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Cow genome map

           
Conread name:
           
OvaP-UMC-pputal2-003-f07
        

               
Conread position:
               
1-396
               

               
Cow position:
               
chr15:39363496-39363891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
1-405
               

               
Cow position:
               
chr15:29272728-29272302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 75
               

               
Conread position:
               
1-408
               

               
Cow position:
               
chr15:5567799-5568218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 67
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr15:33681185-33680760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 24
               

               
Conread position:
               
1-419
               

               
Cow position:
               
chr15:30809738-30810157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 67
               

               
Conread position:
               
1-423
               

               
Cow position:
               
chr15:44256987-44256572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 69
               

               
Conread position:
               
1-445
               

               
Cow position:
               
chr15:1831095-1830634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 73
               

               
Conread position:
               
1-487
               

               
Cow position:
               
chr15:30985274-30985746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 68
               

               
Conread position:
               
1-493
               

               
Cow position:
               
chr15:24976663-24977150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 172
               

               
Conread position:
               
1-495
               

               
Cow position:
               
chr15:52764208-52764706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 67
               

               
Conread position:
               
1-504
               

               
Cow position:
               
chr15:27862810-27863312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
248, 41
               

               
Conread position:
               
1-508
               

               
Cow position:
               
chr15:17260641-17261155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 67
               

               
Conread position:
               
1-536
               

               
Cow position:
               
chr15:4374008-4373469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 78
               

               
Conread position:
               
1-580
               

               
Cow position:
               
chr15:33625496-33624897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 74
               

               
Conread position:
               
1-605
               

               
Cow position:
               
chr15:31949523-31948923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
621
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 67
               

               
Conread position:
               
1-624
               

               
Cow position:
               
chr15:4676481-4677097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 69
               

               
Conread position:
               
1-625
               

               
Cow position:
               
chr15:24617086-24616467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
633
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 68
               

               
Conread position:
               
1-626
               

               
Cow position:
               
chr15:20533927-20534554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 68
               

               
Conread position:
               
1-626
               

               
Cow position:
               
chr15:50957270-50957912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
650
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 68
               

               
Conread position:
               
1-631
               

               
Cow position:
               
chr15:10336270-10335627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
658
               

               
Alignm identity:
               
500
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
259, 61
               

               
Conread position:
               
1-631
               

               
Cow position:
               
chr15:20458779-20459417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
647
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 65
               

               
Conread position:
               
1-631
               

               
Cow position:
               
chr15:32741924-32742569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
654
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 67
               

               
Conread position:
               
1-631
               

               
Cow position:
               
chr15:35838548-35839203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
666
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 68
               

               
Conread position:
               
1-631
               

               
Cow position:
               
chr15:37382146-37381523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
650
               

               
Alignm identity:
               
449
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 69
               

               
Conread position:
               
1-631
               

               
Cow position:
               
chr15:40797907-40798524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
647
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 7
               

               
Conread position:
               
2-390
               

               
Cow position:
               
chr15:22168585-22168184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 67
               

               
Conread position:
               
2-413
               

               
Cow position:
               
chr15:9071899-9072329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 77
               

               
Conread position:
               
2-423
               

               
Cow position:
               
chr15:5498510-5498939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 67
               

               
Conread position:
               
2-483
               

               
Cow position:
               
chr15:52778013-52778492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 56
               

               
Conread position:
               
2-495
               

               
Cow position:
               
chr15:15881442-15880949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
259, 67
               

               
Conread position:
               
2-597
               

               
Cow position:
               
chr15:32226366-32226938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 68
               

               
Conread position:
               
2-612
               

               
Cow position:
               
chr15:21831902-21832527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
633
               

               
Alignm identity:
               
449
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 67
               

               
Conread position:
               
2-622
               

               
Cow position:
               
chr15:6970499-6969890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
634
               

               
Alignm identity:
               
458
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
258, 67
               

               
Conread position:
               
2-625
               

               
Cow position:
               
chr15:17233705-17233086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
636
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
265, 23
               

               
Conread position:
               
2-631
               

               
Cow position:
               
chr15:608677-608037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
650
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 67
               

               
Conread position:
               
2-631
               

               
Cow position:
               
chr15:6226673-6227282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
637
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 68
               

               
Conread position:
               
2-631
               

               
Cow position:
               
chr15:7430504-7429860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
658
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 67
               

               
Conread position:
               
2-631
               

               
Cow position:
               
chr15:16604352-16603723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
649
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 75
               

               
Conread position:
               
2-631
               

               
Cow position:
               
chr15:19403508-19402899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
647
               

               
Alignm identity:
               
457
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 80
               

               
Conread position:
               
2-631
               

               
Cow position:
               
chr15:21388650-21389300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
666
               

               
Alignm identity:
               
471
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 35
               

               
Conread position:
               
2-631
               

               
Cow position:
               
chr15:43030500-43031132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
652
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 67
               

               
Conread position:
               
2-631
               

               
Cow position:
               
chr15:47822307-47821727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
637
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 19
               

               
Conread position:
               
3-382
               

               
Cow position:
               
chr15:1128503-1128130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
258, 67
               

               
Conread position:
               
3-461
               

               
Cow position:
               
chr15:237255-236792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 171
               

               
Conread position:
               
3-496
               

               
Cow position:
               
chr15:24044571-24045078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 66
               

               
Conread position:
               
3-499
               

               
Cow position:
               
chr15:28039265-28038795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 65
               

               
Conread position:
               
3-504
               

               
Cow position:
               
chr15:5536274-5535773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 69
               

               
Conread position:
               
3-510
               

               
Cow position:
               
chr15:18018449-18017937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 72
               

               
Conread position:
               
3-624
               

               
Cow position:
               
chr15:4138651-4138035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
635
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
262, 66
               

               
Conread position:
               
3-624
               

               
Cow position:
               
chr15:26078847-26079445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
460
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 68
               

               
Conread position:
               
3-631
               

               
Cow position:
               
chr15:14871260-14870649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
648
               

               
Alignm identity:
               
494
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 56
               

               
Conread position:
               
3-631
               

               
Cow position:
               
chr15:16112928-16112288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
653
               

               
Alignm identity:
               
474
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 5
               

               
Conread position:
               
3-631
               

               
Cow position:
               
chr15:28924246-28924868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
646
               

               
Alignm identity:
               
461
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 66
               

               
Conread position:
               
4-623
               

               
Cow position:
               
chr15:4918540-4919168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
645
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 64
               

               
Conread position:
               
4-624
               

               
Cow position:
               
chr15:33285387-33284777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
637
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 49
               

               
Conread position:
               
4-630
               

               
Cow position:
               
chr15:11011061-11011698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
658
               

               
Alignm identity:
               
469
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 65
               

               
Conread position:
               
5-403
               

               
Cow position:
               
chr15:41583434-41583025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 71
               

               
Conread position:
               
5-404
               

               
Cow position:
               
chr15:23332345-23332762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 65
               

               
Conread position:
               
5-449
               

               
Cow position:
               
chr15:23703285-23702848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 144
               

               
Conread position:
               
5-452
               

               
Cow position:
               
chr15:15707600-15708048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 64
               

               
Conread position:
               
5-564
               

               
Cow position:
               
chr15:50302721-50302144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 65
               

               
Conread position:
               
5-627
               

               
Cow position:
               
chr15:1329587-1330211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
465
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 63
               

               
Conread position:
               
5-630
               

               
Cow position:
               
chr15:52611850-52611182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
672
               

               
Alignm identity:
               
469
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 64
               

               
Conread position:
               
5-631
               

               
Cow position:
               
chr15:1082868-1083476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
641
               

               
Alignm identity:
               
449
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
256, 65
               

               
Conread position:
               
5-631
               

               
Cow position:
               
chr15:25208248-25208865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
476
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 66
               

               
Conread position:
               
5-631
               

               
Cow position:
               
chr15:26911562-26912174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
636
               

               
Alignm identity:
               
461
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
260, 64
               

               
Conread position:
               
5-631
               

               
Cow position:
               
chr15:30047018-30047660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
648
               

               
Alignm identity:
               
478
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 38
               

               
Conread position:
               
5-631
               

               
Cow position:
               
chr15:36392181-36391565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
260, 63
               

               
Conread position:
               
6-373
               

               
Cow position:
               
chr15:53342470-53342843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 164
               

               
Conread position:
               
6-466
               

               
Cow position:
               
chr15:19119099-19119559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 63
               

               
Conread position:
               
6-567
               

               
Cow position:
               
chr15:34206683-34207232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 48
               

               
Conread position:
               
6-631
               

               
Cow position:
               
chr15:43827259-43827878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
636
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 28
               

               
Conread position:
               
7-480
               

               
Cow position:
               
chr15:9870898-9871376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 62
               

               
Conread position:
               
7-509
               

               
Cow position:
               
chr15:20352359-20351841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 65
               

               
Conread position:
               
7-564
               

               
Cow position:
               
chr15:20422246-20422821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 60
               

               
Conread position:
               
7-567
               

               
Cow position:
               
chr15:363530-362979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 61
               

               
Conread position:
               
7-631
               

               
Cow position:
               
chr15:794496-795123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
646
               

               
Alignm identity:
               
465
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 67
               

               
Conread position:
               
9-499
               

               
Cow position:
               
chr15:41360448-41360931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 37
               

               
Conread position:
               
10-507
               

               
Cow position:
               
chr15:6530324-6530837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 59
               

               
Conread position:
               
12-512
               

               
Cow position:
               
chr15:18720826-18720318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 57
               

               
Conread position:
               
14-631
               

               
Cow position:
               
chr15:10456490-10457134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
651
               

               
Alignm identity:
               
465
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 55
               

               
Conread position:
               
17-626
               

               
Cow position:
               
chr15:33306626-33306019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
458
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 167
               

               
Conread position:
               
18-624
               

               
Cow position:
               
chr15:24797297-24797902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 51
               

               
Conread position:
               
20-621
               

               
Cow position:
               
chr15:17196648-17196049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
615
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 46
               

               
Conread position:
               
23-623
               

               
Cow position:
               
chr15:20369965-20370550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 54
               

               
Conread position:
               
24-468
               

               
Cow position:
               
chr15:6331562-6331989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 41
               

               
Conread position:
               
24-624
               

               
Cow position:
               
chr15:22532733-22532154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
464
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 15
               

               
Conread position:
               
24-624
               

               
Cow position:
               
chr15:51822640-51822051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 10
               

               
Conread position:
               
25-631
               

               
Cow position:
               
chr15:45479507-45478893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 144
               

               
Conread position:
               
29-425
               

               
Cow position:
               
chr15:36423146-36422751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 142
               

               
Conread position:
               
29-623
               

               
Cow position:
               
chr15:8578633-8579235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 39
               

               
Conread position:
               
30-623
               

               
Cow position:
               
chr15:27123056-27123633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
607
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 39
               

               
Conread position:
               
31-418
               

               
Cow position:
               
chr15:32204421-32204801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
179, 34
               

               
Conread position:
               
33-569
               

               
Cow position:
               
chr15:42415757-42415209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 36
               

               
Conread position:
               
34-446
               

               
Cow position:
               
chr15:25110675-25111100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 136
               

               
Conread position:
               
44-495
               

               
Cow position:
               
chr15:47279675-47280116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 26
               

               
Conread position:
               
44-622
               

               
Cow position:
               
chr15:5571153-5571726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 25
               

               
Conread position:
               
44-624
               

               
Cow position:
               
chr15:32979551-32980133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 25
               

               
Conread position:
               
45-392
               

               
Cow position:
               
chr15:43248273-43248646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
7, 21
               

               
Conread position:
               
47-384
               

               
Cow position:
               
chr15:9062098-9062462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 23
               

               
Conread position:
               
47-392
               

               
Cow position:
               
chr15:22713367-22713704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
163, 22
               

               
Conread position:
               
47-412
               

               
Cow position:
               
chr15:20117583-20117216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
163, 23
               

               
Conread position:
               
47-509
               

               
Cow position:
               
chr15:26421125-26421588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 22
               

               
Conread position:
               
47-510
               

               
Cow position:
               
chr15:10570132-10570607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
76, 22
               

               
Conread position:
               
47-510
               

               
Cow position:
               
chr15:50177573-50177117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
135, 22
               

               
Conread position:
               
47-525
               

               
Cow position:
               
chr15:27732875-27732406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 22
               

               
Conread position:
               
47-631
               

               
Cow position:
               
chr15:46563001-46563583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
610
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 22
               

               
Conread position:
               
51-624
               

               
Cow position:
               
chr15:20472073-20472643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 18
               

               
Conread position:
               
53-386
               

               
Cow position:
               
chr15:34104737-34104402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 16
               

               
Conread position:
               
55-379
               

               
Cow position:
               
chr15:2587821-2587490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
122, 13
               

               
Conread position:
               
55-480
               

               
Cow position:
               
chr15:30820355-30820799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
113, 21
               

               
Conread position:
               
57-569
               

               
Cow position:
               
chr15:13554807-13554309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 81
               

               
Conread position:
               
57-631
               

               
Cow position:
               
chr15:23798055-23798628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 13
               

               
Conread position:
               
60-443
               

               
Cow position:
               
chr15:16936403-16936773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
260, 9
               

               
Conread position:
               
60-612
               

               
Cow position:
               
chr15:41323920-41323358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 8
               

               
Conread position:
               
60-622
               

               
Cow position:
               
chr15:4788497-4789064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 8
               

               
Conread position:
               
60-631
               

               
Cow position:
               
chr15:20390825-20391383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 109
               

               
Conread position:
               
70-631
               

               
Cow position:
               
chr15:47042171-47042749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 5
               

               
Conread position:
               
72-495
               

               
Cow position:
               
chr15:40546729-40547159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 97
               

               
Conread position:
               
72-510
               

               
Cow position:
               
chr15:49738594-49739026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 97
               

               
Conread position:
               
78-610
               

               
Cow position:
               
chr15:25584633-25585177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 100
               

               
Conread position:
               
78-624
               

               
Cow position:
               
chr15:16543017-16543537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 91
               

               
Conread position:
               
78-631
               

               
Cow position:
               
chr15:26896274-26896805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 87
               

               
Conread position:
               
78-631
               

               
Cow position:
               
chr15:43626905-43626358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 78
               

               
Conread position:
               
79-631
               

               
Cow position:
               
chr15:17869848-17870398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 90
               

               
Conread position:
               
81-624
               

               
Cow position:
               
chr15:47990320-47990865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 6
               

               
Conread position:
               
85-509
               

               
Cow position:
               
chr15:13387520-13387086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 21
               

               
Conread position:
               
87-630
               

               
Cow position:
               
chr15:22938907-22939429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 28
               

               
Conread position:
               
94-622
               

               
Cow position:
               
chr15:30982345-30981855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 75
               

               
Conread position:
               
95-631
               

               
Cow position:
               
chr15:3699854-3700391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 74
               

               
Conread position:
               
102-510
               

               
Cow position:
               
chr15:40999629-41000062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 67
               

               
Conread position:
               
104-509
               

               
Cow position:
               
chr15:16585940-16585521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
58, 66
               

               
Conread position:
               
108-509
               

               
Cow position:
               
chr15:27281279-27280877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 61
               

               
Conread position:
               
109-390
               

               
Cow position:
               
chr15:52380706-52380420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
179, 60
               

               
Conread position:
               
109-631
               

               
Cow position:
               
chr15:29026462-29026989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 60
               

               
Conread position:
               
113-540
               

               
Cow position:
               
chr15:9648323-9648725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
97, 43
               

               
Conread position:
               
114-420
               

               
Cow position:
               
chr15:19733773-19733456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
118, 55
               

               
Conread position:
               
114-510
               

               
Cow position:
               
chr15:13515780-13515374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 55
               

               
Conread position:
               
114-624
               

               
Cow position:
               
chr15:33662905-33662412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
96, 55
               

               
Conread position:
               
115-423
               

               
Cow position:
               
chr15:53680361-53680665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
95, 14
               

               
Conread position:
               
116-459
               

               
Cow position:
               
chr15:23486764-23487109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 53
               

               
Conread position:
               
118-370
               

               
Cow position:
               
chr15:19781941-19781692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
50, 70
               

               
Conread position:
               
118-631
               

               
Cow position:
               
chr15:17084616-17084100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 26
               

               
Conread position:
               
119-504
               

               
Cow position:
               
chr15:23180825-23180454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 22
               

               
Conread position:
               
119-624
               

               
Cow position:
               
chr15:8428411-8427913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 50
               

               
Conread position:
               
120-631
               

               
Cow position:
               
chr15:19186213-19186729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 43
               

               
Conread position:
               
125-487
               

               
Cow position:
               
chr15:8962397-8962041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 31
               

               
Conread position:
               
126-631
               

               
Cow position:
               
chr15:42788764-42789278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 42
               

               
Conread position:
               
129-623
               

               
Cow position:
               
chr15:5420508-5420980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 36
               

               
Conread position:
               
133-627
               

               
Cow position:
               
chr15:30316194-30316662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 80
               

               
Conread position:
               
135-428
               

               
Cow position:
               
chr15:28126659-28126955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
75, 34
               

               
Conread position:
               
137-624
               

               
Cow position:
               
chr15:24129035-24128564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
73, 32
               

               
Conread position:
               
141-631
               

               
Cow position:
               
chr15:21421326-21420841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
126, 117
               

               
Conread position:
               
142-612
               

               
Cow position:
               
chr15:38806116-38806592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 27
               

               
Conread position:
               
144-392
               

               
Cow position:
               
chr15:7827655-7827912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
18, 27
               

               
Conread position:
               
144-532
               

               
Cow position:
               
chr15:26404650-26404273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 25
               

               
Conread position:
               
147-495
               

               
Cow position:
               
chr15:40423271-40423606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
63, 22
               

               
Conread position:
               
147-555
               

               
Cow position:
               
chr15:16307794-16307390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 22
               

               
Conread position:
               
154-412
               

               
Cow position:
               
chr15:11362807-11363068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
16, 250
               

               
Conread position:
               
155-446
               

               
Cow position:
               
chr15:20725247-20725544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
55, 14
               

               
Conread position:
               
156-487
               

               
Cow position:
               
chr15:24941017-24941340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 14
               

               
Conread position:
               
156-612
               

               
Cow position:
               
chr15:31283737-31283295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
59, 13
               

               
Conread position:
               
156-631
               

               
Cow position:
               
chr15:30985912-30986392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 14
               

               
Conread position:
               
159-507
               

               
Cow position:
               
chr15:29340429-29340072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 10
               

               
Conread position:
               
159-627
               

               
Cow position:
               
chr15:36259225-36259699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 10
               

               
Conread position:
               
162-631
               

               
Cow position:
               
chr15:43913721-43914204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 7
               

               
Conread position:
               
163-631
               

               
Cow position:
               
chr15:51427460-51427932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 150
               

               
Conread position:
               
164-514
               

               
Cow position:
               
chr15:4093564-4093929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 5
               

               
Conread position:
               
166-581
               

               
Cow position:
               
chr15:51898584-51898169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
101, 42
               

               
Conread position:
               
168-568
               

               
Cow position:
               
chr15:36781974-36782373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 32
               

               
Conread position:
               
169-412
               

               
Cow position:
               
chr15:45217179-45216926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
23, 143
               

               
Conread position:
               
169-443
               

               
Cow position:
               
chr15:22886905-22886622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
38, 21
               

               
Conread position:
               
169-446
               

               
Cow position:
               
chr15:19813007-19812720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
40, 185
               

               
Conread position:
               
169-452
               

               
Cow position:
               
chr15:40009293-40009588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
169-493
               

               
Cow position:
               
chr15:40343607-40343269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
41, 122
               

               
Conread position:
               
169-502
               

               
Cow position:
               
chr15:20482480-20482831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
41, 276
               

               
Conread position:
               
169-508
               

               
Cow position:
               
chr15:9928713-9928369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
80, 39
               

               
Conread position:
               
169-509
               

               
Cow position:
               
chr15:6657462-6657108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
98, 55
               

               
Conread position:
               
169-624
               

               
Cow position:
               
chr15:16823293-16822851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 303
               

               
Conread position:
               
169-624
               

               
Cow position:
               
chr15:33303690-33303209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
41, 274
               

               
Conread position:
               
169-631
               

               
Cow position:
               
chr15:16927727-16928195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
79, 39
               

               
Conread position:
               
170-374
               

               
Cow position:
               
chr15:33679050-33678844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
97, 155
               

               
Conread position:
               
170-428
               

               
Cow position:
               
chr15:23791813-23791553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
40, 232
               

               
Conread position:
               
170-496
               

               
Cow position:
               
chr15:45323139-45322803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
97, 200
               

               
Conread position:
               
170-504
               

               
Cow position:
               
chr15:31616648-31616992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
40, 178
               

               
Conread position:
               
170-510
               

               
Cow position:
               
chr15:4535263-4534919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 50
               

               
Conread position:
               
170-510
               

               
Cow position:
               
chr15:23767909-23768249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 211
               

               
Conread position:
               
170-616
               

               
Cow position:
               
chr15:38883513-38883051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 311
               

               
Conread position:
               
170-627
               

               
Cow position:
               
chr15:40957935-40957476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 304
               

               
Conread position:
               
170-631
               

               
Cow position:
               
chr15:286814-286366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 91
               

               
Conread position:
               
170-631
               

               
Cow position:
               
chr15:14020827-14020391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
40, 223
               

               
Conread position:
               
170-631
               

               
Cow position:
               
chr15:17100360-17100810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 38
               

               
Conread position:
               
170-631
               

               
Cow position:
               
chr15:24994172-24994617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 24
               

               
Conread position:
               
171-624
               

               
Cow position:
               
chr15:16476386-16476850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 176
               

               
Conread position:
               
171-627
               

               
Cow position:
               
chr15:39599795-39599347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 234
               

               
Conread position:
               
172-508
               

               
Cow position:
               
chr15:37931415-37931749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
38, 115
               

               
Conread position:
               
172-618
               

               
Cow position:
               
chr15:2952776-2953226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 178
               

               
Conread position:
               
172-618
               

               
Cow position:
               
chr15:12785790-12785336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
43, 228
               

               
Conread position:
               
174-630
               

               
Cow position:
               
chr15:21894134-21893675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 301
               

               
Conread position:
               
175-631
               

               
Cow position:
               
chr15:50341459-50341012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
166, 33
               

               
Conread position:
               
177-630
               

               
Cow position:
               
chr15:5683483-5683032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
38, 108
               

               
Conread position:
               
177-631
               

               
Cow position:
               
chr15:26158270-26158705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 15
               

               
Conread position:
               
178-627
               

               
Cow position:
               
chr15:6462154-6462595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 94
               

               
Conread position:
               
178-631
               

               
Cow position:
               
chr15:11658217-11658689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 266
               

               
Conread position:
               
178-631
               

               
Cow position:
               
chr15:35642368-35641906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 228
               

               
Conread position:
               
180-509
               

               
Cow position:
               
chr15:21837035-21836692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
34, 259
               

               
Conread position:
               
180-531
               

               
Cow position:
               
chr15:50322942-50322582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 234
               

               
Conread position:
               
180-623
               

               
Cow position:
               
chr15:21803311-21803763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
30, 149
               

               
Conread position:
               
181-494
               

               
Cow position:
               
chr15:31545004-31545325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
29, 171
               

               
Conread position:
               
181-631
               

               
Cow position:
               
chr15:22938433-22938873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 7
               

               
Conread position:
               
183-514
               

               
Cow position:
               
chr15:43776678-43776356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
84, 24
               

               
Conread position:
               
184-561
               

               
Cow position:
               
chr15:2144790-2145180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
80, 24
               

               
Conread position:
               
185-440
               

               
Cow position:
               
chr15:6586372-6586639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
25, 196
               

               
Conread position:
               
185-485
               

               
Cow position:
               
chr15:39894919-39894620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
25, 61
               

               
Conread position:
               
185-509
               

               
Cow position:
               
chr15:3572363-3572690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
24, 277
               

               
Conread position:
               
185-588
               

               
Cow position:
               
chr15:39621679-39621268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 108
               

               
Conread position:
               
185-624
               

               
Cow position:
               
chr15:39406075-39405643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
77, 170
               

               
Conread position:
               
185-631
               

               
Cow position:
               
chr15:8665241-8665713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
25, 365
               

               
Conread position:
               
186-627
               

               
Cow position:
               
chr15:29810449-29810023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 102
               

               
Conread position:
               
186-631
               

               
Cow position:
               
chr15:12723418-12722978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 24
               

               
Conread position:
               
187-455
               

               
Cow position:
               
chr15:47105375-47105104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
78, 155
               

               
Conread position:
               
187-545
               

               
Cow position:
               
chr15:5730276-5729913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 133
               

               
Conread position:
               
187-627
               

               
Cow position:
               
chr15:10245670-10246097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
80, 21
               

               
Conread position:
               
187-631
               

               
Cow position:
               
chr15:19771463-19771031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 47
               

               
Conread position:
               
190-435
               

               
Cow position:
               
chr15:21523126-21522869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
13, 219
               

               
Conread position:
               
191-624
               

               
Cow position:
               
chr15:30002024-30001597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
72, 235
               

               
Conread position:
               
191-631
               

               
Cow position:
               
chr15:31857927-31857483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 226
               

               
Conread position:
               
194-487
               

               
Cow position:
               
chr15:5633004-5632712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
22, 78
               

               
Conread position:
               
194-529
               

               
Cow position:
               
chr15:24128352-24128024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
16, 64
               

               
Conread position:
               
197-631
               

               
Cow position:
               
chr15:37645298-37644883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
64, 11
               

               
Conread position:
               
198-622
               

               
Cow position:
               
chr15:35112560-35112970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
12, 68
               

               
Conread position:
               
199-493
               

               
Cow position:
               
chr15:21908261-21907960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 31
               

               
Conread position:
               
199-627
               

               
Cow position:
               
chr15:12304968-12304537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 16
               

               
Conread position:
               
199-631
               

               
Cow position:
               
chr15:49922466-49922029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 324
               

               
Conread position:
               
200-563
               

               
Cow position:
               
chr15:26573712-26573337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
67, 205
               

               
Conread position:
               
200-616
               

               
Cow position:
               
chr15:38394745-38394336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
66, 197
               

               
Conread position:
               
201-625
               

               
Cow position:
               
chr15:26903518-26903093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
60, 96
               

               
Conread position:
               
202-616
               

               
Cow position:
               
chr15:17763224-17762817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 69
               

               
Conread position:
               
204-630
               

               
Cow position:
               
chr15:39598560-39598140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 180
               

               
Conread position:
               
208-631
               

               
Cow position:
               
chr15:10088631-10088213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 67
               

               
Conread position:
               
208-631
               

               
Cow position:
               
chr15:11995708-11996134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 310
               

               
Conread position:
               
209-631
               

               
Cow position:
               
chr15:20082076-20081668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
56, 164
               

               
Conread position:
               
211-423
               

               
Cow position:
               
chr15:10846036-10845814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
54, 195
               

               
Conread position:
               
220-630
               

               
Cow position:
               
chr15:225498-225908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
37, 65
               

               
Conread position:
               
220-631
               

               
Cow position:
               
chr15:8007286-8006872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
40, 7
               

               
Conread position:
               
224-624
               

               
Cow position:
               
chr15:24031480-24031097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
90, 8
               

               
Conread position:
               
224-631
               

               
Cow position:
               
chr15:1722550-1722947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 17
               

               
Conread position:
               
225-467
               

               
Cow position:
               
chr15:11646189-11646441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
226-631
               

               
Cow position:
               
chr15:5071801-5072204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
35, 168
               

               
Conread position:
               
227-630
               

               
Cow position:
               
chr15:53036682-53037067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
114, 54
               

               
Conread position:
               
228-495
               

               
Cow position:
               
chr15:23115132-23114857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
66, 46
               

               
Conread position:
               
231-494
               

               
Cow position:
               
chr15:26117788-26117546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
231-620
               

               
Cow position:
               
chr15:23696623-23696997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 36
               

               
Conread position:
               
235-625
               

               
Cow position:
               
chr15:33643376-33642990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 117
               

               
Conread position:
               
241-625
               

               
Cow position:
               
chr15:23275812-23275433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 9
               

               
Conread position:
               
253-621
               

               
Cow position:
               
chr15:245046-244686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 91
               

               
Conread position:
               
254-509
               

               
Cow position:
               
chr15:37205312-37205057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
23, 131
               

               
Conread position:
               
259-616
               

               
Cow position:
               
chr15:1804071-1804424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
67, 156
               

               
Conread position:
               
259-624
               

               
Cow position:
               
chr15:20279136-20279497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
56, 185
               

               
Conread position:
               
259-624
               

               
Cow position:
               
chr15:20285735-20286096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
56, 185
               

               
Conread position:
               
259-627
               

               
Cow position:
               
chr15:41125310-41125659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 148
               

               
Conread position:
               
260-382
               

               
Cow position:
               
chr15:25689236-25689118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
260-442
               

               
Cow position:
               
chr15:34144895-34145078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
60, 130
               

               
Conread position:
               
260-443
               

               
Cow position:
               
chr15:5715812-5715626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
96, 83
               

               
Conread position:
               
260-456
               

               
Cow position:
               
chr15:12441565-12441763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
54, 140
               

               
Conread position:
               
260-466
               

               
Cow position:
               
chr15:38103634-38103833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
81, 46
               

               
Conread position:
               
260-481
               

               
Cow position:
               
chr15:38877047-38877267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 68
               

               
Conread position:
               
260-487
               

               
Cow position:
               
chr15:7456957-7456728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
81, 136
               

               
Conread position:
               
260-493
               

               
Cow position:
               
chr15:22854664-22854430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
57, 88
               

               
Conread position:
               
260-495
               

               
Cow position:
               
chr15:9526212-9526455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
9, 135
               

               
Conread position:
               
260-495
               

               
Cow position:
               
chr15:20046557-20046322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
55, 42
               

               
Conread position:
               
260-496
               

               
Cow position:
               
chr15:31907908-31907670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
58, 199
               

               
Conread position:
               
260-499
               

               
Cow position:
               
chr15:17858978-17859207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
81, 58
               

               
Conread position:
               
260-509
               

               
Cow position:
               
chr15:31599591-31599343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
69, 58
               

               
Conread position:
               
260-509
               

               
Cow position:
               
chr15:35417365-35417616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
74, 26
               

               
Conread position:
               
260-510
               

               
Cow position:
               
chr15:4857049-4856807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
66, 131
               

               
Conread position:
               
260-510
               

               
Cow position:
               
chr15:24305222-24305473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
81, 57
               

               
Conread position:
               
260-568
               

               
Cow position:
               
chr15:39316575-39316886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
60, 105
               

               
Conread position:
               
260-621
               

               
Cow position:
               
chr15:9622449-9622084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
54, 72
               

               
Conread position:
               
260-622
               

               
Cow position:
               
chr15:23598052-23598436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
55, 157
               

               
Conread position:
               
260-624
               

               
Cow position:
               
chr15:84990-85345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
57, 11
               

               
Conread position:
               
260-624
               

               
Cow position:
               
chr15:2968593-2968235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
60, 31
               

               
Conread position:
               
260-624
               

               
Cow position:
               
chr15:23572419-23572788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
62, 117
               

               
Conread position:
               
260-624
               

               
Cow position:
               
chr15:41045662-41045303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
56, 106
               

               
Conread position:
               
260-625
               

               
Cow position:
               
chr15:4861654-4862007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
60, 131
               

               
Conread position:
               
260-627
               

               
Cow position:
               
chr15:2141040-2141424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
58, 83
               

               
Conread position:
               
260-630
               

               
Cow position:
               
chr15:32323945-32324313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
49, 123
               

               
Conread position:
               
260-631
               

               
Cow position:
               
chr15:16667243-16667604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
127, 84
               

               
Conread position:
               
260-631
               

               
Cow position:
               
chr15:26919018-26919375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 58
               

               
Conread position:
               
260-631
               

               
Cow position:
               
chr15:31137205-31137571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
55, 156
               

               
Conread position:
               
260-631
               

               
Cow position:
               
chr15:36888083-36887733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
260-631
               

               
Cow position:
               
chr15:41225305-41225678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
126, 84
               

               
Conread position:
               
260-631
               

               
Cow position:
               
chr15:45584981-45584616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
54, 79
               

               
Conread position:
               
260-631
               

               
Cow position:
               
chr15:47843851-47844194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 105
               

               
Conread position:
               
261-412
               

               
Cow position:
               
chr15:49230086-49230234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
10, 81
               

               
Conread position:
               
261-610
               

               
Cow position:
               
chr15:11560256-11560603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
57, 13
               

               
Conread position:
               
261-621
               

               
Cow position:
               
chr15:14888380-14888733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
49, 25
               

               
Conread position:
               
261-631
               

               
Cow position:
               
chr15:275902-275537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 98
               

               
Conread position:
               
262-392
               

               
Cow position:
               
chr15:36347023-36346885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
262-620
               

               
Cow position:
               
chr15:38838004-38837649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
55, 120
               

               
Conread position:
               
262-623
               

               
Cow position:
               
chr15:25907166-25906820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 60
               

               
Conread position:
               
262-631
               

               
Cow position:
               
chr15:44658615-44658260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
58, 132
               

               
Conread position:
               
263-612
               

               
Cow position:
               
chr15:32242235-32241888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
55, 79
               

               
Conread position:
               
264-481
               

               
Cow position:
               
chr15:16904883-16904667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
55, 130
               

               
Conread position:
               
264-510
               

               
Cow position:
               
chr15:6905317-6905085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
264-513
               

               
Cow position:
               
chr15:53045623-53045871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
76, 64
               

               
Conread position:
               
264-568
               

               
Cow position:
               
chr15:22871862-22871570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
56, 140
               

               
Conread position:
               
264-628
               

               
Cow position:
               
chr15:18671192-18671552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 256
               

               
Conread position:
               
265-627
               

               
Cow position:
               
chr15:22553291-22553643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 23
               

               
Conread position:
               
266-509
               

               
Cow position:
               
chr15:9970722-9970969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
7, 27
               

               
Conread position:
               
266-597
               

               
Cow position:
               
chr15:25386696-25386366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
55, 119
               

               
Conread position:
               
269-405
               

               
Cow position:
               
chr15:33770868-33770730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
54, 79
               

               
Conread position:
               
269-619
               

               
Cow position:
               
chr15:10608055-10608403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
72, 127
               

               
Conread position:
               
269-623
               

               
Cow position:
               
chr15:11559106-11559450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
51, 22
               

               
Conread position:
               
269-624
               

               
Cow position:
               
chr15:16657744-16657371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
51, 274
               

               
Conread position:
               
269-631
               

               
Cow position:
               
chr15:49274206-49273856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
11, 135
               

               
Conread position:
               
271-629
               

               
Cow position:
               
chr15:16261562-16261226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 28
               

               
Conread position:
               
271-631
               

               
Cow position:
               
chr15:5726573-5726209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
49, 145
               

               
Conread position:
               
272-624
               

               
Cow position:
               
chr15:18975518-18975862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
42, 129
               

               
Conread position:
               
274-510
               

               
Cow position:
               
chr15:3726364-3726132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
67, 46
               

               
Conread position:
               
274-621
               

               
Cow position:
               
chr15:8354289-8353945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 241
               

               
Conread position:
               
275-568
               

               
Cow position:
               
chr15:35945771-35945485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
13, 44
               

               
Conread position:
               
275-631
               

               
Cow position:
               
chr15:16018279-16017927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
44, 65
               

               
Conread position:
               
276-597
               

               
Cow position:
               
chr15:50265246-50265560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
50, 27
               

               
Conread position:
               
277-509
               

               
Cow position:
               
chr15:24411656-24411430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
51, 64
               

               
Conread position:
               
279-581
               

               
Cow position:
               
chr15:49258103-49257790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
62, 90
               

               
Conread position:
               
285-496
               

               
Cow position:
               
chr15:10512036-10512250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
90, 103
               

               
Conread position:
               
286-508
               

               
Cow position:
               
chr15:43599418-43599199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
110, 11
               

               
Conread position:
               
286-631
               

               
Cow position:
               
chr15:9879162-9879486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 98
               

               
Conread position:
               
287-580
               

               
Cow position:
               
chr15:39783190-39782903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
33, 115
               

               
Conread position:
               
289-559
               

               
Cow position:
               
chr15:9107267-9106995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
26, 226
               

               
Conread position:
               
292-495
               

               
Cow position:
               
chr15:7307925-7308134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
26, 119
               

               
Conread position:
               
292-609
               

               
Cow position:
               
chr15:17337586-17337285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 104
               

               
Conread position:
               
292-616
               

               
Cow position:
               
chr15:36353896-36353578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 78
               

               
Conread position:
               
292-627
               

               
Cow position:
               
chr15:14576562-14576228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 227
               

               
Conread position:
               
292-630
               

               
Cow position:
               
chr15:53716660-53716329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 79
               

               
Conread position:
               
292-631
               

               
Cow position:
               
chr15:4178709-4179045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
49, 85
               

               
Conread position:
               
292-631
               

               
Cow position:
               
chr15:4418173-4418508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
22, 122
               

               
Conread position:
               
293-495
               

               
Cow position:
               
chr15:38036712-38036924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
26, 121
               

               
Conread position:
               
293-624
               

               
Cow position:
               
chr15:22930113-22930449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
21, 100
               

               
Conread position:
               
293-631
               

               
Cow position:
               
chr15:1503131-1502807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
48, 25
               

               
Conread position:
               
293-631
               

               
Cow position:
               
chr15:2380583-2380259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
48, 103
               

               
Conread position:
               
294-616
               

               
Cow position:
               
chr15:24981967-24982270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
48, 101
               

               
Conread position:
               
294-625
               

               
Cow position:
               
chr15:11987183-11987509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
25, 104
               

               
Conread position:
               
294-631
               

               
Cow position:
               
chr15:1857953-1857620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
43, 227
               

               
Conread position:
               
298-610
               

               
Cow position:
               
chr15:23865846-23866157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
17, 73
               

               
Conread position:
               
300-509
               

               
Cow position:
               
chr15:8253839-8254035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
41, 19
               

               
Conread position:
               
300-631
               

               
Cow position:
               
chr15:30470750-30471085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 96
               

               
Conread position:
               
301-621
               

               
Cow position:
               
chr15:662250-662560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
17, 113
               

               
Conread position:
               
304-631
               

               
Cow position:
               
chr15:33178209-33178532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
30, 169
               

               
Conread position:
               
304-631
               

               
Cow position:
               
chr15:51307464-51307776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
37, 203
               

               
Conread position:
               
305-578
               

               
Cow position:
               
chr15:21821203-21820938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
14, 161
               

               
Conread position:
               
307-510
               

               
Cow position:
               
chr15:39326299-39326509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
11, 131
               

               
Conread position:
               
307-576
               

               
Cow position:
               
chr15:35440868-35441130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
89, 27
               

               
Conread position:
               
312-631
               

               
Cow position:
               
chr15:5717917-5717613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
85, 37
               

               
Conread position:
               
313-624
               

               
Cow position:
               
chr15:36636242-36635930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
103, 51
               

               
Conread position:
               
313-630
               

               
Cow position:
               
chr15:5158581-5158266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
25, 75
               

               
Conread position:
               
314-577
               

               
Cow position:
               
chr15:35204943-35205210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
27, 93
               

               
Conread position:
               
315-507
               

               
Cow position:
               
chr15:12359240-12359045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
26, 83
               

               
Conread position:
               
315-631
               

               
Cow position:
               
chr15:31928694-31929004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
26, 60
               

               
Conread position:
               
317-506
               

               
Cow position:
               
chr15:18647581-18647392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
12, 152
               

               
Conread position:
               
317-627
               

               
Cow position:
               
chr15:37865568-37865258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
83, 20
               

               
Conread position:
               
318-624
               

               
Cow position:
               
chr15:40379413-40379113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
23, 97
               

               
Conread position:
               
320-615
               

               
Cow position:
               
chr15:38935607-38935314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
24, 81
               

               
Conread position:
               
322-557
               

               
Cow position:
               
chr15:48710856-48711087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
24, 151
               

               
Conread position:
               
322-623
               

               
Cow position:
               
chr15:9465875-9465576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
19, 52
               

               
Conread position:
               
322-623
               

               
Cow position:
               
chr15:38652425-38652701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
322-630
               

               
Cow position:
               
chr15:49784093-49784386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
25, 46
               

               
Conread position:
               
325-615
               

               
Cow position:
               
chr15:19807523-19807813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
16, 61
               

               
Conread position:
               
325-617
               

               
Cow position:
               
chr15:34284217-34284502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
16, 45
               

               
Conread position:
               
325-625
               

               
Cow position:
               
chr15:14740489-14740787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
16, 64
               

               
Conread position:
               
325-631
               

               
Cow position:
               
chr15:43673743-43674052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
16, 56
               

               
Conread position:
               
327-576
               

               
Cow position:
               
chr15:12843-12584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
14, 226
               

               
Conread position:
               
338-631
               

               
Cow position:
               
chr15:6232836-6233121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
143, 76
               

               
Conread position:
               
338-631
               

               
Cow position:
               
chr15:36845994-36846293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 79
               

               
Conread position:
               
339-631
               

               
Cow position:
               
chr15:10400092-10400381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
108, 59
               

               
Conread position:
               
339-631
               

               
Cow position:
               
chr15:29542059-29541759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
40, 171
               

               
Conread position:
               
339-631
               

               
Cow position:
               
chr15:39286234-39286517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
220, 40
               

               
Conread position:
               
339-631
               

               
Cow position:
               
chr15:39832797-39833084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
82, 45
               

               
Conread position:
               
339-631
               

               
Cow position:
               
chr15:50552350-50552640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
52, 164
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr15:31175978-31175745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
47, 133
               

               
Conread position:
               
341-510
               

               
Cow position:
               
chr15:35425637-35425801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
72, 48
               

               
Conread position:
               
341-623
               

               
Cow position:
               
chr15:36776450-36776171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
17, 87
               

               
Conread position:
               
342-507
               

               
Cow position:
               
chr15:13285193-13285032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
342-631
               

               
Cow position:
               
chr15:41527802-41528072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
45, 8
               

               
Conread position:
               
343-616
               

               
Cow position:
               
chr15:43851410-43851678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
46, 93
               

               
Conread position:
               
344-495
               

               
Cow position:
               
chr15:38723623-38723774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
67, 57
               

               
Conread position:
               
345-627
               

               
Cow position:
               
chr15:10442331-10442613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
56, 82
               

               
Conread position:
               
346-554
               

               
Cow position:
               
chr15:16908603-16908403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
46, 34
               

               
Conread position:
               
346-631
               

               
Cow position:
               
chr15:13432665-13432376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
44, 23
               

               
Conread position:
               
349-630
               

               
Cow position:
               
chr15:24452906-24453184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
67, 37
               

               
Conread position:
               
350-622
               

               
Cow position:
               
chr15:41056037-41056306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
63, 33
               

               
Conread position:
               
350-631
               

               
Cow position:
               
chr15:14988157-14987889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
61, 14
               

               
Conread position:
               
352-566
               

               
Cow position:
               
chr15:14176334-14176541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
352-611
               

               
Cow position:
               
chr15:40014834-40015091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
64, 79
               

               
Conread position:
               
353-625
               

               
Cow position:
               
chr15:13782803-13783068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
37, 46
               

               
Conread position:
               
354-631
               

               
Cow position:
               
chr15:41053603-41053877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
25, 17
               

               
Conread position:
               
354-631
               

               
Cow position:
               
chr15:42888674-42888941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
94, 59
               

               
Conread position:
               
356-566
               

               
Cow position:
               
chr15:26718759-26718964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
59, 112
               

               
Conread position:
               
356-623
               

               
Cow position:
               
chr15:5658001-5657719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
59, 69
               

               
Conread position:
               
356-624
               

               
Cow position:
               
chr15:31028495-31028759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
45, 17
               

               
Conread position:
               
357-507
               

               
Cow position:
               
chr15:37284616-37284464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
53, 20
               

               
Conread position:
               
357-627
               

               
Cow position:
               
chr15:49132208-49131957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
358-625
               

               
Cow position:
               
chr15:25571648-25571912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
43, 36
               

               
Conread position:
               
360-552
               

               
Cow position:
               
chr15:40415481-40415670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
53, 29
               

               
Conread position:
               
360-609
               

               
Cow position:
               
chr15:4694903-4694663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
53, 156
               

               
Conread position:
               
361-504
               

               
Cow position:
               
chr15:52809426-52809568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
82, 54
               

               
Conread position:
               
361-568
               

               
Cow position:
               
chr15:25650264-25650454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
361-613
               

               
Cow position:
               
chr15:13395707-13395460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
34, 17
               

               
Conread position:
               
361-631
               

               
Cow position:
               
chr15:36952043-36952305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
25, 111
               

               
Conread position:
               
362-631
               

               
Cow position:
               
chr15:3695790-3695531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
53, 109
               

               
Conread position:
               
362-631
               

               
Cow position:
               
chr15:38827169-38827421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
363-551
               

               
Cow position:
               
chr15:44237573-44237389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
52, 43
               

               
Conread position:
               
363-631
               

               
Cow position:
               
chr15:15177469-15177211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
143, 36
               

               
Conread position:
               
364-505
               

               
Cow position:
               
chr15:78727-78585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
51, 102
               

               
Conread position:
               
366-536
               

               
Cow position:
               
chr15:39090444-39090282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
27, 34
               

               
Conread position:
               
368-631
               

               
Cow position:
               
chr15:52317208-52316954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
42, 135
               

               
Conread position:
               
370-564
               

               
Cow position:
               
chr15:34751233-34751047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
45, 24
               

               
Conread position:
               
372-631
               

               
Cow position:
               
chr15:14281697-14281429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
43, 141
               

               
Conread position:
               
374-631
               

               
Cow position:
               
chr15:19553779-19554032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
24, 37
               

               
Conread position:
               
379-624
               

               
Cow position:
               
chr15:42381062-42380829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
381-631
               

               
Cow position:
               
chr15:40835251-40835009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
19, 131
               

               
Conread position:
               
384-624
               

               
Cow position:
               
chr15:13701632-13701871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
27, 127
               

               
Conread position:
               
388-576
               

               
Cow position:
               
chr15:40594378-40594559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
389-631
               

               
Cow position:
               
chr15:50333110-50332869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
26, 87
               

               
Conread position:
               
390-631
               

               
Cow position:
               
chr15:26851101-26851330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
81, 5
               

               
Conread position:
               
395-568
               

               
Cow position:
               
chr15:11912434-11912603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
20, 74
               

               
Conread position:
               
399-631
               

               
Cow position:
               
chr15:27063403-27063623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
5, 15
               

               
Conread position:
               
400-623
               

               
Cow position:
               
chr15:10049195-10049412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
171, 64
               

               
Conread position:
               
401-616
               

               
Cow position:
               
chr15:22984691-22984477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
165, 35
               

               
Conread position:
               
402-624
               

               
Cow position:
               
chr15:7750793-7751013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
13, 32
               

               
Conread position:
               
412-631
               

               
Cow position:
               
chr15:26442321-26442108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
414-631
               

               
Cow position:
               
chr15:19002172-19002389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
32, 102
               

               
Conread position:
               
415-631
               

               
Cow position:
               
chr15:11908848-11909053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
416-627
               

               
Cow position:
               
chr15:15154402-15154197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
416-629
               

               
Cow position:
               
chr15:18776649-18776875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
418-631
               

               
Cow position:
               
chr15:41475731-41475933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
419-631
               

               
Cow position:
               
chr15:2931467-2931677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
37, 63
               

               
Conread position:
               
422-630
               

               
Cow position:
               
chr15:49483724-49483521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
424-624
               

               
Cow position:
               
chr15:34223960-34223768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
195, 87
               

               
Conread position:
               
426-631
               

               
Cow position:
               
chr15:10153757-10153565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
429-627
               

               
Cow position:
               
chr15:15992554-15992743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
431-624
               

               
Cow position:
               
chr15:36422699-36422519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
433-631
               

               
Cow position:
               
chr15:43715412-43715224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
38, 81
               

               
Conread position:
               
434-624
               

               
Cow position:
               
chr15:28099196-28099013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
434-630
               

               
Cow position:
               
chr15:5691182-5690996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
190, 39
               

               
Conread position:
               
434-631
               

               
Cow position:
               
chr15:52792021-52791834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
437-631
               

               
Cow position:
               
chr15:12045456-12045647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
443-631
               

               
Cow position:
               
chr15:46283842-46284022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
464-630
               

               
Cow position:
               
chr15:18703881-18704038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
465-631
               

               
Cow position:
               
chr15:40844567-40844727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
54, 62
               
Show alignments to all cow chromosomes.