Cow genome map

Conread name: OvaP-UMC-pputal2-003-f07

Conread position: 1-367
Cow position: chr20:17831450-17831828 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 73

Conread position: 1-439
Cow position: chr20:14832016-14831559 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 78

Conread position: 1-447
Cow position: chr20:23833740-23834189 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 10

Conread position: 1-461
Cow position: chr20:9474004-9473539 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 68

Conread position: 1-495
Cow position: chr20:5958295-5957793 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 67

Conread position: 1-495
Cow position: chr20:11176638-11176138 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 41

Conread position: 1-495
Cow position: chr20:26826013-26825519 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 67

Conread position: 1-504
Cow position: chr20:13821979-13821462 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 74

Conread position: 1-532
Cow position: chr20:26076691-26077229 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 74

Conread position: 1-615
Cow position: chr20:8429360-8429961 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 68

Conread position: 1-631
Cow position: chr20:13877100-13876471 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 68

Conread position: 2-390
Cow position: chr20:5104824-5104436 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 68

Conread position: 2-407
Cow position: chr20:17734166-17733756 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 156

Conread position: 2-412
Cow position: chr20:10468685-10469090 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 67

Conread position: 2-428
Cow position: chr20:14756459-14756025 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 70

Conread position: 2-458
Cow position: chr20:18185183-18185638 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 40

Conread position: 2-461
Cow position: chr20:9536747-9537214 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 67

Conread position: 2-495
Cow position: chr20:9014738-9014238 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 63

Conread position: 2-495
Cow position: chr20:34001779-34001280 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 67

Conread position: 2-598
Cow position: chr20:40781587-40782172 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 67

Conread position: 2-611
Cow position: chr20:31927848-31927242 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 67

Conread position: 2-618
Cow position: chr20:9433222-9433807 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 56

Conread position: 2-618
Cow position: chr20:40423485-40422873 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 73

Conread position: 2-623
Cow position: chr20:4945635-4945020 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 67

Conread position: 2-623
Cow position: chr20:7806952-7806336 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 63

Conread position: 2-623
Cow position: chr20:39418271-39417673 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 67

Conread position: 2-624
Cow position: chr20:2819185-2819779 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 319, 35

Conread position: 2-630
Cow position: chr20:14572762-14572140 (view UCSC Genome Browser custom track)
Alignm length: 660
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 33

Conread position: 2-631
Cow position: chr20:3599787-3599164 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 71

Conread position: 2-631
Cow position: chr20:12996403-12995755 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 170

Conread position: 2-631
Cow position: chr20:34202259-34202880 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 67

Conread position: 3-392
Cow position: chr20:23679542-23679141 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 72

Conread position: 3-412
Cow position: chr20:21324718-21325140 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 73

Conread position: 3-435
Cow position: chr20:27339674-27340112 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 66

Conread position: 3-441
Cow position: chr20:24391606-24392034 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 71

Conread position: 3-504
Cow position: chr20:6258451-6257940 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 66

Conread position: 3-537
Cow position: chr20:6423579-6424117 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 45

Conread position: 3-561
Cow position: chr20:6096873-6096326 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 67

Conread position: 3-564
Cow position: chr20:23065232-23064663 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 72

Conread position: 3-593
Cow position: chr20:6239036-6238420 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 66

Conread position: 3-624
Cow position: chr20:34597512-34596872 (view UCSC Genome Browser custom track)
Alignm length: 657
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 133

Conread position: 3-624
Cow position: chr20:36780124-36779488 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 72

Conread position: 3-627
Cow position: chr20:13269238-13269848 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 65

Conread position: 3-628
Cow position: chr20:32846964-32847577 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 66

Conread position: 3-631
Cow position: chr20:4756211-4755596 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 66

Conread position: 3-631
Cow position: chr20:21019177-21019796 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 65

Conread position: 3-631
Cow position: chr20:23871209-23870558 (view UCSC Genome Browser custom track)
Alignm length: 661
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 70

Conread position: 3-631
Cow position: chr20:35145618-35146252 (view UCSC Genome Browser custom track)
Alignm length: 653
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 67

Conread position: 4-407
Cow position: chr20:31077148-31077578 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 66

Conread position: 4-423
Cow position: chr20:6848219-6848668 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 303
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 120, 24

Conread position: 4-423
Cow position: chr20:26469466-26469025 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 65

Conread position: 4-573
Cow position: chr20:11549978-11550546 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 65

Conread position: 4-631
Cow position: chr20:20983638-20984235 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 30

Conread position: 5-380
Cow position: chr20:17820591-17820228 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 63

Conread position: 5-435
Cow position: chr20:3781819-3781374 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 5-457
Cow position: chr20:35970558-35971010 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 61

Conread position: 5-510
Cow position: chr20:33363128-33363642 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 29

Conread position: 5-622
Cow position: chr20:25162482-25161902 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 22

Conread position: 5-626
Cow position: chr20:40176866-40177477 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 262, 65

Conread position: 5-630
Cow position: chr20:8577861-8578492 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 260, 64

Conread position: 5-631
Cow position: chr20:398676-398074 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 30

Conread position: 5-631
Cow position: chr20:10235465-10236056 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 65

Conread position: 6-413
Cow position: chr20:19410751-19410336 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 63

Conread position: 6-616
Cow position: chr20:31747009-31746413 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 64

Conread position: 6-622
Cow position: chr20:5702362-5702951 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 63

Conread position: 6-631
Cow position: chr20:28604829-28605444 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 63

Conread position: 7-405
Cow position: chr20:33176815-33177209 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 289
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 203, 63

Conread position: 7-540
Cow position: chr20:19363746-19363213 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 62

Conread position: 7-631
Cow position: chr20:14806501-14807121 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 27

Conread position: 8-444
Cow position: chr20:22446021-22445589 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 61

Conread position: 8-466
Cow position: chr20:19146484-19146957 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 34

Conread position: 8-594
Cow position: chr20:7757011-7756428 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 61

Conread position: 8-619
Cow position: chr20:23792218-23792822 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 63

Conread position: 9-631
Cow position: chr20:746577-747170 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 60

Conread position: 10-568
Cow position: chr20:18321176-18320615 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 59

Conread position: 10-630
Cow position: chr20:20966975-20967556 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 59

Conread position: 11-445
Cow position: chr20:27978115-27977644 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 311
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 33, 64

Conread position: 17-388
Cow position: chr20:33170246-33169870 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 52

Conread position: 17-478
Cow position: chr20:7131984-7132444 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 18

Conread position: 18-631
Cow position: chr20:33531936-33532528 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 51

Conread position: 19-465
Cow position: chr20:22896954-22897404 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 49

Conread position: 20-466
Cow position: chr20:40256617-40257050 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 19

Conread position: 21-504
Cow position: chr20:19460011-19459547 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 360, 45

Conread position: 27-631
Cow position: chr20:40304213-40303644 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 42

Conread position: 31-624
Cow position: chr20:28982341-28982929 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 37

Conread position: 35-509
Cow position: chr20:33144910-33144430 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 37

Conread position: 35-565
Cow position: chr20:39415398-39415923 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 34

Conread position: 42-623
Cow position: chr20:35889116-35888529 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 26

Conread position: 43-392
Cow position: chr20:12334033-12334382 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 28

Conread position: 45-597
Cow position: chr20:20202869-20203418 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 24

Conread position: 45-627
Cow position: chr20:24069468-24070036 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 27

Conread position: 47-563
Cow position: chr20:19750967-19751480 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 23

Conread position: 47-631
Cow position: chr20:8556613-8556032 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 21

Conread position: 47-631
Cow position: chr20:38817671-38818227 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 22

Conread position: 48-435
Cow position: chr20:15068804-15069189 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 23

Conread position: 52-509
Cow position: chr20:28956007-28955578 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 262, 74

Conread position: 60-552
Cow position: chr20:9412164-9412648 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 9

Conread position: 60-621
Cow position: chr20:7549925-7550462 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 95

Conread position: 60-631
Cow position: chr20:31740544-31739979 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 10

Conread position: 67-627
Cow position: chr20:39398155-39398716 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 14

Conread position: 69-624
Cow position: chr20:18392563-18392026 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 83

Conread position: 70-631
Cow position: chr20:19328080-19328636 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 11

Conread position: 71-417
Cow position: chr20:14615299-14614967 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 243
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 143, 98

Conread position: 74-631
Cow position: chr20:6054822-6054269 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 18

Conread position: 74-631
Cow position: chr20:17251392-17251957 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 95

Conread position: 81-630
Cow position: chr20:21345090-21345676 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 92

Conread position: 84-409
Cow position: chr20:18399452-18399786 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 85

Conread position: 84-631
Cow position: chr20:5998984-5998423 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 221

Conread position: 85-509
Cow position: chr20:35797299-35797732 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 23

Conread position: 88-631
Cow position: chr20:6240834-6240282 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 81

Conread position: 90-380
Cow position: chr20:207326-207025 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 210
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 131, 79

Conread position: 97-445
Cow position: chr20:15761243-15760890 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 71

Conread position: 103-568
Cow position: chr20:39728161-39728629 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 66

Conread position: 103-625
Cow position: chr20:7426479-7425966 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 20

Conread position: 108-495
Cow position: chr20:10884651-10884244 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 61

Conread position: 110-442
Cow position: chr20:15148305-15147959 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 230
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 43, 10

Conread position: 110-631
Cow position: chr20:12582231-12581718 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 61

Conread position: 110-631
Cow position: chr20:25009923-25009395 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 46

Conread position: 118-569
Cow position: chr20:21714477-21714943 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 60

Conread position: 123-408
Cow position: chr20:22008761-22008472 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 201
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 121, 46

Conread position: 123-481
Cow position: chr20:35958379-35958743 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 45

Conread position: 124-420
Cow position: chr20:31464647-31464341 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 218
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 86, 32

Conread position: 127-631
Cow position: chr20:7659475-7658987 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 46

Conread position: 128-627
Cow position: chr20:42310226-42309733 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 343
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 89, 41

Conread position: 128-631
Cow position: chr20:8703174-8702692 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 44

Conread position: 130-471
Cow position: chr20:13967522-13967171 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 40

Conread position: 133-631
Cow position: chr20:5950889-5950402 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 23

Conread position: 133-631
Cow position: chr20:22064813-22065299 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 36

Conread position: 134-401
Cow position: chr20:15582294-15582023 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 206
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 76, 35

Conread position: 142-507
Cow position: chr20:3607202-3606840 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 27

Conread position: 143-514
Cow position: chr20:35843359-35842998 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 252
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 67, 13

Conread position: 143-631
Cow position: chr20:22235062-22235537 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 206

Conread position: 146-568
Cow position: chr20:39517765-39518188 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 24

Conread position: 149-495
Cow position: chr20:40127580-40127234 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 246
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 61, 20

Conread position: 154-624
Cow position: chr20:11341044-11340574 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 15

Conread position: 156-558
Cow position: chr20:11741541-11741133 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 277
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 84, 261

Conread position: 156-624
Cow position: chr20:10200104-10200580 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 13

Conread position: 156-627
Cow position: chr20:15549135-15548658 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 188

Conread position: 157-443
Cow position: chr20:20312973-20312690 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 12

Conread position: 158-631
Cow position: chr20:32512748-32513243 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 316
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 52, 11

Conread position: 159-631
Cow position: chr20:1640681-1640229 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 331
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 56, 10

Conread position: 160-493
Cow position: chr20:3331527-3331178 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 245
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 50, 9

Conread position: 162-566
Cow position: chr20:5826703-5827114 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 254

Conread position: 162-624
Cow position: chr20:35177004-35176543 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 315
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 33, 7

Conread position: 163-448
Cow position: chr20:18618408-18618698 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 234

Conread position: 163-487
Cow position: chr20:39019465-39019797 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 152

Conread position: 163-502
Cow position: chr20:20360003-20359666 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 223
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 10, 37

Conread position: 169-392
Cow position: chr20:29633216-29632994 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 156
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 41, 97

Conread position: 169-402
Cow position: chr20:25823059-25823301 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 165
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 79, 61

Conread position: 169-421
Cow position: chr20:8910699-8910955 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 193
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 41, 193

Conread position: 169-495
Cow position: chr20:34918053-34918380 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 227
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 13, 119

Conread position: 169-495
Cow position: chr20:41028266-41028598 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 234
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 39, 50

Conread position: 169-504
Cow position: chr20:4205738-4206090 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 169-509
Cow position: chr20:14679393-14679740 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 237
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 41, 61

Conread position: 169-563
Cow position: chr20:29805882-29805488 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 279
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 43, 21

Conread position: 170-476
Cow position: chr20:14735453-14735759 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 230

Conread position: 170-485
Cow position: chr20:20471566-20471884 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 225
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 32, 159

Conread position: 170-504
Cow position: chr20:35897294-35897639 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 219
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 40, 337

Conread position: 170-510
Cow position: chr20:10838443-10838088 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 241
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 73, 38

Conread position: 170-623
Cow position: chr20:12205936-12205514 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 307
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 146, 38

Conread position: 170-625
Cow position: chr20:18551139-18551597 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 307
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 40, 179

Conread position: 170-627
Cow position: chr20:14759888-14759440 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 309
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 40, 139

Conread position: 170-631
Cow position: chr20:7442348-7441904 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 153

Conread position: 170-631
Cow position: chr20:12420845-12420381 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 173

Conread position: 171-412
Cow position: chr20:37200137-37200386 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 182
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 91, 37

Conread position: 171-433
Cow position: chr20:11923464-11923198 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 199
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 11, 76

Conread position: 171-631
Cow position: chr20:26996311-26996772 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 36

Conread position: 172-398
Cow position: chr20:4359876-4359648 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 157
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 13, 47

Conread position: 172-466
Cow position: chr20:22704066-22704375 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 172-495
Cow position: chr20:35009962-35009628 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 237
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 38, 23

Conread position: 173-410
Cow position: chr20:23936635-23936383 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 179
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 37, 9

Conread position: 174-462
Cow position: chr20:24135485-24135195 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 192
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 47, 126

Conread position: 174-514
Cow position: chr20:40511977-40511628 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 150

Conread position: 176-375
Cow position: chr20:11043715-11043513 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 152
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 32, 93

Conread position: 176-623
Cow position: chr20:13023696-13023272 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 315
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 34, 147

Conread position: 177-510
Cow position: chr20:15235547-15235876 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 236
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 40, 31

Conread position: 178-510
Cow position: chr20:34776970-34777304 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 232
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 32, 169

Conread position: 178-555
Cow position: chr20:38768669-38768298 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 231

Conread position: 178-624
Cow position: chr20:39675609-39675172 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 295
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 32, 165

Conread position: 178-630
Cow position: chr20:6890489-6890980 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 334
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 37, 233

Conread position: 180-443
Cow position: chr20:15593082-15593355 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 204
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 30, 65

Conread position: 180-491
Cow position: chr20:19265943-19266259 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 219
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 30, 129

Conread position: 180-569
Cow position: chr20:11482353-11481958 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 270
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 30, 344

Conread position: 180-620
Cow position: chr20:28296076-28296525 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 338

Conread position: 180-630
Cow position: chr20:14879572-14880023 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 152

Conread position: 185-382
Cow position: chr20:35760462-35760666 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 144
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 185-443
Cow position: chr20:9379200-9379463 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 196
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 25, 208

Conread position: 185-478
Cow position: chr20:23505620-23505920 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 208

Conread position: 185-489
Cow position: chr20:7600986-7600675 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 204
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 68, 52

Conread position: 186-421
Cow position: chr20:36331636-36331387 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 177
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 24, 213

Conread position: 186-624
Cow position: chr20:38873220-38872768 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 312
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 23, 125

Conread position: 187-567
Cow position: chr20:38578961-38578585 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 265
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 80, 21

Conread position: 190-490
Cow position: chr20:24000981-24000693 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 210
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 130, 5

Conread position: 190-558
Cow position: chr20:42459055-42458688 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 255
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 59, 215

Conread position: 190-625
Cow position: chr20:38486752-38486325 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 291
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 12, 117

Conread position: 190-631
Cow position: chr20:29754582-29755016 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 294
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 21, 118

Conread position: 190-631
Cow position: chr20:39325181-39325630 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 311
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 20, 177

Conread position: 191-510
Cow position: chr20:15566034-15565705 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 225
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 19, 231

Conread position: 194-509
Cow position: chr20:35907246-35906927 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 223
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 94, 73

Conread position: 194-572
Cow position: chr20:6602841-6603220 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 251

Conread position: 195-487
Cow position: chr20:8607119-8606831 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 221
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 15, 143

Conread position: 198-624
Cow position: chr20:34098154-34097717 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 216

Conread position: 198-626
Cow position: chr20:12239875-12239456 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 125

Conread position: 199-510
Cow position: chr20:31323602-31323911 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 215
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 11, 114

Conread position: 199-631
Cow position: chr20:23846867-23846427 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 342

Conread position: 200-442
Cow position: chr20:37272526-37272771 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 175
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 48, 16

Conread position: 200-631
Cow position: chr20:27408069-27407657 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 20

Conread position: 201-522
Cow position: chr20:32084277-32083946 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 24

Conread position: 201-551
Cow position: chr20:34107924-34108266 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 239
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 38, 104

Conread position: 201-567
Cow position: chr20:11542476-11542106 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 221

Conread position: 202-510
Cow position: chr20:21928714-21929029 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 22

Conread position: 203-631
Cow position: chr20:9923406-9923829 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 283
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 12, 56

Conread position: 208-546
Cow position: chr20:36207617-36207970 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 118

Conread position: 209-461
Cow position: chr20:11864320-11864058 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 182
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 58, 175

Conread position: 209-631
Cow position: chr20:14980698-14980269 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 9

Conread position: 217-631
Cow position: chr20:16935479-16935068 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 173

Conread position: 219-631
Cow position: chr20:7439023-7438619 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 85

Conread position: 220-624
Cow position: chr20:11045505-11045905 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 273
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 75, 225

Conread position: 220-627
Cow position: chr20:2204838-2204452 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 147

Conread position: 224-569
Cow position: chr20:3321307-3320965 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 238
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 40, 67

Conread position: 236-569
Cow position: chr20:32988989-32988655 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 236
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 31, 51

Conread position: 246-631
Cow position: chr20:4334667-4334300 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 269
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 21, 43

Conread position: 249-461
Cow position: chr20:7623197-7622989 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 147
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 91, 35

Conread position: 257-597
Cow position: chr20:20099725-20099391 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 238
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 17, 35

Conread position: 258-623
Cow position: chr20:2298907-2298565 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 124

Conread position: 259-563
Cow position: chr20:15569075-15568778 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 215
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 61, 124

Conread position: 259-620
Cow position: chr20:33067503-33067132 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 258
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 17, 273

Conread position: 260-423
Cow position: chr20:9701705-9701531 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 66, 0

Conread position: 260-455
Cow position: chr20:39247785-39247982 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 81, 30

Conread position: 260-466
Cow position: chr20:18837285-18837077 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 129
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 13, 137

Conread position: 260-494
Cow position: chr20:271551-271315 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 168
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 59, 31

Conread position: 260-495
Cow position: chr20:7210912-7211148 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 129

Conread position: 260-495
Cow position: chr20:36010665-36010905 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 181
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 59, 134

Conread position: 260-495
Cow position: chr20:40446205-40446438 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 170
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 55, 9

Conread position: 260-510
Cow position: chr20:8307889-8308141 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 133

Conread position: 260-551
Cow position: chr20:22978194-22978487 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 16

Conread position: 260-556
Cow position: chr20:5636356-5636647 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 212
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 81, 140

Conread position: 260-559
Cow position: chr20:15312535-15312836 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 221
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 30, 254

Conread position: 260-568
Cow position: chr20:21761648-21761955 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 211
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 54, 87

Conread position: 260-590
Cow position: chr20:22484732-22485059 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 241
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 60, 154

Conread position: 260-597
Cow position: chr20:30710774-30710430 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 242
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 60, 265

Conread position: 260-619
Cow position: chr20:4892950-4892594 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 244
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 55, 215

Conread position: 260-620
Cow position: chr20:20241972-20242318 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 247
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 288, 68

Conread position: 260-623
Cow position: chr20:14433556-14433190 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 259
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 55, 128

Conread position: 260-623
Cow position: chr20:41089918-41089562 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 257
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 156, 77

Conread position: 260-624
Cow position: chr20:32523337-32523694 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 243
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 59, 25

Conread position: 260-630
Cow position: chr20:3254925-3255271 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 260-630
Cow position: chr20:29990564-29990207 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 242
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 360, 58

Conread position: 260-631
Cow position: chr20:28441202-28441557 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 154

Conread position: 261-452
Cow position: chr20:28831841-28832037 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 58, 0

Conread position: 261-471
Cow position: chr20:283052-282840 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 160
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 58, 79

Conread position: 261-631
Cow position: chr20:34221353-34221720 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 153

Conread position: 261-631
Cow position: chr20:39255089-39254723 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 252
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 59, 141

Conread position: 262-509
Cow position: chr20:31080919-31081161 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 173
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 71, 19

Conread position: 262-541
Cow position: chr20:26077789-26077517 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 206
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 21, 122

Conread position: 263-507
Cow position: chr20:35407738-35407972 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 183
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 78, 133

Conread position: 263-630
Cow position: chr20:9267222-9266864 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 259
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 133, 20

Conread position: 263-631
Cow position: chr20:36633692-36634072 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 265
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 51, 142

Conread position: 265-568
Cow position: chr20:40691934-40692240 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 204
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 58, 13

Conread position: 267-456
Cow position: chr20:24833973-24834166 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 135
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 73, 0

Conread position: 269-392
Cow position: chr20:22721902-22722030 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 269-483
Cow position: chr20:30992020-30992239 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 148
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 43, 123

Conread position: 269-510
Cow position: chr20:1575980-1576221 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 175
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 143, 75

Conread position: 269-595
Cow position: chr20:32463640-32463323 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 127

Conread position: 270-409
Cow position: chr20:39154675-39154811 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 76, 20

Conread position: 270-492
Cow position: chr20:23234917-23235137 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 157
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 53, 78

Conread position: 271-490
Cow position: chr20:23643253-23643034 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 149
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 44, 126

Conread position: 271-495
Cow position: chr20:8098165-8098395 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 162
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 48, 127

Conread position: 271-625
Cow position: chr20:8546949-8547292 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 77

Conread position: 272-492
Cow position: chr20:13794873-13795087 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 163
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 48, 63

Conread position: 273-504
Cow position: chr20:36040357-36040593 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 163
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 46, 9

Conread position: 273-572
Cow position: chr20:11188920-11188627 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 211
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 38, 132

Conread position: 273-631
Cow position: chr20:28249068-28249421 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 239
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 42, 112

Conread position: 273-631
Cow position: chr20:31289383-31289741 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 239
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 43, 238

Conread position: 274-370
Cow position: chr20:11392582-11392680 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 67, 0

Conread position: 275-510
Cow position: chr20:19339986-19339757 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 169
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 67, 132

Conread position: 276-629
Cow position: chr20:39267071-39266700 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 183

Conread position: 278-623
Cow position: chr20:10188165-10188505 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 243
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 63, 40

Conread position: 281-495
Cow position: chr20:19616379-19616601 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 162
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 38, 104

Conread position: 284-486
Cow position: chr20:28804459-28804670 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 149
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 48, 34

Conread position: 285-622
Cow position: chr20:24711732-24712069 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 231
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 34, 239

Conread position: 289-628
Cow position: chr20:23286422-23286096 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 228
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 52, 0

Conread position: 289-631
Cow position: chr20:18379283-18379615 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 52

Conread position: 290-622
Cow position: chr20:15822454-15822779 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 227
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 43, 38

Conread position: 291-622
Cow position: chr20:22265342-22265038 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 242
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 50, 125

Conread position: 292-481
Cow position: chr20:21698291-21698489 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 28, 113

Conread position: 292-495
Cow position: chr20:23103124-23103332 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 157
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 49, 0

Conread position: 292-631
Cow position: chr20:7738322-7737996 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 104

Conread position: 292-631
Cow position: chr20:35710076-35710397 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 243
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 49, 74

Conread position: 293-563
Cow position: chr20:8620248-8619980 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 200
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 11, 52

Conread position: 293-631
Cow position: chr20:11611586-11611919 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 229
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 21, 99

Conread position: 296-563
Cow position: chr20:13983271-13983528 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 180
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 100, 64

Conread position: 297-631
Cow position: chr20:15118185-15118516 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 226
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 18, 104

Conread position: 298-509
Cow position: chr20:34084976-34085191 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 148
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 16, 99

Conread position: 298-552
Cow position: chr20:16491983-16492238 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 178
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 43, 22

Conread position: 298-624
Cow position: chr20:18622491-18622806 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 215
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 17, 104

Conread position: 299-576
Cow position: chr20:41883647-41883916 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 193
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 41, 21

Conread position: 300-559
Cow position: chr20:38868557-38868801 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 191
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 41, 10

Conread position: 300-626
Cow position: chr20:32866275-32865969 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 232
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 101, 181

Conread position: 305-629
Cow position: chr20:20926705-20926390 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 215
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 10, 97

Conread position: 305-629
Cow position: chr20:22937395-22937080 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 217
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 10, 97

Conread position: 307-625
Cow position: chr20:33819136-33819461 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 219
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 12, 87

Conread position: 308-620
Cow position: chr20:16548356-16548045 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 219
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 33, 10

Conread position: 308-631
Cow position: chr20:4892182-4891880 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 230
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 62, 15

Conread position: 309-485
Cow position: chr20:17530494-17530314 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 32, 67

Conread position: 309-631
Cow position: chr20:32709528-32709202 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 221
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 92, 30

Conread position: 311-484
Cow position: chr20:21204283-21204456 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 30, 74

Conread position: 312-631
Cow position: chr20:5078548-5078874 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 230
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 29, 203

Conread position: 313-510
Cow position: chr20:17765404-17765207 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 138
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 29, 89

Conread position: 313-619
Cow position: chr20:38670684-38670992 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 228
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 28, 72

Conread position: 313-630
Cow position: chr20:11135831-11135515 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 209
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 84, 28

Conread position: 313-631
Cow position: chr20:5009664-5009970 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 214
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 28, 51

Conread position: 313-631
Cow position: chr20:11548797-11548490 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 224
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 13, 88

Conread position: 313-631
Cow position: chr20:35192703-35192997 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 214
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 28, 94

Conread position: 314-510
Cow position: chr20:30887960-30888159 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 138
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 37, 88

Conread position: 314-630
Cow position: chr20:33976408-33976726 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 211
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 27, 177

Conread position: 318-597
Cow position: chr20:10996039-10996316 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 184
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 23, 78

Conread position: 318-631
Cow position: chr20:6248665-6248361 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 215
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 98, 23

Conread position: 322-630
Cow position: chr20:7624312-7624022 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 222
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 19, 44

Conread position: 322-631
Cow position: chr20:20125102-20124793 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 204
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 9, 83

Conread position: 324-630
Cow position: chr20:24902360-24902037 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 216
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 81, 0

Conread position: 324-631
Cow position: chr20:9376405-9376700 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 209
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 17, 147

Conread position: 325-527
Cow position: chr20:23506532-23506329 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 16, 75

Conread position: 325-568
Cow position: chr20:22030258-22030497 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 174
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 18, 189

Conread position: 325-619
Cow position: chr20:12085487-12085204 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 205
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 16, 69

Conread position: 325-620
Cow position: chr20:354959-354671 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 204
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 16, 73

Conread position: 325-630
Cow position: chr20:38089849-38090153 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 71

Conread position: 329-601
Cow position: chr20:17100302-17100567 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 211
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 12, 73

Conread position: 330-631
Cow position: chr20:11359685-11359401 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 211
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 21, 7

Conread position: 332-630
Cow position: chr20:14620361-14620069 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 202
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 47, 18

Conread position: 334-631
Cow position: chr20:38514728-38515027 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 53

Conread position: 336-629
Cow position: chr20:12126355-12126065 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 204
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 10, 175

Conread position: 338-627
Cow position: chr20:20898638-20898355 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 187
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 170, 0

Conread position: 339-557
Cow position: chr20:10772157-10772372 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 74, 143

Conread position: 339-579
Cow position: chr20:39962529-39962764 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 167
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 76, 59

Conread position: 339-631
Cow position: chr20:16818369-16818656 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 196
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 28, 203

Conread position: 339-631
Cow position: chr20:23548699-23548995 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 193
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 74, 175

Conread position: 340-631
Cow position: chr20:4787059-4786794 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 205
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 50, 117

Conread position: 340-631
Cow position: chr20:39016922-39016631 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 198
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 47, 171

Conread position: 341-629
Cow position: chr20:1294075-1293792 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 198
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 75, 41

Conread position: 344-631
Cow position: chr20:16941330-16941044 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 207
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 56, 11

Conread position: 345-532
Cow position: chr20:21999957-22000144 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 57, 44

Conread position: 345-631
Cow position: chr20:11751608-11751892 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 201
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 46, 129

Conread position: 346-513
Cow position: chr20:39212621-39212452 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 32, 72

Conread position: 346-631
Cow position: chr20:21428120-21428396 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 203
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 67, 54

Conread position: 349-510
Cow position: chr20:6358578-6358744 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 42, 0

Conread position: 356-595
Cow position: chr20:19060869-19060638 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 173
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 54, 38

Conread position: 356-597
Cow position: chr20:21815531-21815772 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 180
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 21, 41

Conread position: 361-567
Cow position: chr20:26723699-26723504 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 34, 0

Conread position: 363-631
Cow position: chr20:15529845-15530098 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 193
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 30, 0

Conread position: 368-631
Cow position: chr20:42166800-42166551 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 187
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 43, 103

Conread position: 369-504
Cow position: chr20:1009722-1009588 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 114
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 46, 6

Conread position: 369-631
Cow position: chr20:40051830-40052086 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 184
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 143, 30

Conread position: 370-628
Cow position: chr20:16291678-16291926 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 174
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 162, 24

Conread position: 370-631
Cow position: chr20:33623562-33623321 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 184
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 231, 25

Conread position: 371-631
Cow position: chr20:36239226-36239488 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 179
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 30, 143

Conread position: 388-631
Cow position: chr20:14282924-14283161 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 161
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 142, 17

Conread position: 393-631
Cow position: chr20:24097005-24097233 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 173
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 9, 121

Conread position: 395-631
Cow position: chr20:3148693-3148919 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 170
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 100, 107

Conread position: 402-625
Cow position: chr20:35445090-35444874 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 163
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 9, 112

Conread position: 404-631
Cow position: chr20:15766127-15766354 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 9, 111

Conread position: 408-631
Cow position: chr20:25021448-25021669 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 150
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 8, 83

Conread position: 414-627
Cow position: chr20:39269057-39268848 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 140, 106

Conread position: 414-631
Cow position: chr20:3564188-3564391 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 156
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 414-631
Cow position: chr20:20158164-20158369 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 97, 0

Conread position: 414-631
Cow position: chr20:36312480-36312273 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 159
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 102, 113

Conread position: 416-631
Cow position: chr20:37090652-37090876 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 160
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 37, 97

Conread position: 417-602
Cow position: chr20:630556-630733 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 418-623
Cow position: chr20:24315001-24314807 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 77, 0

Conread position: 421-621
Cow position: chr20:26041063-26040869 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 147
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 90, 0

Conread position: 421-631
Cow position: chr20:19636141-19635940 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 153
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 180, 88

Conread position: 422-631
Cow position: chr20:21325362-21325563 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 146
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 103, 88

Conread position: 431-627
Cow position: chr20:20590256-20590071 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 80, 0

Conread position: 432-624
Cow position: chr20:19834784-19834600 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 120, 79

Conread position: 440-631
Cow position: chr20:19201585-19201772 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 134
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 67, 0

Conread position: 451-622
Cow position: chr20:27323331-27323498 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 55, 60

Conread position: 452-631
Cow position: chr20:24491962-24491789 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 47, 17

Conread position: 454-631
Cow position: chr20:16977776-16977599 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 124
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 78, 91

Show alignments to all cow chromosomes.