Cow genome map

Conread name: OvaP-UMC-pputal2-003-f07

Conread position: 1-373
Cow position: chr6:50120180-50119802 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 68

Conread position: 1-374
Cow position: chr6:1784159-1783792 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 68

Conread position: 1-387
Cow position: chr6:24327535-24327143 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 74

Conread position: 1-396
Cow position: chr6:1891258-1890837 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 71

Conread position: 1-427
Cow position: chr6:50800811-50800369 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 308
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 41, 75

Conread position: 1-428
Cow position: chr6:6721728-6722140 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 290
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 44, 74

Conread position: 1-442
Cow position: chr6:23987133-23986692 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 308

Conread position: 1-458
Cow position: chr6:38233598-38234028 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 68

Conread position: 1-461
Cow position: chr6:44372342-44371873 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 78

Conread position: 1-470
Cow position: chr6:12629624-12630102 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 25

Conread position: 1-486
Cow position: chr6:52556867-52556383 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 76

Conread position: 1-495
Cow position: chr6:1817259-1816759 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 67

Conread position: 1-504
Cow position: chr6:34549011-34549516 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 73

Conread position: 1-504
Cow position: chr6:60931296-60930782 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 24

Conread position: 1-509
Cow position: chr6:19427050-19427570 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 74

Conread position: 1-509
Cow position: chr6:28476773-28477288 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 80

Conread position: 1-510
Cow position: chr6:9008993-9008491 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 24

Conread position: 1-510
Cow position: chr6:28811396-28810877 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 76

Conread position: 1-510
Cow position: chr6:63197568-63197042 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 78

Conread position: 1-554
Cow position: chr6:36652030-36652585 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 74

Conread position: 1-621
Cow position: chr6:54647919-54647274 (view UCSC Genome Browser custom track)
Alignm length: 652
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 68

Conread position: 1-624
Cow position: chr6:10332502-10331870 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 320

Conread position: 1-630
Cow position: chr6:5302792-5302168 (view UCSC Genome Browser custom track)
Alignm length: 646
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 43

Conread position: 1-631
Cow position: chr6:5095944-5095307 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 59

Conread position: 1-631
Cow position: chr6:21004260-21004915 (view UCSC Genome Browser custom track)
Alignm length: 665
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 70

Conread position: 1-631
Cow position: chr6:32121504-32122130 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 180

Conread position: 1-631
Cow position: chr6:32125673-32126287 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 67

Conread position: 1-631
Cow position: chr6:64431553-64432168 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 68

Conread position: 2-385
Cow position: chr6:10605291-10605684 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 67

Conread position: 2-395
Cow position: chr6:61575199-61575615 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 72

Conread position: 2-419
Cow position: chr6:28343258-28343679 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 66

Conread position: 2-436
Cow position: chr6:22877543-22877109 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 14

Conread position: 2-443
Cow position: chr6:47540132-47540585 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 67

Conread position: 2-456
Cow position: chr6:3979054-3978595 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 68

Conread position: 2-456
Cow position: chr6:24652573-24652127 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 67

Conread position: 2-461
Cow position: chr6:18961913-18961443 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 67

Conread position: 2-463
Cow position: chr6:12623078-12623532 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 67

Conread position: 2-491
Cow position: chr6:48169552-48170040 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 67

Conread position: 2-496
Cow position: chr6:1887040-1886560 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 67

Conread position: 2-496
Cow position: chr6:17090194-17090706 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 71

Conread position: 2-510
Cow position: chr6:36470960-36470441 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 69

Conread position: 2-532
Cow position: chr6:56842767-56843293 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 67

Conread position: 2-553
Cow position: chr6:42565292-42565848 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 68

Conread position: 2-555
Cow position: chr6:31636087-31635519 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 74

Conread position: 2-568
Cow position: chr6:18049418-18048849 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 58

Conread position: 2-621
Cow position: chr6:51835010-51835623 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 67

Conread position: 2-622
Cow position: chr6:2607221-2607834 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 66

Conread position: 2-624
Cow position: chr6:1770587-1769966 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 67

Conread position: 2-624
Cow position: chr6:63252292-63251693 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 67

Conread position: 2-630
Cow position: chr6:29484719-29485317 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 67

Conread position: 2-631
Cow position: chr6:8562323-8562949 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 57

Conread position: 2-631
Cow position: chr6:13366906-13367517 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 32

Conread position: 2-631
Cow position: chr6:16699878-16700489 (view UCSC Genome Browser custom track)
Alignm length: 646
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 68

Conread position: 2-631
Cow position: chr6:18447906-18447280 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 172

Conread position: 2-631
Cow position: chr6:33302018-33302631 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 67

Conread position: 2-631
Cow position: chr6:48567738-48567125 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 69

Conread position: 2-631
Cow position: chr6:66363638-66362997 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 167

Conread position: 3-392
Cow position: chr6:32211017-32210625 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 8

Conread position: 3-394
Cow position: chr6:2012631-2013024 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 24

Conread position: 3-422
Cow position: chr6:16410806-16411224 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 61

Conread position: 3-423
Cow position: chr6:16737629-16738053 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 66

Conread position: 3-435
Cow position: chr6:14839417-14838979 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 32

Conread position: 3-462
Cow position: chr6:49411071-49410624 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 66

Conread position: 3-479
Cow position: chr6:606871-607353 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 39

Conread position: 3-482
Cow position: chr6:44098696-44099179 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 262, 66

Conread position: 3-486
Cow position: chr6:62925392-62924899 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 107

Conread position: 3-568
Cow position: chr6:222831-222287 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 65

Conread position: 3-568
Cow position: chr6:8209973-8209431 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 23

Conread position: 3-613
Cow position: chr6:444936-445545 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 15

Conread position: 3-623
Cow position: chr6:4468368-4468993 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 67

Conread position: 3-624
Cow position: chr6:46292717-46292127 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 39

Conread position: 3-630
Cow position: chr6:17414845-17414216 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 66

Conread position: 3-630
Cow position: chr6:46465436-46466052 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 68

Conread position: 3-630
Cow position: chr6:49399009-49398395 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 66

Conread position: 3-631
Cow position: chr6:11192842-11192245 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 62

Conread position: 3-631
Cow position: chr6:13688209-13687582 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 111

Conread position: 3-631
Cow position: chr6:24781961-24781316 (view UCSC Genome Browser custom track)
Alignm length: 657
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 71

Conread position: 3-631
Cow position: chr6:28147864-28148499 (view UCSC Genome Browser custom track)
Alignm length: 655
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 62

Conread position: 3-631
Cow position: chr6:35725695-35726325 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 22

Conread position: 3-631
Cow position: chr6:52478834-52478176 (view UCSC Genome Browser custom track)
Alignm length: 667
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 66

Conread position: 4-552
Cow position: chr6:11169317-11169860 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 65

Conread position: 4-564
Cow position: chr6:46570735-46571277 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 65

Conread position: 4-597
Cow position: chr6:8636885-8637478 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 55

Conread position: 4-631
Cow position: chr6:32269246-32268652 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 57

Conread position: 4-631
Cow position: chr6:35181637-35181019 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 64

Conread position: 5-440
Cow position: chr6:60456441-60456880 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 64

Conread position: 5-454
Cow position: chr6:9322750-9323214 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 64

Conread position: 5-492
Cow position: chr6:47026087-47026580 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 66

Conread position: 5-548
Cow position: chr6:28977439-28976885 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 67

Conread position: 5-621
Cow position: chr6:45690999-45690393 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 65

Conread position: 5-627
Cow position: chr6:65870636-65871262 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 46

Conread position: 5-630
Cow position: chr6:32867596-32866987 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 64

Conread position: 5-631
Cow position: chr6:23695608-23696229 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 262, 64

Conread position: 5-631
Cow position: chr6:24030985-24031598 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 64

Conread position: 5-631
Cow position: chr6:56849606-56850252 (view UCSC Genome Browser custom track)
Alignm length: 660
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 70

Conread position: 6-391
Cow position: chr6:48807382-48806993 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 272
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 37, 69

Conread position: 6-464
Cow position: chr6:33984557-33985054 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 316
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 37, 68

Conread position: 7-435
Cow position: chr6:642981-642520 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 61

Conread position: 7-550
Cow position: chr6:12550880-12551427 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 62

Conread position: 7-552
Cow position: chr6:24004153-24004695 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 67

Conread position: 7-631
Cow position: chr6:29210114-29210712 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 62

Conread position: 8-406
Cow position: chr6:33852175-33851777 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 17

Conread position: 8-491
Cow position: chr6:6642972-6642506 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 59

Conread position: 8-504
Cow position: chr6:37634404-37634911 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 61

Conread position: 9-504
Cow position: chr6:13592337-13592823 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 341
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 36, 63

Conread position: 9-625
Cow position: chr6:51674524-51675164 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 60

Conread position: 10-627
Cow position: chr6:39358720-39358112 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 59

Conread position: 11-631
Cow position: chr6:61631997-61631373 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 58

Conread position: 14-371
Cow position: chr6:21312137-21311766 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 57

Conread position: 20-396
Cow position: chr6:66431464-66431829 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 55

Conread position: 20-631
Cow position: chr6:8804918-8804308 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 49

Conread position: 23-485
Cow position: chr6:1944358-1944809 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 46

Conread position: 25-504
Cow position: chr6:4864908-4864432 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 44

Conread position: 26-631
Cow position: chr6:18080885-18080281 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 144

Conread position: 29-631
Cow position: chr6:52431399-52430784 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 39

Conread position: 33-509
Cow position: chr6:18583156-18582693 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 321
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 22, 37

Conread position: 35-630
Cow position: chr6:10106360-10105749 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 34

Conread position: 35-631
Cow position: chr6:31535916-31535338 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 33

Conread position: 36-631
Cow position: chr6:2546885-2547496 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 33

Conread position: 37-631
Cow position: chr6:61268977-61269552 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 35

Conread position: 40-504
Cow position: chr6:57685805-57686264 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 27

Conread position: 42-631
Cow position: chr6:5609802-5609207 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 27

Conread position: 44-487
Cow position: chr6:67968982-67968512 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 25

Conread position: 44-615
Cow position: chr6:35842310-35842879 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 25

Conread position: 45-405
Cow position: chr6:54806873-54807243 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 24

Conread position: 46-510
Cow position: chr6:63047228-63047713 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 24

Conread position: 46-628
Cow position: chr6:15305240-15305803 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 23

Conread position: 47-456
Cow position: chr6:8318513-8318093 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 22

Conread position: 47-510
Cow position: chr6:55474902-55475376 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 22

Conread position: 47-621
Cow position: chr6:47304980-47305567 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 22

Conread position: 49-504
Cow position: chr6:456835-457290 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 20

Conread position: 54-508
Cow position: chr6:26728870-26728413 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 118

Conread position: 54-631
Cow position: chr6:323651-323067 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 14

Conread position: 55-583
Cow position: chr6:54867179-54867704 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 14

Conread position: 55-631
Cow position: chr6:36195874-36196437 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 14

Conread position: 58-507
Cow position: chr6:35613764-35613299 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 11

Conread position: 61-631
Cow position: chr6:44078183-44078750 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 6

Conread position: 61-631
Cow position: chr6:68376622-68376080 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 8

Conread position: 63-631
Cow position: chr6:10176630-10176064 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 6

Conread position: 69-461
Cow position: chr6:67044645-67045024 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 5

Conread position: 71-510
Cow position: chr6:19681841-19681404 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 98

Conread position: 81-405
Cow position: chr6:47625273-47624945 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 23

Conread position: 81-434
Cow position: chr6:20231140-20230781 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 88

Conread position: 81-510
Cow position: chr6:4079719-4079277 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 304
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 57, 299

Conread position: 82-569
Cow position: chr6:12500543-12501022 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 221

Conread position: 82-615
Cow position: chr6:60859617-60859079 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 74

Conread position: 82-627
Cow position: chr6:12337671-12338221 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 87

Conread position: 85-624
Cow position: chr6:46557747-46558282 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 84

Conread position: 85-631
Cow position: chr6:19401530-19402080 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 218

Conread position: 90-630
Cow position: chr6:611262-611777 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 7

Conread position: 90-631
Cow position: chr6:15938170-15937617 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 153

Conread position: 91-456
Cow position: chr6:58315742-58316116 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 254
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 79, 118

Conread position: 93-504
Cow position: chr6:31525749-31526161 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 63

Conread position: 94-445
Cow position: chr6:57504462-57504820 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 233
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 73, 103

Conread position: 96-631
Cow position: chr6:47519751-47520289 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 73

Conread position: 98-444
Cow position: chr6:58172890-58173240 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 58

Conread position: 98-629
Cow position: chr6:60057962-60057405 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 5

Conread position: 104-510
Cow position: chr6:54369188-54368783 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 52

Conread position: 105-631
Cow position: chr6:7131162-7130626 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 66

Conread position: 108-442
Cow position: chr6:62479453-62479107 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 61

Conread position: 108-630
Cow position: chr6:34196436-34195928 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 61

Conread position: 109-631
Cow position: chr6:6201161-6201668 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 47

Conread position: 110-508
Cow position: chr6:38218378-38218785 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 211

Conread position: 110-519
Cow position: chr6:57164141-57164558 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 112

Conread position: 113-630
Cow position: chr6:6264363-6264886 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 44

Conread position: 114-402
Cow position: chr6:57411361-57411646 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 210
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 18, 58

Conread position: 114-567
Cow position: chr6:9026215-9026697 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 335
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 20, 259

Conread position: 115-627
Cow position: chr6:21534778-21535271 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 54

Conread position: 120-495
Cow position: chr6:2833151-2832771 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 256
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 90, 49

Conread position: 123-619
Cow position: chr6:50746704-50747223 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 329

Conread position: 123-624
Cow position: chr6:60473861-60474363 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 47

Conread position: 123-630
Cow position: chr6:54365596-54365095 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 46

Conread position: 124-627
Cow position: chr6:48281723-48282226 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 45

Conread position: 127-495
Cow position: chr6:35471795-35471404 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 42

Conread position: 133-590
Cow position: chr6:40713761-40713315 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 12

Conread position: 133-623
Cow position: chr6:61515460-61514971 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 36

Conread position: 134-407
Cow position: chr6:54293849-54294124 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 202
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 75, 37

Conread position: 137-496
Cow position: chr6:64449133-64449484 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 258
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 71, 32

Conread position: 140-631
Cow position: chr6:3952269-3952756 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 28

Conread position: 146-423
Cow position: chr6:53710866-53711149 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 203
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 24, 73

Conread position: 148-486
Cow position: chr6:20329773-20330105 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 244
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 62, 21

Conread position: 148-623
Cow position: chr6:54132571-54133038 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 13

Conread position: 148-631
Cow position: chr6:15242588-15243074 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 21

Conread position: 151-627
Cow position: chr6:38853903-38853425 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 18

Conread position: 153-564
Cow position: chr6:54991235-54990832 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 16

Conread position: 156-383
Cow position: chr6:40138945-40138722 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 13

Conread position: 156-609
Cow position: chr6:26915090-26915541 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 13

Conread position: 156-625
Cow position: chr6:7103475-7103010 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 324
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 46, 14

Conread position: 156-629
Cow position: chr6:41375513-41376003 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 13

Conread position: 156-631
Cow position: chr6:9736879-9736410 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 13

Conread position: 156-631
Cow position: chr6:61113510-61114000 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 13

Conread position: 157-511
Cow position: chr6:20098203-20097837 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 12

Conread position: 159-495
Cow position: chr6:54600131-54600454 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 237
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 251, 49

Conread position: 159-631
Cow position: chr6:13040215-13040688 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 10

Conread position: 159-631
Cow position: chr6:34251512-34251063 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 316
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 108, 11

Conread position: 162-388
Cow position: chr6:39994695-39994462 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 172
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 48, 10

Conread position: 163-442
Cow position: chr6:54885146-54884852 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 214
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 52, 6

Conread position: 163-624
Cow position: chr6:2582641-2583088 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 306
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 47, 36

Conread position: 165-509
Cow position: chr6:7190351-7189999 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 144

Conread position: 168-631
Cow position: chr6:24468621-24468164 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 233

Conread position: 169-397
Cow position: chr6:14201470-14201709 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 168
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 41, 181

Conread position: 169-502
Cow position: chr6:48573110-48572767 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 236
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 41, 30

Conread position: 169-504
Cow position: chr6:130392-130048 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 200

Conread position: 169-504
Cow position: chr6:47327296-47326958 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 231
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 39, 187

Conread position: 169-510
Cow position: chr6:49002952-49002619 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 241
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 98, 117

Conread position: 169-510
Cow position: chr6:60350527-60350171 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 169-624
Cow position: chr6:4383265-4383702 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 98

Conread position: 169-624
Cow position: chr6:16103430-16102964 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 205

Conread position: 169-624
Cow position: chr6:16746112-16746574 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 306
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 46, 227

Conread position: 169-627
Cow position: chr6:60144405-60143968 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 113

Conread position: 169-630
Cow position: chr6:67950731-67951191 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 103

Conread position: 169-631
Cow position: chr6:44194773-44194321 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 212

Conread position: 170-409
Cow position: chr6:56902637-56902883 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 171
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 40, 163

Conread position: 170-410
Cow position: chr6:30826261-30826013 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 179
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 56, 38

Conread position: 170-424
Cow position: chr6:10635950-10636204 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 195
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 172, 218

Conread position: 170-444
Cow position: chr6:49685358-49685640 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 196
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 40, 146

Conread position: 170-484
Cow position: chr6:6995171-6994856 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 208
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 60, 25

Conread position: 170-510
Cow position: chr6:31564560-31564217 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 235
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 40, 26

Conread position: 170-510
Cow position: chr6:66874135-66874472 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 90

Conread position: 170-551
Cow position: chr6:45065233-45064859 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 103

Conread position: 170-623
Cow position: chr6:51581486-51581028 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 213

Conread position: 170-630
Cow position: chr6:53460798-53460337 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 353

Conread position: 170-631
Cow position: chr6:15301044-15300605 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 176

Conread position: 170-631
Cow position: chr6:21869872-21869393 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 117

Conread position: 170-631
Cow position: chr6:36202601-36203056 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 178

Conread position: 170-631
Cow position: chr6:37148970-37149417 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 41

Conread position: 170-631
Cow position: chr6:38440955-38441415 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 102

Conread position: 170-631
Cow position: chr6:54490967-54490511 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 237

Conread position: 171-559
Cow position: chr6:56376571-56376181 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 258
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 99, 11

Conread position: 172-466
Cow position: chr6:21542095-21542400 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 230

Conread position: 172-508
Cow position: chr6:46865824-46865472 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 235
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 32, 243

Conread position: 172-623
Cow position: chr6:56349946-56350401 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 290
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 38, 219

Conread position: 172-631
Cow position: chr6:29239718-29240167 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 316
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 37, 101

Conread position: 173-461
Cow position: chr6:7824539-7824838 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 210
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 73, 37

Conread position: 173-612
Cow position: chr6:38641273-38641710 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 298

Conread position: 173-631
Cow position: chr6:6063503-6063057 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 95

Conread position: 174-447
Cow position: chr6:25773604-25773327 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 205
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 36, 173

Conread position: 174-623
Cow position: chr6:41733404-41733862 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 213

Conread position: 174-626
Cow position: chr6:46860390-46859940 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 179

Conread position: 175-503
Cow position: chr6:38614602-38614926 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 119

Conread position: 175-631
Cow position: chr6:38207717-38207250 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 215

Conread position: 176-404
Cow position: chr6:30786369-30786140 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 170
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 34, 92

Conread position: 176-495
Cow position: chr6:51893734-51893394 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 222
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 34, 255

Conread position: 176-510
Cow position: chr6:23248184-23247845 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 176

Conread position: 177-507
Cow position: chr6:21110749-21111069 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 234
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 31, 96

Conread position: 177-625
Cow position: chr6:54430599-54431065 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 319
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 33, 223

Conread position: 177-631
Cow position: chr6:55282509-55282057 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 132

Conread position: 178-375
Cow position: chr6:52401642-52401846 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 145
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 92, 0

Conread position: 178-386
Cow position: chr6:11789780-11789999 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 30, 135

Conread position: 178-396
Cow position: chr6:1907320-1907549 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 166
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 27, 172

Conread position: 178-434
Cow position: chr6:10254023-10254286 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 192
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 63, 14

Conread position: 178-510
Cow position: chr6:899503-899172 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 47

Conread position: 178-568
Cow position: chr6:415877-416286 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 277
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 87, 15

Conread position: 178-624
Cow position: chr6:2896534-2896969 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 291
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 32, 11

Conread position: 178-631
Cow position: chr6:24110085-24110519 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 295
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 32, 121

Conread position: 178-631
Cow position: chr6:35415740-35415282 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 308
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 71, 53

Conread position: 178-631
Cow position: chr6:35435784-35436222 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 306
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 26, 95

Conread position: 179-392
Cow position: chr6:242596-242813 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 162
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 31, 107

Conread position: 180-435
Cow position: chr6:48344111-48344379 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 197
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 30, 0

Conread position: 180-508
Cow position: chr6:60442202-60442527 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 232
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 81, 122

Conread position: 180-631
Cow position: chr6:8965873-8966323 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 156

Conread position: 183-557
Cow position: chr6:21737096-21736729 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 259
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 27, 115

Conread position: 184-432
Cow position: chr6:61130695-61130434 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 185
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 26, 227

Conread position: 184-624
Cow position: chr6:47574696-47575119 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 33

Conread position: 185-397
Cow position: chr6:15923209-15922991 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 169
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 82, 23

Conread position: 185-481
Cow position: chr6:24961933-24962237 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 162

Conread position: 185-481
Cow position: chr6:57405336-57405033 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 217
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 25, 36

Conread position: 185-558
Cow position: chr6:53651828-53652203 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 213

Conread position: 185-624
Cow position: chr6:53025010-53024583 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 166

Conread position: 185-624
Cow position: chr6:65702613-65702181 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 296
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 25, 158

Conread position: 185-630
Cow position: chr6:62324778-62325226 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 294
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 23, 235

Conread position: 186-419
Cow position: chr6:46400616-46400383 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 165
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 21, 86

Conread position: 186-631
Cow position: chr6:7539362-7539808 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 126

Conread position: 187-563
Cow position: chr6:9452979-9452602 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 20

Conread position: 188-452
Cow position: chr6:6460333-6460605 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 20

Conread position: 190-446
Cow position: chr6:61137158-61137432 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 202
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 27, 144

Conread position: 190-509
Cow position: chr6:28080104-28079794 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 215
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 20, 204

Conread position: 190-568
Cow position: chr6:54864873-54864487 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 273
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 79, 286

Conread position: 190-619
Cow position: chr6:19695600-19696032 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 290
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 77, 145

Conread position: 191-627
Cow position: chr6:6098488-6098018 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 314
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 19, 101

Conread position: 192-631
Cow position: chr6:20157120-20157570 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 229

Conread position: 194-413
Cow position: chr6:48425524-48425296 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 167
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 16, 0

Conread position: 194-623
Cow position: chr6:66131105-66131546 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 209

Conread position: 195-623
Cow position: chr6:58732515-58732073 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 283
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 49, 368

Conread position: 197-559
Cow position: chr6:59069828-59069456 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 179

Conread position: 197-630
Cow position: chr6:21231336-21231746 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 91

Conread position: 198-403
Cow position: chr6:33276840-33277057 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 12, 0

Conread position: 198-446
Cow position: chr6:24223360-24223097 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 185
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 12, 18

Conread position: 198-509
Cow position: chr6:8788236-8787917 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 220
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 12, 187

Conread position: 198-562
Cow position: chr6:63299222-63298865 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 241
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 12, 22

Conread position: 198-622
Cow position: chr6:5114244-5113821 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 24

Conread position: 198-631
Cow position: chr6:10400094-10399673 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 74

Conread position: 200-504
Cow position: chr6:48187777-48187464 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 214
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 67, 194

Conread position: 200-507
Cow position: chr6:28318213-28318515 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 223
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 67, 96

Conread position: 200-620
Cow position: chr6:63720003-63720416 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 317

Conread position: 200-621
Cow position: chr6:12092180-12091761 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 93

Conread position: 200-631
Cow position: chr6:55546356-55545937 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 294
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 60, 24

Conread position: 201-446
Cow position: chr6:53731325-53731581 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 187
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 9, 0

Conread position: 201-456
Cow position: chr6:3545508-3545762 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 177
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 9, 71

Conread position: 201-493
Cow position: chr6:12652010-12652312 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 194
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 9, 0

Conread position: 201-567
Cow position: chr6:16423503-16423882 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 99

Conread position: 201-573
Cow position: chr6:16191471-16191849 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 253
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 9, 18

Conread position: 201-630
Cow position: chr6:6400753-6401199 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 108

Conread position: 202-624
Cow position: chr6:37467734-37467309 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 286
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 8, 122

Conread position: 202-631
Cow position: chr6:21456885-21456442 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 97

Conread position: 204-572
Cow position: chr6:53519816-53519438 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 252
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 6, 98

Conread position: 206-569
Cow position: chr6:47799108-47799469 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 65

Conread position: 208-631
Cow position: chr6:50577332-50577750 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 247

Conread position: 210-624
Cow position: chr6:37246616-37246211 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 279
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 51, 144

Conread position: 211-407
Cow position: chr6:8187704-8187498 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 54, 96

Conread position: 212-499
Cow position: chr6:25008530-25008829 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 205
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 55, 96

Conread position: 218-504
Cow position: chr6:32518051-32517765 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 187
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 144, 53

Conread position: 220-436
Cow position: chr6:18968949-18968733 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 162
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 47, 23

Conread position: 220-442
Cow position: chr6:49604507-49604729 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 154
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 47, 21

Conread position: 220-527
Cow position: chr6:52901065-52901375 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 213
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 47, 35

Conread position: 221-456
Cow position: chr6:9838987-9839239 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 174
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 221-628
Cow position: chr6:8125157-8125562 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 124

Conread position: 223-631
Cow position: chr6:47355651-47356061 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 276
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 43, 152

Conread position: 224-624
Cow position: chr6:65264707-65264323 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 269
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 45, 71

Conread position: 224-631
Cow position: chr6:12668935-12669333 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 276
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 43, 134

Conread position: 225-428
Cow position: chr6:54287909-54288111 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 156
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 94, 40

Conread position: 227-624
Cow position: chr6:11246595-11246996 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 213

Conread position: 235-502
Cow position: chr6:12543094-12542817 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 235-631
Cow position: chr6:18955223-18954857 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 243
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 15, 160

Conread position: 236-631
Cow position: chr6:6965543-6965160 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 14

Conread position: 237-581
Cow position: chr6:48112045-48112381 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 52

Conread position: 237-631
Cow position: chr6:14914398-14913999 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 30

Conread position: 237-631
Cow position: chr6:38609815-38610209 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 26

Conread position: 240-480
Cow position: chr6:12829374-12829134 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 47

Conread position: 241-631
Cow position: chr6:32287489-32287866 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 26

Conread position: 244-631
Cow position: chr6:4559456-4559068 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 263
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 9, 161

Conread position: 245-616
Cow position: chr6:17704671-17705054 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 247
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 5, 279

Conread position: 245-627
Cow position: chr6:19446109-19446484 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 105

Conread position: 249-631
Cow position: chr6:46283145-46282757 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 116

Conread position: 256-607
Cow position: chr6:61168640-61168976 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 256
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 297, 86

Conread position: 257-631
Cow position: chr6:120109-120472 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 61

Conread position: 259-414
Cow position: chr6:58364144-58363985 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 259-495
Cow position: chr6:3081262-3081010 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 182
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 58, 0

Conread position: 259-631
Cow position: chr6:67456581-67456974 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 261
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 61, 161

Conread position: 260-428
Cow position: chr6:55508707-55508535 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 55, 159

Conread position: 260-449
Cow position: chr6:40834600-40834408 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 73, 0

Conread position: 260-487
Cow position: chr6:59108810-59109043 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 168
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 51, 144

Conread position: 260-495
Cow position: chr6:78039-77810 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 164
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 55, 31

Conread position: 260-502
Cow position: chr6:55892635-55892880 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 174
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 43, 159

Conread position: 260-504
Cow position: chr6:29000053-28999824 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 188
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 206, 25

Conread position: 260-508
Cow position: chr6:55763723-55763973 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 173
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 61, 32

Conread position: 260-509
Cow position: chr6:37739055-37739296 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 182
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 58, 143

Conread position: 260-510
Cow position: chr6:51840139-51840399 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 180
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 70, 246

Conread position: 260-514
Cow position: chr6:61608380-61608637 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 141

Conread position: 260-521
Cow position: chr6:47204346-47204607 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 180
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 55, 13

Conread position: 260-541
Cow position: chr6:27815600-27815322 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 201
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 127, 23

Conread position: 260-555
Cow position: chr6:58590147-58590435 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 213
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 68, 80

Conread position: 260-568
Cow position: chr6:1499511-1499821 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 31

Conread position: 260-568
Cow position: chr6:35993450-35993760 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 225
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 55, 111

Conread position: 260-597
Cow position: chr6:57571346-57571679 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 253

Conread position: 260-615
Cow position: chr6:52412727-52413081 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 256
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 66, 132

Conread position: 260-615
Cow position: chr6:54036266-54035921 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 240
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 156, 77

Conread position: 260-622
Cow position: chr6:45388199-45388547 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 248
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 81, 129

Conread position: 260-623
Cow position: chr6:60118019-60118369 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 252
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 56, 13

Conread position: 260-623
Cow position: chr6:60819384-60819742 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 247
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 60, 136

Conread position: 260-624
Cow position: chr6:4692111-4691736 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 249
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 66, 224

Conread position: 260-624
Cow position: chr6:19755204-19754850 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 248
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 75, 62

Conread position: 260-624
Cow position: chr6:60783739-60784099 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 242
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 80, 24

Conread position: 260-625
Cow position: chr6:15243125-15243488 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 138

Conread position: 260-625
Cow position: chr6:21399884-21399525 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 244
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 59, 76

Conread position: 260-630
Cow position: chr6:7128531-7128170 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 29

Conread position: 260-630
Cow position: chr6:15447335-15446958 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 256

Conread position: 260-631
Cow position: chr6:1703687-1704029 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 253
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 81, 110

Conread position: 260-631
Cow position: chr6:9219142-9219498 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 259
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 80, 131

Conread position: 260-631
Cow position: chr6:17313603-17313973 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 120

Conread position: 260-631
Cow position: chr6:19264626-19264266 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 10

Conread position: 260-631
Cow position: chr6:24934757-24934377 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 248
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 55, 143

Conread position: 260-631
Cow position: chr6:38640100-38640466 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 256

Conread position: 260-631
Cow position: chr6:47700016-47700400 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 242
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 260-631
Cow position: chr6:48988306-48988669 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 251
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 59, 139

Conread position: 260-631
Cow position: chr6:53841630-53841268 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 256
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 123, 77

Conread position: 261-449
Cow position: chr6:44984200-44984390 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 54, 15

Conread position: 261-495
Cow position: chr6:60667291-60667519 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 171
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 54, 24

Conread position: 262-621
Cow position: chr6:60850515-60850155 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 248
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 53, 143

Conread position: 262-625
Cow position: chr6:62669745-62670100 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 24

Conread position: 263-509
Cow position: chr6:7173881-7173630 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 174
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 79, 164

Conread position: 263-623
Cow position: chr6:67618083-67617720 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 244
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 52, 137

Conread position: 263-631
Cow position: chr6:62929368-62929733 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 250
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 73, 55

Conread position: 264-554
Cow position: chr6:54573116-54573419 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 213
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 56, 265

Conread position: 264-622
Cow position: chr6:31814864-31814520 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 239
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 55, 76

Conread position: 264-631
Cow position: chr6:50467008-50467373 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 251
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 53, 117

Conread position: 265-476
Cow position: chr6:37376643-37376427 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 160
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 76, 130

Conread position: 265-504
Cow position: chr6:15022684-15022432 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 183
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 60, 36

Conread position: 265-631
Cow position: chr6:58370623-58370982 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 255
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 14, 219

Conread position: 267-507
Cow position: chr6:47640557-47640314 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 134

Conread position: 269-495
Cow position: chr6:20206154-20206381 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 161
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 45, 23

Conread position: 269-552
Cow position: chr6:50975936-50976207 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 207
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 144, 72

Conread position: 269-624
Cow position: chr6:19045503-19045856 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 238
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 32, 14

Conread position: 269-630
Cow position: chr6:10225761-10225416 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 251
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 72, 112

Conread position: 269-631
Cow position: chr6:16266597-16266964 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 248
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 50, 143

Conread position: 269-631
Cow position: chr6:19996499-19996850 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 258
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 51, 16

Conread position: 269-631
Cow position: chr6:23402111-23401760 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 250
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 72, 49

Conread position: 270-406
Cow position: chr6:61571906-61572043 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 130

Conread position: 270-623
Cow position: chr6:16261665-16262008 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 239
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 49, 21

Conread position: 271-631
Cow position: chr6:25615222-25614855 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 27

Conread position: 273-631
Cow position: chr6:22850363-22850017 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 240
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 42, 72

Conread position: 274-510
Cow position: chr6:12845262-12845496 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 176
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 57, 127

Conread position: 274-631
Cow position: chr6:54854132-54854485 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 248
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 41, 79

Conread position: 275-546
Cow position: chr6:58597620-58597352 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 85

Conread position: 275-631
Cow position: chr6:33206632-33206964 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 241
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 99, 11

Conread position: 276-631
Cow position: chr6:55209441-55209795 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 243
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 43, 114

Conread position: 278-631
Cow position: chr6:22985972-22985627 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 252
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 31, 233

Conread position: 279-599
Cow position: chr6:61524310-61524001 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 17

Conread position: 279-624
Cow position: chr6:10039609-10039954 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 232
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 41, 132

Conread position: 280-624
Cow position: chr6:51526380-51526719 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 222
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 35, 128

Conread position: 281-627
Cow position: chr6:59603317-59602984 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 58

Conread position: 282-626
Cow position: chr6:54208248-54207902 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 240
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 37, 26

Conread position: 286-631
Cow position: chr6:59718691-59719046 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 236
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 55, 181

Conread position: 289-623
Cow position: chr6:43345548-43345213 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 230
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 28, 117

Conread position: 289-630
Cow position: chr6:1429537-1429868 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 237
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 46, 29

Conread position: 292-619
Cow position: chr6:27240105-27239781 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 230
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 48, 125

Conread position: 294-625
Cow position: chr6:13564987-13565315 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 226
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 47, 155

Conread position: 295-510
Cow position: chr6:66375426-66375212 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 164
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 46, 100

Conread position: 295-622
Cow position: chr6:7119706-7119404 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 238
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 120, 44

Conread position: 297-631
Cow position: chr6:17549075-17548733 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 233
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 44, 303

Conread position: 299-627
Cow position: chr6:143460-143147 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 233
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 35, 19

Conread position: 300-499
Cow position: chr6:17245697-17245503 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 41, 8

Conread position: 300-502
Cow position: chr6:10487496-10487701 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 139
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 301-495
Cow position: chr6:60673479-60673671 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 147
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 101, 36

Conread position: 301-631
Cow position: chr6:60274098-60273776 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 38

Conread position: 302-627
Cow position: chr6:37332018-37332342 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 64

Conread position: 305-567
Cow position: chr6:51968981-51969250 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 188
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 36, 161

Conread position: 307-503
Cow position: chr6:20929600-20929399 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 74, 0

Conread position: 309-585
Cow position: chr6:36284163-36284441 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 188
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 104, 13

Conread position: 312-568
Cow position: chr6:23466108-23465860 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 192
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 29, 82

Conread position: 312-572
Cow position: chr6:2623703-2623951 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 177
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 29, 88

Conread position: 313-597
Cow position: chr6:67281819-67282092 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 191
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 28, 73

Conread position: 313-631
Cow position: chr6:5330336-5330649 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 219
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 7, 26

Conread position: 313-631
Cow position: chr6:8599927-8600240 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 219
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 20, 76

Conread position: 313-631
Cow position: chr6:33509712-33510024 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 212
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 28, 95

Conread position: 315-631
Cow position: chr6:694223-693910 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 47

Conread position: 317-631
Cow position: chr6:17068723-17068420 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 197

Conread position: 318-487
Cow position: chr6:36493622-36493443 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 144
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 23, 166

Conread position: 319-555
Cow position: chr6:29248419-29248639 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 173
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 22, 72

Conread position: 322-612
Cow position: chr6:67643760-67643472 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 207
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 20, 94

Conread position: 322-631
Cow position: chr6:22215537-22215227 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 201
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 14, 63

Conread position: 322-631
Cow position: chr6:50504388-50504691 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 224
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 39, 9

Conread position: 323-487
Cow position: chr6:67615499-67615332 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 135
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 18, 74

Conread position: 323-629
Cow position: chr6:48468937-48469240 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 214
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 11, 51

Conread position: 324-598
Cow position: chr6:31078937-31078666 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 198
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 119, 81

Conread position: 324-631
Cow position: chr6:62437345-62437652 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 206
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 10, 58

Conread position: 325-491
Cow position: chr6:7170413-7170246 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 16, 75

Conread position: 325-509
Cow position: chr6:33929616-33929427 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 135
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 15, 78

Conread position: 325-573
Cow position: chr6:60516762-60517003 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 182
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 18, 47

Conread position: 325-622
Cow position: chr6:37395474-37395177 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 214
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 16, 189

Conread position: 325-626
Cow position: chr6:6724437-6724739 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 196
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 16, 148

Conread position: 325-631
Cow position: chr6:9302782-9302488 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 222
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 8, 84

Conread position: 325-631
Cow position: chr6:16288118-16287832 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 213
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 16, 74

Conread position: 326-625
Cow position: chr6:18118117-18117822 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 136

Conread position: 329-510
Cow position: chr6:59770165-59770345 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 12, 67

Conread position: 336-509
Cow position: chr6:68652406-68652231 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 52, 66

Conread position: 339-631
Cow position: chr6:5845222-5844933 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 198
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 77, 58

Conread position: 339-631
Cow position: chr6:6195161-6194867 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 197
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 55, 64

Conread position: 339-631
Cow position: chr6:24536592-24536291 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 209
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 58, 182

Conread position: 339-631
Cow position: chr6:60468187-60468466 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 212
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 56, 77

Conread position: 340-503
Cow position: chr6:69500415-69500576 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 116
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 74, 0

Conread position: 340-622
Cow position: chr6:68816117-68816396 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 206
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 50, 83

Conread position: 341-631
Cow position: chr6:23353505-23353791 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 204
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 164, 68

Conread position: 342-625
Cow position: chr6:2584894-2585170 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 191
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 73, 63

Conread position: 343-631
Cow position: chr6:3350973-3351263 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 179

Conread position: 344-510
Cow position: chr6:32853141-32853308 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 136
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 49, 73

Conread position: 344-510
Cow position: chr6:47306183-47306026 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 344-559
Cow position: chr6:1422440-1422650 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 25, 162

Conread position: 344-624
Cow position: chr6:55417572-55417305 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 187
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 86, 54

Conread position: 344-631
Cow position: chr6:2078865-2078581 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 49

Conread position: 344-631
Cow position: chr6:28973080-28972798 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 185
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 168, 57

Conread position: 345-624
Cow position: chr6:51530230-51529962 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 192
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 21, 58

Conread position: 346-568
Cow position: chr6:55535792-55535579 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 156
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 67, 52

Conread position: 350-542
Cow position: chr6:32517139-32516955 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 145
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 175, 39

Conread position: 351-562
Cow position: chr6:66570399-66570608 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 150
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 46, 165

Conread position: 352-631
Cow position: chr6:67728333-67728613 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 185
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 36, 57

Conread position: 354-619
Cow position: chr6:34119390-34119140 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 194
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 32, 42

Conread position: 356-631
Cow position: chr6:60266215-60265933 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 202
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 38, 45

Conread position: 357-552
Cow position: chr6:19259377-19259183 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 45, 157

Conread position: 360-503
Cow position: chr6:12197148-12197294 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 34, 43

Conread position: 360-631
Cow position: chr6:49437303-49437566 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 196
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 53, 34

Conread position: 361-612
Cow position: chr6:36921003-36920759 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 187
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 29, 18

Conread position: 363-629
Cow position: chr6:63065798-63066070 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 204
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 18, 32

Conread position: 363-631
Cow position: chr6:41015003-41014739 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 176
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 364-631
Cow position: chr6:18904078-18903802 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 193
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 42, 30

Conread position: 364-631
Cow position: chr6:48097627-48097368 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 205
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 33, 43

Conread position: 364-631
Cow position: chr6:62056587-62056846 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 191
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 49, 149

Conread position: 366-622
Cow position: chr6:26155128-26155373 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 176
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 28, 0

Conread position: 366-631
Cow position: chr6:30023870-30024112 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 197
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 22, 0

Conread position: 368-561
Cow position: chr6:53089986-53090174 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 152
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 28, 49

Conread position: 368-631
Cow position: chr6:21293518-21293263 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 191
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 45, 26

Conread position: 370-631
Cow position: chr6:13653331-13653581 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 185
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 27, 100

Conread position: 370-631
Cow position: chr6:53546016-53546264 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 189
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 43, 23

Conread position: 372-569
Cow position: chr6:4702842-4702643 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 39, 22

Conread position: 372-631
Cow position: chr6:58725358-58725602 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 191
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 28, 0

Conread position: 378-629
Cow position: chr6:32453375-32453622 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 176
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 37, 16

Conread position: 384-623
Cow position: chr6:48379621-48379384 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 164
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 31, 135

Conread position: 386-615
Cow position: chr6:58459718-58459936 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 160
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 29, 13

Conread position: 386-631
Cow position: chr6:29775623-29775853 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 180
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 162, 20

Conread position: 386-631
Cow position: chr6:42034768-42035005 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 178
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 30, 19

Conread position: 388-631
Cow position: chr6:67069818-67069580 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 168
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 46

Conread position: 389-627
Cow position: chr6:6168693-6168918 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 171
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 92, 10

Conread position: 395-631
Cow position: chr6:57079428-57079661 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 164
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 20, 10

Conread position: 398-618
Cow position: chr6:1871187-1870975 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 152
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 398-631
Cow position: chr6:1941823-1941599 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 166
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 83, 72

Conread position: 399-631
Cow position: chr6:42483425-42483650 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 156
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 401-631
Cow position: chr6:21470417-21470197 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 162
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 110, 0

Conread position: 401-631
Cow position: chr6:61109799-61110017 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 164
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 88, 0

Conread position: 408-630
Cow position: chr6:12623532-12623743 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 163
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 7, 86

Conread position: 408-631
Cow position: chr6:12761298-12761515 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 163
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 121, 81

Conread position: 413-630
Cow position: chr6:60850724-60850933 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 103, 0

Conread position: 414-631
Cow position: chr6:1866757-1866966 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 134, 15

Conread position: 417-630
Cow position: chr6:51933582-51933773 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 158
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 418-631
Cow position: chr6:66259758-66259972 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 142
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 101, 0

Conread position: 419-564
Cow position: chr6:54349724-54349864 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 420-631
Cow position: chr6:16090934-16091132 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 92, 0

Conread position: 420-631
Cow position: chr6:23938091-23938286 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 155
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 93, 0

Conread position: 422-631
Cow position: chr6:5601735-5601935 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 152
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 167, 41

Conread position: 427-631
Cow position: chr6:3936822-3937022 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 155
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 121, 29

Conread position: 427-631
Cow position: chr6:21083503-21083306 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 151
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 86, 0

Conread position: 429-631
Cow position: chr6:41657307-41657500 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 142
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 84, 0

Conread position: 434-631
Cow position: chr6:21350988-21350796 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 147
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 134, 58

Conread position: 437-625
Cow position: chr6:40682615-40682439 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 445-624
Cow position: chr6:32006399-32006228 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 67, 0

Conread position: 451-631
Cow position: chr6:34423397-34423225 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 60, 0

Conread position: 453-631
Cow position: chr6:38032920-38033093 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 15, 60

Conread position: 462-630
Cow position: chr6:2014201-2014359 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 40, 0

Show alignments to all cow chromosomes.