14979715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
49, 179
               

               
Conread position:
               
219-509
               

               
Cow position:
               
chr14:33309249-33309541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
50, 92
               

               
Conread position:
               
220-631
               

               
Cow position:
               
chr14:13846245-13845841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 158
               

               
Conread position:
               
221-621
               

               
Cow position:
               
chr14:40165679-40165286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
39, 72
               

               
Conread position:
               
227-431
               

               
Cow position:
               
chr14:10721483-10721688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
115, 110
               

               
Conread position:
               
228-449
               

               
Cow position:
               
chr14:20483216-20483435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
39, 59
               

               
Conread position:
               
231-556
               

               
Cow position:
               
chr14:39037477-39037147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
89, 40
               

               
Conread position:
               
232-456
               

               
Cow position:
               
chr14:33643544-33643765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
85, 39
               

               
Conread position:
               
235-625
               

               
Cow position:
               
chr14:14417262-14417648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
84, 42
               

               
Conread position:
               
241-615
               

               
Cow position:
               
chr14:8945854-8946220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
78, 7
               

               
Conread position:
               
245-407
               

               
Cow position:
               
chr14:22952764-22952930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
22, 44
               

               
Conread position:
               
246-438
               

               
Cow position:
               
chr14:37435063-37435270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
21, 115
               

               
Conread position:
               
247-624
               

               
Cow position:
               
chr14:27338569-27338192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
72, 9
               

               
Conread position:
               
249-597
               

               
Cow position:
               
chr14:37447247-37447587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
71, 30
               

               
Conread position:
               
252-568
               

               
Cow position:
               
chr14:33830518-33830211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 152
               

               
Conread position:
               
253-631
               

               
Cow position:
               
chr14:20826698-20826338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 131
               

               
Conread position:
               
257-508
               

               
Cow position:
               
chr14:16489786-16490051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
259-466
               

               
Cow position:
               
chr14:6175794-6175589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
67, 32
               

               
Conread position:
               
259-553
               

               
Cow position:
               
chr14:16256980-16256683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 105
               

               
Conread position:
               
260-370
               

               
Cow position:
               
chr14:24839961-24840075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
260-394
               

               
Cow position:
               
chr14:15514229-15514092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
260-403
               

               
Cow position:
               
chr14:33337269-33337415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
63, 81
               

               
Conread position:
               
260-409
               

               
Cow position:
               
chr14:41654186-41654337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
80, 143
               

               
Conread position:
               
260-449
               

               
Cow position:
               
chr14:22459663-22459844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
128, 62
               

               
Conread position:
               
260-492
               

               
Cow position:
               
chr14:25362557-25362323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
82, 46
               

               
Conread position:
               
260-495
               

               
Cow position:
               
chr14:26190886-26191128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
58, 152
               

               
Conread position:
               
260-495
               

               
Cow position:
               
chr14:49411331-49411104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
59, 76
               

               
Conread position:
               
260-504
               

               
Cow position:
               
chr14:25378281-25378528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
81, 159
               

               
Conread position:
               
260-564
               

               
Cow position:
               
chr14:34984074-34983780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
81, 31
               

               
Conread position:
               
260-568
               

               
Cow position:
               
chr14:1977869-1978174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
170, 31
               

               
Conread position:
               
260-568
               

               
Cow position:
               
chr14:8750288-8749982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 162
               

               
Conread position:
               
260-586
               

               
Cow position:
               
chr14:16033220-16032905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
80, 23
               

               
Conread position:
               
260-599
               

               
Cow position:
               
chr14:2959723-2959399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
77, 16
               

               
Conread position:
               
260-621
               

               
Cow position:
               
chr14:24387661-24387308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
81, 147
               

               
Conread position:
               
260-624
               

               
Cow position:
               
chr14:12324638-12324260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
59, 360
               

               
Conread position:
               
260-624
               

               
Cow position:
               
chr14:12667942-12667583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
59, 16
               

               
Conread position:
               
260-624
               

               
Cow position:
               
chr14:47252012-47252379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
57, 45
               

               
Conread position:
               
260-625
               

               
Cow position:
               
chr14:14949000-14949361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
68, 14
               

               
Conread position:
               
260-626
               

               
Cow position:
               
chr14:2974882-2975234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
56, 86
               

               
Conread position:
               
260-626
               

               
Cow position:
               
chr14:11846711-11846349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
55, 133
               

               
Conread position:
               
260-627
               

               
Cow position:
               
chr14:25002246-25001883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
124, 23
               

               
Conread position:
               
260-630
               

               
Cow position:
               
chr14:14182556-14182199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
124, 26
               

               
Conread position:
               
260-630
               

               
Cow position:
               
chr14:28114973-28115343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 247
               

               
Conread position:
               
260-631
               

               
Cow position:
               
chr14:7480226-7479853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
60, 31
               

               
Conread position:
               
260-631
               

               
Cow position:
               
chr14:7800124-7799764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
55, 19
               

               
Conread position:
               
260-631
               

               
Cow position:
               
chr14:13042971-13042606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 133
               

               
Conread position:
               
260-631
               

               
Cow position:
               
chr14:15313767-15313405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
156, 58
               

               
Conread position:
               
260-631
               

               
Cow position:
               
chr14:15932091-15931720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
9, 39
               

               
Conread position:
               
260-631
               

               
Cow position:
               
chr14:20110510-20110875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 114
               

               
Conread position:
               
260-631
               

               
Cow position:
               
chr14:25986730-25986359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 156
               

               
Conread position:
               
260-631
               

               
Cow position:
               
chr14:27919524-27919888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
52, 119
               

               
Conread position:
               
260-631
               

               
Cow position:
               
chr14:30017077-30017451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
60, 131
               

               
Conread position:
               
260-631
               

               
Cow position:
               
chr14:48446950-48447318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
55, 139
               

               
Conread position:
               
261-493
               

               
Cow position:
               
chr14:26490531-26490764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
57, 44
               

               
Conread position:
               
261-510
               

               
Cow position:
               
chr14:20384774-20385024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
68, 24
               

               
Conread position:
               
261-624
               

               
Cow position:
               
chr14:11043281-11043640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 83
               

               
Conread position:
               
261-628
               

               
Cow position:
               
chr14:15997555-15997901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 79
               

               
Conread position:
               
261-631
               

               
Cow position:
               
chr14:47276490-47276854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
34, 132
               

               
Conread position:
               
262-410
               

               
Cow position:
               
chr14:34777369-34777515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
140, 71
               

               
Conread position:
               
262-628
               

               
Cow position:
               
chr14:7695458-7695114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
151, 40
               

               
Conread position:
               
262-628
               

               
Cow position:
               
chr14:16760607-16760249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 80
               

               
Conread position:
               
262-631
               

               
Cow position:
               
chr14:40474755-40474409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
168, 53
               

               
Conread position:
               
262-631
               

               
Cow position:
               
chr14:41966451-41966072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
79, 98
               

               
Conread position:
               
263-569
               

               
Cow position:
               
chr14:19394570-19394267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
63, 128
               

               
Conread position:
               
266-382
               

               
Cow position:
               
chr14:8936439-8936562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
266-494
               

               
Cow position:
               
chr14:50055605-50055375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
51, 132
               

               
Conread position:
               
267-455
               

               
Cow position:
               
chr14:35819406-35819597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
121, 77
               

               
Conread position:
               
267-559
               

               
Cow position:
               
chr14:12035613-12035329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
47, 25
               

               
Conread position:
               
268-626
               

               
Cow position:
               
chr14:36289595-36289939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
47, 93
               

               
Conread position:
               
269-619
               

               
Cow position:
               
chr14:26628318-26628667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
18, 78
               

               
Conread position:
               
269-631
               

               
Cow position:
               
chr14:12342615-12342995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
50, 23
               

               
Conread position:
               
271-631
               

               
Cow position:
               
chr14:8786349-8786690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
49, 128
               

               
Conread position:
               
274-624
               

               
Cow position:
               
chr14:8867363-8867707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
41, 125
               

               
Conread position:
               
274-627
               

               
Cow position:
               
chr14:36254508-36254838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 122
               

               
Conread position:
               
274-631
               

               
Cow position:
               
chr14:38747862-38747526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
44, 17
               

               
Conread position:
               
275-504
               

               
Cow position:
               
chr14:3162907-3162694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
140, 11
               

               
Conread position:
               
276-623
               

               
Cow position:
               
chr14:24608163-24607821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 195
               

               
Conread position:
               
276-630
               

               
Cow position:
               
chr14:4877034-4877379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 125
               

               
Conread position:
               
278-631
               

               
Cow position:
               
chr14:15492791-15492438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 236
               

               
Conread position:
               
279-625
               

               
Cow position:
               
chr14:12855610-12855939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
120, 39
               

               
Conread position:
               
282-631
               

               
Cow position:
               
chr14:16549813-16550147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 114
               

               
Conread position:
               
282-631
               

               
Cow position:
               
chr14:48838786-48838438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 135
               

               
Conread position:
               
285-626
               

               
Cow position:
               
chr14:21933153-21933493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 85
               

               
Conread position:
               
286-625
               

               
Cow position:
               
chr14:40329631-40329294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
32, 104
               

               
Conread position:
               
286-630
               

               
Cow position:
               
chr14:23080578-23080906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
55, 12
               

               
Conread position:
               
292-562
               

               
Cow position:
               
chr14:1859433-1859697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
26, 88
               

               
Conread position:
               
292-568
               

               
Cow position:
               
chr14:10630944-10631211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
26, 69
               

               
Conread position:
               
292-628
               

               
Cow position:
               
chr14:4202912-4203242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
23, 225
               

               
Conread position:
               
292-631
               

               
Cow position:
               
chr14:33456859-33457198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
30, 234
               

               
Conread position:
               
292-631
               

               
Cow position:
               
chr14:44084298-44084629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
49, 16
               

               
Conread position:
               
295-565
               

               
Cow position:
               
chr14:46654367-46654630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
46, 33
               

               
Conread position:
               
297-625
               

               
Cow position:
               
chr14:33341934-33341604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
21, 194
               

               
Conread position:
               
298-627
               

               
Cow position:
               
chr14:12511726-12512040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
30, 59
               

               
Conread position:
               
298-630
               

               
Cow position:
               
chr14:45045781-45045444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
23, 112
               

               
Conread position:
               
301-487
               

               
Cow position:
               
chr14:17831083-17830896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
57, 40
               

               
Conread position:
               
305-573
               

               
Cow position:
               
chr14:48773072-48772809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
36, 208
               

               
Conread position:
               
308-626
               

               
Cow position:
               
chr14:35503528-35503215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
34, 10
               

               
Conread position:
               
309-609
               

               
Cow position:
               
chr14:33300869-33300563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
33, 100
               

               
Conread position:
               
312-568
               

               
Cow position:
               
chr14:42437187-42436934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
10, 144
               

               
Conread position:
               
312-627
               

               
Cow position:
               
chr14:23424418-23424116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
29, 79
               

               
Conread position:
               
312-627
               

               
Cow position:
               
chr14:23443179-23442877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
29, 79
               

               
Conread position:
               
312-631
               

               
Cow position:
               
chr14:12954225-12954528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
36, 10
               

               
Conread position:
               
312-631
               

               
Cow position:
               
chr14:15503999-15504310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
91, 32
               

               
Conread position:
               
313-631
               

               
Cow position:
               
chr14:22941562-22941893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
28, 262
               

               
Conread position:
               
313-631
               

               
Cow position:
               
chr14:25903684-25903379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
47, 25
               

               
Conread position:
               
313-631
               

               
Cow position:
               
chr14:26654973-26655290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
20, 15
               

               
Conread position:
               
314-564
               

               
Cow position:
               
chr14:19951728-19951479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
27, 202
               

               
Conread position:
               
315-624
               

               
Cow position:
               
chr14:30757000-30756695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
25, 99
               

               
Conread position:
               
316-621
               

               
Cow position:
               
chr14:24527007-24527306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
100, 18
               

               
Conread position:
               
318-631
               

               
Cow position:
               
chr14:26222899-26222583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
23, 208
               

               
Conread position:
               
319-631
               

               
Cow position:
               
chr14:24945341-24945647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
80, 31
               

               
Conread position:
               
323-627
               

               
Cow position:
               
chr14:41302682-41302992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
14, 90
               

               
Conread position:
               
325-541
               

               
Cow position:
               
chr14:29698210-29698427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
16, 41
               

               
Conread position:
               
325-624
               

               
Cow position:
               
chr14:7036207-7036506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
16, 83
               

               
Conread position:
               
325-624
               

               
Cow position:
               
chr14:19360042-19359723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
16, 40
               

               
Conread position:
               
325-631
               

               
Cow position:
               
chr14:5025430-5025125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
16, 62
               

               
Conread position:
               
325-631
               

               
Cow position:
               
chr14:11056592-11056886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
16, 66
               

               
Conread position:
               
327-502
               

               
Cow position:
               
chr14:5633792-5633976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
327-631
               

               
Cow position:
               
chr14:27823578-27823279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
14, 6
               

               
Conread position:
               
334-631
               

               
Cow position:
               
chr14:12634750-12635030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
79, 58
               

               
Conread position:
               
339-630
               

               
Cow position:
               
chr14:1708525-1708811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
76, 39
               

               
Conread position:
               
339-631
               

               
Cow position:
               
chr14:11470017-11470303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
76, 93
               

               
Conread position:
               
339-631
               

               
Cow position:
               
chr14:28153614-28153898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
71, 62
               

               
Conread position:
               
340-631
               

               
Cow position:
               
chr14:16524606-16524316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
64, 13
               

               
Conread position:
               
340-631
               

               
Cow position:
               
chr14:47170221-47170503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
29, 106
               

               
Conread position:
               
343-631
               

               
Cow position:
               
chr14:19193601-19193309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
70, 54
               

               
Conread position:
               
346-610
               

               
Cow position:
               
chr14:40001853-40002111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
67, 27
               

               
Conread position:
               
346-628
               

               
Cow position:
               
chr14:2038690-2038946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
260, 41
               

               
Conread position:
               
346-631
               

               
Cow position:
               
chr14:4282383-4282663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
42, 68
               

               
Conread position:
               
346-631
               

               
Cow position:
               
chr14:12072825-12073109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
31, 51
               

               
Conread position:
               
349-631
               

               
Cow position:
               
chr14:1796312-1796044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
38, 99
               

               
Conread position:
               
349-631
               

               
Cow position:
               
chr14:36442895-36443170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
66, 59
               

               
Conread position:
               
350-627
               

               
Cow position:
               
chr14:10693138-10693406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
354-631
               

               
Cow position:
               
chr14:29965134-29964864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
354-631
               

               
Cow position:
               
chr14:41486143-41486422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
54, 116
               

               
Conread position:
               
355-624
               

               
Cow position:
               
chr14:4047866-4047600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
61, 164
               

               
Conread position:
               
356-627
               

               
Cow position:
               
chr14:49807284-49807025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
32, 116
               

               
Conread position:
               
360-499
               

               
Cow position:
               
chr14:42480108-42480245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
362-623
               

               
Cow position:
               
chr14:21224749-21224498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
32, 38
               

               
Conread position:
               
362-630
               

               
Cow position:
               
chr14:25225840-25225580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
41, 154
               

               
Conread position:
               
363-564
               

               
Cow position:
               
chr14:2345177-2344977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
52, 148
               

               
Conread position:
               
363-631
               

               
Cow position:
               
chr14:7636387-7636652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
52, 42
               

               
Conread position:
               
364-627
               

               
Cow position:
               
chr14:25228245-25227998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
366-631
               

               
Cow position:
               
chr14:8688404-8688668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
113, 25
               

               
Conread position:
               
366-631
               

               
Cow position:
               
chr14:44713521-44713263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
368-623
               

               
Cow position:
               
chr14:41837769-41838004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
24, 47
               

               
Conread position:
               
368-626
               

               
Cow position:
               
chr14:27998938-27999187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
65, 27
               

               
Conread position:
               
368-631
               

               
Cow position:
               
chr14:11643153-11643399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
47, 11
               

               
Conread position:
               
372-559
               

               
Cow position:
               
chr14:19487387-19487213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
373-624
               

               
Cow position:
               
chr14:33546256-33546505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
36, 28
               

               
Conread position:
               
373-631
               

               
Cow position:
               
chr14:7198600-7198342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
15, 138
               

               
Conread position:
               
377-627
               

               
Cow position:
               
chr14:45576998-45577265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
11, 25
               

               
Conread position:
               
383-630
               

               
Cow position:
               
chr14:10852120-10851875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
19, 11
               

               
Conread position:
               
386-631
               

               
Cow position:
               
chr14:27733686-27733455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
10, 21
               

               
Conread position:
               
389-631
               

               
Cow position:
               
chr14:28924249-28924012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
166, 16
               

               
Conread position:
               
393-630
               

               
Cow position:
               
chr14:20467008-20466784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
395-624
               

               
Cow position:
               
chr14:13731020-13731243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
17, 120
               

               
Conread position:
               
395-631
               

               
Cow position:
               
chr14:4848424-4848197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
20, 10
               

               
Conread position:
               
395-631
               

               
Cow position:
               
chr14:43868387-43868153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
20, 96
               

               
Conread position:
               
397-625
               

               
Cow position:
               
chr14:34775669-34775896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
10, 113
               

               
Conread position:
               
399-559
               

               
Cow position:
               
chr14:20349659-20349814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
113, 14
               

               
Conread position:
               
400-631
               

               
Cow position:
               
chr14:12033168-12033398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
15, 80
               

               
Conread position:
               
401-630
               

               
Cow position:
               
chr14:10706944-10706726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
401-631
               

               
Cow position:
               
chr14:20984410-20984183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
15, 119
               

               
Conread position:
               
402-619
               

               
Cow position:
               
chr14:24712555-24712773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
130, 113
               

               
Conread position:
               
413-631
               

               
Cow position:
               
chr14:15469924-15470139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
158, 56
               

               
Conread position:
               
414-627
               

               
Cow position:
               
chr14:29734307-29734509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
414-630
               

               
Cow position:
               
chr14:18302018-18301804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
124, 190
               

               
Conread position:
               
414-630
               

               
Cow position:
               
chr14:35372152-35372364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
414-631
               

               
Cow position:
               
chr14:11577125-11576916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
414-631
               

               
Cow position:
               
chr14:11729053-11729260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
144, 97
               

               
Conread position:
               
427-631
               

               
Cow position:
               
chr14:21556982-21557178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
103, 80
               

               
Conread position:
               
432-631
               

               
Cow position:
               
chr14:24785697-24785506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
437-624
               

               
Cow position:
               
chr14:18412557-18412740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
438-627
               

               
Cow position:
               
chr14:20736644-20736465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
440-631
               

               
Cow position:
               
chr14:21530045-21530236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
168, 28
               

               
Conread position:
               
452-623
               

               
Cow position:
               
chr14:11280094-11280258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
456-631
               

               
Cow position:
               
chr14:32784100-32784271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
473-627
               

               
Cow position:
               
chr14:24746464-24746307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
58, 38
               
Show alignments to all cow chromosomes.