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Cow genome map

           
Conread name:
           
OvaP-UMC-pputal2-003-f07
        

               
Conread position:
               
1-391
               

               
Cow position:
               
chr7:34715846-34716252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 68
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr7:42431433-42431834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 68
               

               
Conread position:
               
1-396
               

               
Cow position:
               
chr7:34669719-34670124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
28, 74
               

               
Conread position:
               
1-401
               

               
Cow position:
               
chr7:32824642-32824239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
256, 63
               

               
Conread position:
               
1-427
               

               
Cow position:
               
chr7:68867716-68868151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 68
               

               
Conread position:
               
1-442
               

               
Cow position:
               
chr7:12213007-12212544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 132
               

               
Conread position:
               
1-442
               

               
Cow position:
               
chr7:21572896-21573348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 38
               

               
Conread position:
               
1-442
               

               
Cow position:
               
chr7:54089811-54090264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 33
               

               
Conread position:
               
1-493
               

               
Cow position:
               
chr7:57911216-57911717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 67
               

               
Conread position:
               
1-495
               

               
Cow position:
               
chr7:40318549-40319036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 67
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr7:43234849-43234330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 73
               

               
Conread position:
               
1-503
               

               
Cow position:
               
chr7:25703615-25703109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
41, 77
               

               
Conread position:
               
1-509
               

               
Cow position:
               
chr7:7107199-7106662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 74
               

               
Conread position:
               
1-509
               

               
Cow position:
               
chr7:23257249-23256733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 76
               

               
Conread position:
               
1-510
               

               
Cow position:
               
chr7:1261630-1262152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 72
               

               
Conread position:
               
1-510
               

               
Cow position:
               
chr7:45955507-45956052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 241
               

               
Conread position:
               
1-514
               

               
Cow position:
               
chr7:19400070-19399550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
1-535
               

               
Cow position:
               
chr7:58841250-58841796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 78
               

               
Conread position:
               
1-557
               

               
Cow position:
               
chr7:61824238-61823686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 58
               

               
Conread position:
               
1-565
               

               
Cow position:
               
chr7:23646216-23646787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
457
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 68
               

               
Conread position:
               
1-618
               

               
Cow position:
               
chr7:46823277-46823897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 165
               

               
Conread position:
               
1-627
               

               
Cow position:
               
chr7:43907820-43908428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
453
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 68
               

               
Conread position:
               
1-629
               

               
Cow position:
               
chr7:41872468-41871872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
642
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 52
               

               
Conread position:
               
1-631
               

               
Cow position:
               
chr7:19466653-19466021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
658
               

               
Alignm identity:
               
463
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 68
               

               
Conread position:
               
1-631
               

               
Cow position:
               
chr7:34553853-34554483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
662
               

               
Alignm identity:
               
477
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 72
               

               
Conread position:
               
1-631
               

               
Cow position:
               
chr7:47775480-47776101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
637
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
266, 65
               

               
Conread position:
               
1-631
               

               
Cow position:
               
chr7:61551507-61552176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
679
               

               
Alignm identity:
               
467
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
1-631
               

               
Cow position:
               
chr7:61790747-61790116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
647
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 68
               

               
Conread position:
               
1-631
               

               
Cow position:
               
chr7:66894931-66894303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
644
               

               
Alignm identity:
               
464
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 41
               

               
Conread position:
               
2-408
               

               
Cow position:
               
chr7:12659386-12658972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 52
               

               
Conread position:
               
2-441
               

               
Cow position:
               
chr7:39401562-39402013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 70
               

               
Conread position:
               
2-452
               

               
Cow position:
               
chr7:205372-205804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 68
               

               
Conread position:
               
2-452
               

               
Cow position:
               
chr7:24778501-24778054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 9
               

               
Conread position:
               
2-455
               

               
Cow position:
               
chr7:69054175-69054615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
159, 32
               

               
Conread position:
               
2-456
               

               
Cow position:
               
chr7:12384755-12385215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 52
               

               
Conread position:
               
2-456
               

               
Cow position:
               
chr7:24932785-24932343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
242, 66
               

               
Conread position:
               
2-456
               

               
Cow position:
               
chr7:34017696-34018155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 73
               

               
Conread position:
               
2-495
               

               
Cow position:
               
chr7:8785576-8786061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
259, 67
               

               
Conread position:
               
2-495
               

               
Cow position:
               
chr7:22624487-22623994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 68
               

               
Conread position:
               
2-504
               

               
Cow position:
               
chr7:18857922-18858455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 73
               

               
Conread position:
               
2-504
               

               
Cow position:
               
chr7:19267760-19267253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 66
               

               
Conread position:
               
2-510
               

               
Cow position:
               
chr7:9193632-9193114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 67
               

               
Conread position:
               
2-510
               

               
Cow position:
               
chr7:11870223-11869717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 73
               

               
Conread position:
               
2-547
               

               
Cow position:
               
chr7:58170341-58170895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 113
               

               
Conread position:
               
2-568
               

               
Cow position:
               
chr7:38081769-38082333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
442
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 67
               

               
Conread position:
               
2-569
               

               
Cow position:
               
chr7:25512512-25511948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 68
               

               
Conread position:
               
2-569
               

               
Cow position:
               
chr7:41328411-41327858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 67
               

               
Conread position:
               
2-590
               

               
Cow position:
               
chr7:45157743-45158326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
325, 32
               

               
Conread position:
               
2-604
               

               
Cow position:
               
chr7:9146249-9146859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 75
               

               
Conread position:
               
2-612
               

               
Cow position:
               
chr7:36717853-36717251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 68
               

               
Conread position:
               
2-621
               

               
Cow position:
               
chr7:32316511-32317120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
634
               

               
Alignm identity:
               
449
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 9
               

               
Conread position:
               
2-621
               

               
Cow position:
               
chr7:47547004-47547632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
644
               

               
Alignm identity:
               
460
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
234, 67
               

               
Conread position:
               
2-623
               

               
Cow position:
               
chr7:37568638-37569281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
652
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 51
               

               
Conread position:
               
2-623
               

               
Cow position:
               
chr7:53202345-53202944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
628
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
265, 67
               

               
Conread position:
               
2-624
               

               
Cow position:
               
chr7:29301142-29300546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
637
               

               
Alignm identity:
               
476
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 67
               

               
Conread position:
               
2-624
               

               
Cow position:
               
chr7:34428170-34428809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
651
               

               
Alignm identity:
               
464
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 66
               

               
Conread position:
               
2-625
               

               
Cow position:
               
chr7:64229291-64228658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
642
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 67
               

               
Conread position:
               
2-630
               

               
Cow position:
               
chr7:54712031-54712652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
644
               

               
Alignm identity:
               
475
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 50
               

               
Conread position:
               
2-631
               

               
Cow position:
               
chr7:1721357-1720728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
643
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 67
               

               
Conread position:
               
2-631
               

               
Cow position:
               
chr7:8877494-8878121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
647
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 52
               

               
Conread position:
               
2-631
               

               
Cow position:
               
chr7:11783809-11783188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
637
               

               
Alignm identity:
               
459
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
319, 67
               

               
Conread position:
               
2-631
               

               
Cow position:
               
chr7:18388787-18388157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
645
               

               
Alignm identity:
               
461
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 67
               

               
Conread position:
               
2-631
               

               
Cow position:
               
chr7:22357879-22357251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
650
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 67
               

               
Conread position:
               
2-631
               

               
Cow position:
               
chr7:34433667-34433042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
641
               

               
Alignm identity:
               
461
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 10
               

               
Conread position:
               
2-631
               

               
Cow position:
               
chr7:36247720-36248329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
642
               

               
Alignm identity:
               
442
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
314, 67
               

               
Conread position:
               
2-631
               

               
Cow position:
               
chr7:43109915-43109300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
642
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 67
               

               
Conread position:
               
2-631
               

               
Cow position:
               
chr7:51019405-51020017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
637
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 67
               

               
Conread position:
               
2-631
               

               
Cow position:
               
chr7:62602807-62603419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
641
               

               
Alignm identity:
               
453
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
265, 68
               

               
Conread position:
               
3-389
               

               
Cow position:
               
chr7:24797079-24796689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 40
               

               
Conread position:
               
3-405
               

               
Cow position:
               
chr7:23619474-23619066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 66
               

               
Conread position:
               
3-407
               

               
Cow position:
               
chr7:53034708-53034299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 72
               

               
Conread position:
               
3-427
               

               
Cow position:
               
chr7:35111185-35111607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 66
               

               
Conread position:
               
3-445
               

               
Cow position:
               
chr7:53268804-53269261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 66
               

               
Conread position:
               
3-478
               

               
Cow position:
               
chr7:30307340-30307834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 165
               

               
Conread position:
               
3-493
               

               
Cow position:
               
chr7:39154716-39155220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 114
               

               
Conread position:
               
3-500
               

               
Cow position:
               
chr7:45592644-45593152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 72
               

               
Conread position:
               
3-509
               

               
Cow position:
               
chr7:14631987-14632487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 67
               

               
Conread position:
               
3-534
               

               
Cow position:
               
chr7:45927540-45927021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 66
               

               
Conread position:
               
3-556
               

               
Cow position:
               
chr7:39325371-39325889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 65
               

               
Conread position:
               
3-559
               

               
Cow position:
               
chr7:44597089-44596536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 70
               

               
Conread position:
               
3-560
               

               
Cow position:
               
chr7:67819728-67820283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 71
               

               
Conread position:
               
3-563
               

               
Cow position:
               
chr7:58362542-58363101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 160
               

               
Conread position:
               
3-568
               

               
Cow position:
               
chr7:64364915-64364353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 44
               

               
Conread position:
               
3-618
               

               
Cow position:
               
chr7:48667036-48667627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
628
               

               
Alignm identity:
               
465
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 66
               

               
Conread position:
               
3-623
               

               
Cow position:
               
chr7:3336929-3336332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
629
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 68
               

               
Conread position:
               
3-624
               

               
Cow position:
               
chr7:18544764-18544160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
467
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 39
               

               
Conread position:
               
3-624
               

               
Cow position:
               
chr7:27991065-27990448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
633
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 14
               

               
Conread position:
               
3-624
               

               
Cow position:
               
chr7:58302335-58301710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
487
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 66
               

               
Conread position:
               
3-631
               

               
Cow position:
               
chr7:4452212-4452841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
645
               

               
Alignm identity:
               
476
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 66
               

               
Conread position:
               
3-631
               

               
Cow position:
               
chr7:20534486-20535109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
643
               

               
Alignm identity:
               
487
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 71
               

               
Conread position:
               
3-631
               

               
Cow position:
               
chr7:23206023-23205391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
646
               

               
Alignm identity:
               
478
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 68
               

               
Conread position:
               
3-631
               

               
Cow position:
               
chr7:25415009-25415634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
642
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 66
               

               
Conread position:
               
3-631
               

               
Cow position:
               
chr7:26838264-26838889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
644
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 66
               

               
Conread position:
               
3-631
               

               
Cow position:
               
chr7:31171337-31170722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
644
               

               
Alignm identity:
               
482
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 65
               

               
Conread position:
               
3-631
               

               
Cow position:
               
chr7:39149551-39150190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
650
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 66
               

               
Conread position:
               
3-631
               

               
Cow position:
               
chr7:46857344-46856731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
482
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 66
               

               
Conread position:
               
3-631
               

               
Cow position:
               
chr7:48020035-48020662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
651
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 22
               

               
Conread position:
               
3-631
               

               
Cow position:
               
chr7:49750749-49751366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
646
               

               
Alignm identity:
               
485
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 51
               

               
Conread position:
               
4-474
               

               
Cow position:
               
chr7:10122323-10122785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 12
               

               
Conread position:
               
4-496
               

               
Cow position:
               
chr7:4418852-4418350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 68
               

               
Conread position:
               
4-504
               

               
Cow position:
               
chr7:53698306-53697790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 65
               

               
Conread position:
               
4-559
               

               
Cow position:
               
chr7:20177087-20176543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 61
               

               
Conread position:
               
4-622
               

               
Cow position:
               
chr7:33068687-33068080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
633
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 12
               

               
Conread position:
               
4-624
               

               
Cow position:
               
chr7:23664483-23663867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
637
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 55
               

               
Conread position:
               
5-384
               

               
Cow position:
               
chr7:53992314-53992697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 64
               

               
Conread position:
               
5-392
               

               
Cow position:
               
chr7:12994772-12995165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 7
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr7:56887159-56886749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 65
               

               
Conread position:
               
5-424
               

               
Cow position:
               
chr7:62553036-62553472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 23
               

               
Conread position:
               
5-449
               

               
Cow position:
               
chr7:46148490-46148921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 64
               

               
Conread position:
               
5-456
               

               
Cow position:
               
chr7:39042211-39042667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 72
               

               
Conread position:
               
5-465
               

               
Cow position:
               
chr7:61818323-61817859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 166
               

               
Conread position:
               
5-478
               

               
Cow position:
               
chr7:24990895-24991358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 64
               

               
Conread position:
               
5-495
               

               
Cow position:
               
chr7:39167078-39167571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 37
               

               
Conread position:
               
5-496
               

               
Cow position:
               
chr7:32240247-32240720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 64
               

               
Conread position:
               
5-500
               

               
Cow position:
               
chr7:62193181-62193679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
260, 49
               

               
Conread position:
               
5-504
               

               
Cow position:
               
chr7:6057741-6058245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 65
               

               
Conread position:
               
5-509
               

               
Cow position:
               
chr7:39929886-39930406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 78
               

               
Conread position:
               
5-535
               

               
Cow position:
               
chr7:48243289-48243816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 64
               

               
Conread position:
               
5-542
               

               
Cow position:
               
chr7:40264072-40263507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 11
               

               
Conread position:
               
5-548
               

               
Cow position:
               
chr7:26632198-26631655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 64
               

               
Conread position:
               
5-554
               

               
Cow position:
               
chr7:6041618-6042134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 37
               

               
Conread position:
               
5-562
               

               
Cow position:
               
chr7:40074305-40074854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 64
               

               
Conread position:
               
5-597
               

               
Cow position:
               
chr7:68170994-68170390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
617
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 64
               

               
Conread position:
               
5-599
               

               
Cow position:
               
chr7:39903716-39904295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 64
               

               
Conread position:
               
5-611
               

               
Cow position:
               
chr7:26737705-26737124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 64
               

               
Conread position:
               
5-622
               

               
Cow position:
               
chr7:40953250-40952617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
646
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 20
               

               
Conread position:
               
5-626
               

               
Cow position:
               
chr7:30156323-30155715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
644
               

               
Alignm identity:
               
442
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
256, 64
               

               
Conread position:
               
5-630
               

               
Cow position:
               
chr7:23457186-23456588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
636
               

               
Alignm identity:
               
459
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 57
               

               
Conread position:
               
5-630
               

               
Cow position:
               
chr7:40566692-40567292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
636
               

               
Alignm identity:
               
473
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 37
               

               
Conread position:
               
5-631
               

               
Cow position:
               
chr7:32894640-32894002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
648
               

               
Alignm identity:
               
479
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 47
               

               
Conread position:
               
5-631
               

               
Cow position:
               
chr7:53786370-53785752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
657
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 64
               

               
Conread position:
               
6-429
               

               
Cow position:
               
chr7:35652463-35652030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 63
               

               
Conread position:
               
6-461
               

               
Cow position:
               
chr7:67849962-67850431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 62
               

               
Conread position:
               
6-573
               

               
Cow position:
               
chr7:28916693-28917271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
449
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 36
               

               
Conread position:
               
6-573
               

               
Cow position:
               
chr7:36569476-36570043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 63
               

               
Conread position:
               
6-627
               

               
Cow position:
               
chr7:4130183-4129554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
646
               

               
Alignm identity:
               
464
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 67
               

               
Conread position:
               
6-627
               

               
Cow position:
               
chr7:53053778-53053172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
636
               

               
Alignm identity:
               
474
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 63
               

               
Conread position:
               
6-631
               

               
Cow position:
               
chr7:23761581-23762204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
650
               

               
Alignm identity:
               
453
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 63
               

               
Conread position:
               
6-631
               

               
Cow position:
               
chr7:30276348-30276975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
644
               

               
Alignm identity:
               
478
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 24
               

               
Conread position:
               
6-631
               

               
Cow position:
               
chr7:33697585-33698190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
635
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 68
               

               
Conread position:
               
6-631
               

               
Cow position:
               
chr7:36664943-36665564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
641
               

               
Alignm identity:
               
489
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 6
               

               
Conread position:
               
7-377
               

               
Cow position:
               
chr7:58614423-58614783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 52
               

               
Conread position:
               
7-383
               

               
Cow position:
               
chr7:4139106-4138733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 62
               

               
Conread position:
               
7-412
               

               
Cow position:
               
chr7:23099426-23099018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 47
               

               
Conread position:
               
7-446
               

               
Cow position:
               
chr7:26771484-26771930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 62
               

               
Conread position:
               
7-542
               

               
Cow position:
               
chr7:65121972-65122483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 62
               

               
Conread position:
               
7-552
               

               
Cow position:
               
chr7:53772693-53772155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 63
               

               
Conread position:
               
7-568
               

               
Cow position:
               
chr7:62793398-62793976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
453
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 62
               

               
Conread position:
               
7-569
               

               
Cow position:
               
chr7:14766527-14765951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 62
               

               
Conread position:
               
7-631
               

               
Cow position:
               
chr7:39939354-39939975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 62
               

               
Conread position:
               
8-470
               

               
Cow position:
               
chr7:65977812-65978276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 155
               

               
Conread position:
               
8-491
               

               
Cow position:
               
chr7:14542436-14541965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
259, 61
               

               
Conread position:
               
8-504
               

               
Cow position:
               
chr7:40121065-40121589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 62
               

               
Conread position:
               
8-627
               

               
Cow position:
               
chr7:63749850-63749249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
636
               

               
Alignm identity:
               
458
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 61
               

               
Conread position:
               
8-631
               

               
Cow position:
               
chr7:32283531-32284161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
642
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 61
               

               
Conread position:
               
9-568
               

               
Cow position:
               
chr7:57259413-57258848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 60
               

               
Conread position:
               
9-631
               

               
Cow position:
               
chr7:27079256-27079863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
633
               

               
Alignm identity:
               
475
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 60
               

               
Conread position:
               
10-558
               

               
Cow position:
               
chr7:32711362-32710818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 55
               

               
Conread position:
               
10-631
               

               
Cow position:
               
chr7:15569664-15570274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
474
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 60
               

               
Conread position:
               
10-631
               

               
Cow position:
               
chr7:60483806-60483195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
457
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 59
               

               
Conread position:
               
11-622
               

               
Cow position:
               
chr7:25083311-25083913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
442
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 58
               

               
Conread position:
               
14-548
               

               
Cow position:
               
chr7:37361513-37362033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 55
               

               
Conread position:
               
14-566
               

               
Cow position:
               
chr7:12408634-12408063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 55
               

               
Conread position:
               
16-438
               

               
Cow position:
               
chr7:39529358-39528940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
249, 52
               

               
Conread position:
               
16-597
               

               
Cow position:
               
chr7:29280394-29279817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 52
               

               
Conread position:
               
17-631
               

               
Cow position:
               
chr7:25860571-25859965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 37
               

               
Conread position:
               
18-512
               

               
Cow position:
               
chr7:1321263-1320772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 41
               

               
Conread position:
               
18-627
               

               
Cow position:
               
chr7:44454640-44454034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
624
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
252, 51
               

               
Conread position:
               
18-631
               

               
Cow position:
               
chr7:59688162-59688773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 52
               

               
Conread position:
               
19-631
               

               
Cow position:
               
chr7:23569114-23568491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
636
               

               
Alignm identity:
               
465
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 50
               

               
Conread position:
               
21-624
               

               
Cow position:
               
chr7:49106567-49105973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
615
               

               
Alignm identity:
               
459
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 48
               

               
Conread position:
               
24-631
               

               
Cow position:
               
chr7:43710851-43711449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 41
               

               
Conread position:
               
26-503
               

               
Cow position:
               
chr7:2923275-2923764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 43
               

               
Conread position:
               
26-630
               

               
Cow position:
               
chr7:56820947-56820352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
622
               

               
Alignm identity:
               
468
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 46
               

               
Conread position:
               
29-387
               

               
Cow position:
               
chr7:37718192-37718542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
29-622
               

               
Cow position:
               
chr7:48358655-48359224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
602
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 34
               

               
Conread position:
               
33-552
               

               
Cow position:
               
chr7:19982193-19981686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 36
               

               
Conread position:
               
34-455
               

               
Cow position:
               
chr7:34979010-34979448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 35
               

               
Conread position:
               
34-627
               

               
Cow position:
               
chr7:53807169-53806576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
617
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 36
               

               
Conread position:
               
35-631
               

               
Cow position:
               
chr7:14520395-14519805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 34
               

               
Conread position:
               
35-631
               

               
Cow position:
               
chr7:35286976-35286409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
32, 138
               

               
Conread position:
               
39-631
               

               
Cow position:
               
chr7:10373820-10373217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
617
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 31
               

               
Conread position:
               
41-380
               

               
Cow position:
               
chr7:10449136-10448787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
172, 129
               

               
Conread position:
               
41-624
               

               
Cow position:
               
chr7:28324299-28324859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 28
               

               
Conread position:
               
42-392
               

               
Cow position:
               
chr7:61128868-61129227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 27
               

               
Conread position:
               
44-631
               

               
Cow position:
               
chr7:20968083-20968661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
607
               

               
Alignm identity:
               
449
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 25
               

               
Conread position:
               
47-376
               

               
Cow position:
               
chr7:27136146-27136491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 21
               

               
Conread position:
               
47-403
               

               
Cow position:
               
chr7:34198979-34199345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 22
               

               
Conread position:
               
47-435
               

               
Cow position:
               
chr7:34004022-34004398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 22
               

               
Conread position:
               
47-450
               

               
Cow position:
               
chr7:31204866-31204455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 21
               

               
Conread position:
               
47-510
               

               
Cow position:
               
chr7:18964582-18965032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 22
               

               
Conread position:
               
47-596
               

               
Cow position:
               
chr7:2172411-2172954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 22
               

               
Conread position:
               
47-619
               

               
Cow position:
               
chr7:28583903-28584499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
603
               

               
Alignm identity:
               
449
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 22
               

               
Conread position:
               
50-622
               

               
Cow position:
               
chr7:4583077-4582503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 15
               

               
Conread position:
               
53-561
               

               
Cow position:
               
chr7:52785134-52784632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 16
               

               
Conread position:
               
53-625
               

               
Cow position:
               
chr7:31094681-31094101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 15
               

               
Conread position:
               
56-631
               

               
Cow position:
               
chr7:35275405-35274849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 12
               

               
Conread position:
               
58-510
               

               
Cow position:
               
chr7:2896427-2896883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 11
               

               
Conread position:
               
59-631
               

               
Cow position:
               
chr7:30769042-30768476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 9
               

               
Conread position:
               
60-514
               

               
Cow position:
               
chr7:27509385-27509842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 10
               

               
Conread position:
               
61-481
               

               
Cow position:
               
chr7:47381978-47382401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 7
               

               
Conread position:
               
61-509
               

               
Cow position:
               
chr7:10099670-10099240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
150, 100
               

               
Conread position:
               
61-509
               

               
Cow position:
               
chr7:42245044-42244579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 8
               

               
Conread position:
               
61-630
               

               
Cow position:
               
chr7:24851319-24850766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
192, 9
               

               
Conread position:
               
70-429
               

               
Cow position:
               
chr7:28089917-28090276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 99
               

               
Conread position:
               
71-631
               

               
Cow position:
               
chr7:18508849-18508308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 63
               

               
Conread position:
               
71-631
               

               
Cow position:
               
chr7:39169579-39170155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 98
               

               
Conread position:
               
72-382
               

               
Cow position:
               
chr7:43803398-43803714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 195
               

               
Conread position:
               
74-456
               

               
Cow position:
               
chr7:40758565-40758163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 82
               

               
Conread position:
               
74-593
               

               
Cow position:
               
chr7:17756725-17757235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 82
               

               
Conread position:
               
76-631
               

               
Cow position:
               
chr7:47514007-47513449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 93
               

               
Conread position:
               
78-498
               

               
Cow position:
               
chr7:55077001-55076589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
194, 54
               

               
Conread position:
               
83-562
               

               
Cow position:
               
chr7:40189241-40189721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 49
               

               
Conread position:
               
85-631
               

               
Cow position:
               
chr7:13593466-13594012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 188
               

               
Conread position:
               
86-441
               

               
Cow position:
               
chr7:51071932-51072296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 37
               

               
Conread position:
               
91-569
               

               
Cow position:
               
chr7:10513015-10512534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 78
               

               
Conread position:
               
92-534
               

               
Cow position:
               
chr7:40321193-40321632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 64
               

               
Conread position:
               
95-547
               

               
Cow position:
               
chr7:20918637-20918190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
24, 84
               

               
Conread position:
               
95-609
               

               
Cow position:
               
chr7:51909833-51910333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 61
               

               
Conread position:
               
96-409
               

               
Cow position:
               
chr7:14040746-14040433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
114, 60
               

               
Conread position:
               
96-631
               

               
Cow position:
               
chr7:36533735-36534263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 63
               

               
Conread position:
               
96-631
               

               
Cow position:
               
chr7:64269280-64268754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 60
               

               
Conread position:
               
98-510
               

               
Cow position:
               
chr7:2884048-2884460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 71
               

               
Conread position:
               
103-459
               

               
Cow position:
               
chr7:32819521-32819891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 66
               

               
Conread position:
               
104-569
               

               
Cow position:
               
chr7:26485293-26485758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 65
               

               
Conread position:
               
108-387
               

               
Cow position:
               
chr7:20415589-20415302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 61
               

               
Conread position:
               
108-631
               

               
Cow position:
               
chr7:62732901-62733427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 61
               

               
Conread position:
               
109-631
               

               
Cow position:
               
chr7:23679877-23679355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 47
               

               
Conread position:
               
110-442
               

               
Cow position:
               
chr7:33804694-33805025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 46
               

               
Conread position:
               
110-631
               

               
Cow position:
               
chr7:33393031-33393545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 59
               

               
Conread position:
               
111-494
               

               
Cow position:
               
chr7:59844045-59843643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
23, 361
               

               
Conread position:
               
111-509
               

               
Cow position:
               
chr7:21649820-21650221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 58
               

               
Conread position:
               
117-631
               

               
Cow position:
               
chr7:14450079-14450563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 23
               

               
Conread position:
               
118-631
               

               
Cow position:
               
chr7:40067374-40067917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 501
               

               
Conread position:
               
120-385
               

               
Cow position:
               
chr7:68753964-68753689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
50, 235
               

               
Conread position:
               
122-419
               

               
Cow position:
               
chr7:9145754-9145446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
90, 47
               

               
Conread position:
               
123-597
               

               
Cow position:
               
chr7:50773002-50772528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 46
               

               
Conread position:
               
123-625
               

               
Cow position:
               
chr7:9136571-9137081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 33
               

               
Conread position:
               
123-631
               

               
Cow position:
               
chr7:32791419-32791927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
39, 286
               

               
Conread position:
               
124-609
               

               
Cow position:
               
chr7:21240379-21239909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 46
               

               
Conread position:
               
126-631
               

               
Cow position:
               
chr7:53097331-53097830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 43
               

               
Conread position:
               
129-623
               

               
Cow position:
               
chr7:15755714-15755215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 43
               

               
Conread position:
               
129-631
               

               
Cow position:
               
chr7:39444863-39444385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 39
               

               
Conread position:
               
130-623
               

               
Cow position:
               
chr7:47932060-47931562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 40
               

               
Conread position:
               
133-402
               

               
Cow position:
               
chr7:10943114-10942834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
77, 35
               

               
Conread position:
               
133-631
               

               
Cow position:
               
chr7:14536529-14536051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 23
               

               
Conread position:
               
134-558
               

               
Cow position:
               
chr7:32914855-32915280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 26
               

               
Conread position:
               
137-622
               

               
Cow position:
               
chr7:8813180-8812706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 19
               

               
Conread position:
               
142-616
               

               
Cow position:
               
chr7:44496815-44496346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
28, 58
               

               
Conread position:
               
143-631
               

               
Cow position:
               
chr7:30932225-30931746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 27
               

               
Conread position:
               
149-622
               

               
Cow position:
               
chr7:2931451-2931929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
61, 21
               

               
Conread position:
               
150-493
               

               
Cow position:
               
chr7:14076514-14076176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
60, 19
               

               
Conread position:
               
150-494
               

               
Cow position:
               
chr7:53612900-53613240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
13, 180
               

               
Conread position:
               
151-631
               

               
Cow position:
               
chr7:10943795-10943307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 18
               

               
Conread position:
               
151-631
               

               
Cow position:
               
chr7:48722148-48721668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 18
               

               
Conread position:
               
153-566
               

               
Cow position:
               
chr7:45331304-45331713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 16
               

               
Conread position:
               
156-381
               

               
Cow position:
               
chr7:57610516-57610750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
13, 194
               

               
Conread position:
               
156-397
               

               
Cow position:
               
chr7:29010631-29010386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 208
               

               
Conread position:
               
156-455
               

               
Cow position:
               
chr7:58427858-58428147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
164, 13
               

               
Conread position:
               
156-623
               

               
Cow position:
               
chr7:34422499-34422024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 13
               

               
Conread position:
               
156-630
               

               
Cow position:
               
chr7:39159939-39160419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
54, 13
               

               
Conread position:
               
158-461
               

               
Cow position:
               
chr7:39988173-39988480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 11
               

               
Conread position:
               
158-631
               

               
Cow position:
               
chr7:33385698-33386153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 8
               

               
Conread position:
               
159-623
               

               
Cow position:
               
chr7:29302592-29302125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
51, 244
               

               
Conread position:
               
159-631
               

               
Cow position:
               
chr7:40008583-40009065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 10
               

               
Conread position:
               
163-616
               

               
Cow position:
               
chr7:3176179-3175740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
48, 6
               

               
Conread position:
               
164-396
               

               
Cow position:
               
chr7:54784039-54783809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
8, 15
               

               
Conread position:
               
169-401
               

               
Cow position:
               
chr7:24213655-24213897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
98, 227
               

               
Conread position:
               
169-456
               

               
Cow position:
               
chr7:48443982-48443695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
38, 105
               

               
Conread position:
               
169-513
               

               
Cow position:
               
chr7:3322572-3322918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
41, 229
               

               
Conread position:
               
169-547
               

               
Cow position:
               
chr7:36830437-36830807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
41, 122
               

               
Conread position:
               
169-559
               

               
Cow position:
               
chr7:29026947-29027305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
39, 89
               

               
Conread position:
               
169-568
               

               
Cow position:
               
chr7:3256569-3256170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 49
               

               
Conread position:
               
169-624
               

               
Cow position:
               
chr7:36278069-36278544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 134
               

               
Conread position:
               
169-625
               

               
Cow position:
               
chr7:17782898-17782461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 124
               

               
Conread position:
               
169-627
               

               
Cow position:
               
chr7:58863105-58862643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 39
               

               
Conread position:
               
169-630
               

               
Cow position:
               
chr7:54513647-54513172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
74, 362
               

               
Conread position:
               
169-631
               

               
Cow position:
               
chr7:600118-600552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 38
               

               
Conread position:
               
169-631
               

               
Cow position:
               
chr7:11714655-11714205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 236
               

               
Conread position:
               
169-631
               

               
Cow position:
               
chr7:33719827-33720272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 52
               

               
Conread position:
               
169-631
               

               
Cow position:
               
chr7:36996152-36996595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 129
               

               
Conread position:
               
169-631
               

               
Cow position:
               
chr7:37455096-37455562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 128
               

               
Conread position:
               
169-631
               

               
Cow position:
               
chr7:37951955-37952433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 18
               

               
Conread position:
               
169-631
               

               
Cow position:
               
chr7:39415679-39416143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 198
               

               
Conread position:
               
169-631
               

               
Cow position:
               
chr7:63112997-63112540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
41, 24
               

               
Conread position:
               
169-631
               

               
Cow position:
               
chr7:64573286-64572823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
41, 245
               

               
Conread position:
               
170-425
               

               
Cow position:
               
chr7:34568975-34569227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
45, 158
               

               
Conread position:
               
170-442
               

               
Cow position:
               
chr7:24718759-24718476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
40, 58
               

               
Conread position:
               
170-443
               

               
Cow position:
               
chr7:41445137-41445419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
170-452
               

               
Cow position:
               
chr7:64003249-64003531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
9, 39
               

               
Conread position:
               
170-466
               

               
Cow position:
               
chr7:25023682-25023379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
40, 47
               

               
Conread position:
               
170-471
               

               
Cow position:
               
chr7:56838722-56838422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 205
               

               
Conread position:
               
170-477
               

               
Cow position:
               
chr7:45748057-45747755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
171, 48
               

               
Conread position:
               
170-499
               

               
Cow position:
               
chr7:50095156-50095499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 315
               

               
Conread position:
               
170-510
               

               
Cow position:
               
chr7:20081288-20080952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
40, 186
               

               
Conread position:
               
170-561
               

               
Cow position:
               
chr7:23935891-23936279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 35
               

               
Conread position:
               
170-568
               

               
Cow position:
               
chr7:147186-147590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
33, 69
               

               
Conread position:
               
170-615
               

               
Cow position:
               
chr7:8776974-8777431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 353
               

               
Conread position:
               
170-623
               

               
Cow position:
               
chr7:17713689-17713233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 17
               

               
Conread position:
               
170-623
               

               
Cow position:
               
chr7:17967343-17966897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 171
               

               
Conread position:
               
170-624
               

               
Cow position:
               
chr7:22729980-22730432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
41, 237
               

               
Conread position:
               
170-624
               

               
Cow position:
               
chr7:25263142-25263600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
37, 239
               

               
Conread position:
               
171-453
               

               
Cow position:
               
chr7:44095164-44094868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
43, 6
               

               
Conread position:
               
171-513
               

               
Cow position:
               
chr7:20147555-20147214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
98, 46
               

               
Conread position:
               
171-627
               

               
Cow position:
               
chr7:31315095-31315534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 99
               

               
Conread position:
               
172-407
               

               
Cow position:
               
chr7:27349447-27349213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
38, 48
               

               
Conread position:
               
172-466
               

               
Cow position:
               
chr7:25015342-25015041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
38, 45
               

               
Conread position:
               
172-493
               

               
Cow position:
               
chr7:48548082-48547755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
38, 23
               

               
Conread position:
               
172-494
               

               
Cow position:
               
chr7:34223468-34223801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
91, 36
               

               
Conread position:
               
172-510
               

               
Cow position:
               
chr7:31881465-31881783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
38, 70
               

               
Conread position:
               
172-554
               

               
Cow position:
               
chr7:44049587-44049208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 36
               

               
Conread position:
               
172-568
               

               
Cow position:
               
chr7:33298645-33298270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
14, 46
               

               
Conread position:
               
172-625
               

               
Cow position:
               
chr7:6706074-6706533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 225
               

               
Conread position:
               
172-627
               

               
Cow position:
               
chr7:29509731-29510167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 154
               

               
Conread position:
               
172-631
               

               
Cow position:
               
chr7:31694839-31694394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
347, 22
               

               
Conread position:
               
172-631
               

               
Cow position:
               
chr7:66748747-66748295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 230
               

               
Conread position:
               
173-461
               

               
Cow position:
               
chr7:26665779-26665481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
77, 261
               

               
Conread position:
               
173-510
               

               
Cow position:
               
chr7:25496518-25496847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 100
               

               
Conread position:
               
174-409
               

               
Cow position:
               
chr7:14079389-14079146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
48, 164
               

               
Conread position:
               
175-630
               

               
Cow position:
               
chr7:41315657-41315189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 5
               

               
Conread position:
               
176-545
               

               
Cow position:
               
chr7:23177320-23177695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
70, 22
               

               
Conread position:
               
176-631
               

               
Cow position:
               
chr7:15547838-15548267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
68, 22
               

               
Conread position:
               
177-555
               

               
Cow position:
               
chr7:51319582-51319969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 30
               

               
Conread position:
               
178-495
               

               
Cow position:
               
chr7:27360865-27361190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
32, 219
               

               
Conread position:
               
178-564
               

               
Cow position:
               
chr7:38060650-38060255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 346
               

               
Conread position:
               
178-568
               

               
Cow position:
               
chr7:27283462-27283849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 228
               

               
Conread position:
               
178-624
               

               
Cow position:
               
chr7:60547881-60547439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
32, 78
               

               
Conread position:
               
179-563
               

               
Cow position:
               
chr7:39451346-39450972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 36
               

               
Conread position:
               
179-631
               

               
Cow position:
               
chr7:57593226-57593662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 113
               

               
Conread position:
               
180-430
               

               
Cow position:
               
chr7:7142283-7142016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
6, 243
               

               
Conread position:
               
180-563
               

               
Cow position:
               
chr7:48406715-48406320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 362
               

               
Conread position:
               
180-626
               

               
Cow position:
               
chr7:40406452-40406876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 21
               

               
Conread position:
               
180-630
               

               
Cow position:
               
chr7:22793132-22793571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 226
               

               
Conread position:
               
180-630
               

               
Cow position:
               
chr7:47697810-47698254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 87
               

               
Conread position:
               
185-382
               

               
Cow position:
               
chr7:19616905-19616706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
138, 23
               

               
Conread position:
               
185-397
               

               
Cow position:
               
chr7:57161939-57162160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
25, 212
               

               
Conread position:
               
185-411
               

               
Cow position:
               
chr7:51666646-51666422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
118, 23
               

               
Conread position:
               
185-561
               

               
Cow position:
               
chr7:19230711-19230345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
103, 54
               

               
Conread position:
               
185-626
               

               
Cow position:
               
chr7:16022092-16022524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 150
               

               
Conread position:
               
185-631
               

               
Cow position:
               
chr7:42894241-42894696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 73
               

               
Conread position:
               
186-509
               

               
Cow position:
               
chr7:40303473-40303136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
5, 107
               

               
Conread position:
               
186-510
               

               
Cow position:
               
chr7:66266795-66266458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
36, 140
               

               
Conread position:
               
186-622
               

               
Cow position:
               
chr7:63946780-63946370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 22
               

               
Conread position:
               
187-559
               

               
Cow position:
               
chr7:20537155-20537536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 108
               

               
Conread position:
               
188-631
               

               
Cow position:
               
chr7:50066319-50065880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 186
               

               
Conread position:
               
189-631
               

               
Cow position:
               
chr7:9939-10384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 8
               

               
Conread position:
               
189-631
               

               
Cow position:
               
chr7:39094120-39093686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
22, 56
               

               
Conread position:
               
190-409
               

               
Cow position:
               
chr7:14712398-14712179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
22, 102
               

               
Conread position:
               
190-568
               

               
Cow position:
               
chr7:44986453-44986828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 94
               

               
Conread position:
               
190-625
               

               
Cow position:
               
chr7:33280194-33279757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
20, 167
               

               
Conread position:
               
190-631
               

               
Cow position:
               
chr7:29479332-29479758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 35
               

               
Conread position:
               
190-631
               

               
Cow position:
               
chr7:68173358-68172920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
77, 198
               

               
Conread position:
               
191-494
               

               
Cow position:
               
chr7:11872801-11872497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
58, 164
               

               
Conread position:
               
191-569
               

               
Cow position:
               
chr7:38696644-38697016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 216
               

               
Conread position:
               
191-631
               

               
Cow position:
               
chr7:15855512-15855106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
19, 77
               

               
Conread position:
               
193-469
               

               
Cow position:
               
chr7:23131395-23131683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
17, 156
               

               
Conread position:
               
194-442
               

               
Cow position:
               
chr7:61765113-61765373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
21, 106
               

               
Conread position:
               
194-460
               

               
Cow position:
               
chr7:4840608-4840886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
194-621
               

               
Cow position:
               
chr7:39144490-39144919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
5, 15
               

               
Conread position:
               
197-509
               

               
Cow position:
               
chr7:3283163-3283481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
47, 224
               

               
Conread position:
               
197-509
               

               
Cow position:
               
chr7:3311643-3311961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
47, 224
               

               
Conread position:
               
198-495
               

               
Cow position:
               
chr7:43881881-43882189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
18, 199
               

               
Conread position:
               
198-536
               

               
Cow position:
               
chr7:59168081-59168410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 96
               

               
Conread position:
               
198-630
               

               
Cow position:
               
chr7:4720431-4719990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 52
               

               
Conread position:
               
199-627
               

               
Cow position:
               
chr7:50859814-50860229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 152
               

               
Conread position:
               
200-508
               

               
Cow position:
               
chr7:25960278-25960588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
119, 51
               

               
Conread position:
               
200-631
               

               
Cow position:
               
chr7:14174602-14174206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
381, 33
               

               
Conread position:
               
200-631
               

               
Cow position:
               
chr7:55688392-55687945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 110
               

               
Conread position:
               
201-399
               

               
Cow position:
               
chr7:12202109-12201910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
116, 49
               

               
Conread position:
               
201-499
               

               
Cow position:
               
chr7:34084444-34084141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
9, 190
               

               
Conread position:
               
201-502
               

               
Cow position:
               
chr7:32079265-32079566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
10, 118
               

               
Conread position:
               
201-631
               

               
Cow position:
               
chr7:51039238-51039669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
9, 77
               

               
Conread position:
               
201-631
               

               
Cow position:
               
chr7:51644483-51644878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 29
               

               
Conread position:
               
202-631
               

               
Cow position:
               
chr7:13963010-13963447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
8, 319
               

               
Conread position:
               
203-455
               

               
Cow position:
               
chr7:6745009-6745285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
203-495
               

               
Cow position:
               
chr7:5723506-5723811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
43, 197
               

               
Conread position:
               
203-631
               

               
Cow position:
               
chr7:37697612-37698045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
7, 28
               

               
Conread position:
               
204-631
               

               
Cow position:
               
chr7:48714657-48715102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 202
               

               
Conread position:
               
208-432
               

               
Cow position:
               
chr7:11715518-11715760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
208-495
               

               
Cow position:
               
chr7:4864222-4863940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
59, 115
               

               
Conread position:
               
211-391
               

               
Cow position:
               
chr7:6800738-6800543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
220-509
               

               
Cow position:
               
chr7:22152979-22153281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
49, 196
               

               
Conread position:
               
220-512
               

               
Cow position:
               
chr7:32372685-32372983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 243
               

               
Conread position:
               
220-622
               

               
Cow position:
               
chr7:23624821-23624437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
41, 128
               

               
Conread position:
               
220-624
               

               
Cow position:
               
chr7:39145926-39145512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
47, 124
               

               
Conread position:
               
221-627
               

               
Cow position:
               
chr7:54013184-54013611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 91
               

               
Conread position:
               
225-631
               

               
Cow position:
               
chr7:20168385-20168783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 114
               

               
Conread position:
               
226-565
               

               
Cow position:
               
chr7:33989793-33990123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
39, 71
               

               
Conread position:
               
228-624
               

               
Cow position:
               
chr7:37777986-37777587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
93, 64
               

               
Conread position:
               
229-618
               

               
Cow position:
               
chr7:21565715-21565327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 75
               

               
Conread position:
               
231-631
               

               
Cow position:
               
chr7:37394154-37394536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 116
               

               
Conread position:
               
236-442
               

               
Cow position:
               
chr7:44942301-44942510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
83, 50
               

               
Conread position:
               
237-507
               

               
Cow position:
               
chr7:30816443-30816172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
32, 89
               

               
Conread position:
               
241-454
               

               
Cow position:
               
chr7:5300538-5300324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
73, 19
               

               
Conread position:
               
241-631
               

               
Cow position:
               
chr7:11443847-11444226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
35, 98
               

               
Conread position:
               
244-576
               

               
Cow position:
               
chr7:23090274-23089964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
25, 63
               

               
Conread position:
               
244-626
               

               
Cow position:
               
chr7:57660312-57659929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
23, 43
               

               
Conread position:
               
245-476
               

               
Cow position:
               
chr7:36724760-36724997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
24, 155
               

               
Conread position:
               
245-631
               

               
Cow position:
               
chr7:9800206-9800616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
21, 170
               

               
Conread position:
               
246-475
               

               
Cow position:
               
chr7:40335891-40336128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
22, 135
               

               
Conread position:
               
249-502
               

               
Cow position:
               
chr7:23251697-23251451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
91, 41
               

               
Conread position:
               
250-631
               

               
Cow position:
               
chr7:42593417-42593027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 54
               

               
Conread position:
               
252-631
               

               
Cow position:
               
chr7:18188358-18187991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 90
               

               
Conread position:
               
253-400
               

               
Cow position:
               
chr7:20470891-20471042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
253-509
               

               
Cow position:
               
chr7:5212614-5212354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
253-621
               

               
Cow position:
               
chr7:913910-914275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
14, 36
               

               
Conread position:
               
255-468
               

               
Cow position:
               
chr7:28643416-28643637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
60, 130
               

               
Conread position:
               
258-624
               

               
Cow position:
               
chr7:5052689-5052336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
61, 78
               

               
Conread position:
               
259-470
               

               
Cow position:
               
chr7:43411249-43411460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
60, 131
               

               
Conread position:
               
259-495
               

               
Cow position:
               
chr7:38025695-38025932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
56, 14
               

               
Conread position:
               
259-610
               

               
Cow position:
               
chr7:55085526-55085876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 158
               

               
Conread position:
               
259-631
               

               
Cow position:
               
chr7:50566340-50565957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
39, 135
               

               
Conread position:
               
260-380
               

               
Cow position:
               
chr7:5399171-5399050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
14, 101
               

               
Conread position:
               
260-389
               

               
Cow position:
               
chr7:27359603-27359473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
73, 68
               

               
Conread position:
               
260-403
               

               
Cow position:
               
chr7:66335883-66335745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
260-406
               

               
Cow position:
               
chr7:7553391-7553242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
260-409
               

               
Cow position:
               
chr7:48205224-48205076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
128, 79
               

               
Conread position:
               
260-428
               

               
Cow position:
               
chr7:35742535-35742360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
260-491
               

               
Cow position:
               
chr7:47937047-47936811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
260-503
               

               
Cow position:
               
chr7:8826692-8826930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
67, 26
               

               
Conread position:
               
260-509
               

               
Cow position:
               
chr7:34412403-34412156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
60, 197
               

               
Conread position:
               
260-515
               

               
Cow position:
               
chr7:8272530-8272790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
260-548
               

               
Cow position:
               
chr7:8977947-8977667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
81, 154
               

               
Conread position:
               
260-606
               

               
Cow position:
               
chr7:15561552-15561206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
55, 73
               

               
Conread position:
               
260-612
               

               
Cow position:
               
chr7:14481932-14482285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
37, 141
               

               
Conread position:
               
260-612
               

               
Cow position:
               
chr7:21166376-21166022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
59, 132
               

               
Conread position:
               
260-623
               

               
Cow position:
               
chr7:68315118-68315471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
81, 25
               

               
Conread position:
               
260-624
               

               
Cow position:
               
chr7:3304440-3304809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
59, 258
               

               
Conread position:
               
260-624
               

               
Cow position:
               
chr7:9781856-9781491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 133
               

               
Conread position:
               
260-624
               

               
Cow position:
               
chr7:18857113-18856758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
57, 82
               

               
Conread position:
               
260-630
               

               
Cow position:
               
chr7:4764716-4765075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 17
               

               
Conread position:
               
260-630
               

               
Cow position:
               
chr7:31497594-31497937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
81, 27
               

               
Conread position:
               
260-630
               

               
Cow position:
               
chr7:46818623-46818264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 101
               

               
Conread position:
               
260-631
               

               
Cow position:
               
chr7:31503725-31504086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
55, 137
               

               
Conread position:
               
260-631
               

               
Cow position:
               
chr7:43940381-43940725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
225, 25
               

               
Conread position:
               
260-631
               

               
Cow position:
               
chr7:52680713-52681088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
55, 257
               

               
Conread position:
               
260-631
               

               
Cow position:
               
chr7:53763710-53763354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
81, 26
               

               
Conread position:
               
261-456
               

               
Cow position:
               
chr7:47172833-47172637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
127, 78
               

               
Conread position:
               
261-558
               

               
Cow position:
               
chr7:38263542-38263843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 200
               

               
Conread position:
               
261-564
               

               
Cow position:
               
chr7:34214471-34214762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
80, 29
               

               
Conread position:
               
261-631
               

               
Cow position:
               
chr7:67873058-67873433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
56, 256
               

               
Conread position:
               
262-487
               

               
Cow position:
               
chr7:46106012-46105782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
262-492
               

               
Cow position:
               
chr7:24667267-24667489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
262-505
               

               
Cow position:
               
chr7:3773393-3773148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 37
               

               
Conread position:
               
262-509
               

               
Cow position:
               
chr7:68516806-68516568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
52, 80
               

               
Conread position:
               
262-631
               

               
Cow position:
               
chr7:25195412-25195787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
59, 122
               

               
Conread position:
               
263-631
               

               
Cow position:
               
chr7:11960293-11960628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
78, 12
               

               
Conread position:
               
264-624
               

               
Cow position:
               
chr7:32093125-32093483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
64, 147
               

               
Conread position:
               
264-631
               

               
Cow position:
               
chr7:49417479-49417843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 248
               

               
Conread position:
               
265-411
               

               
Cow position:
               
chr7:6820775-6820925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
265-563
               

               
Cow position:
               
chr7:49903652-49903943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 77
               

               
Conread position:
               
267-568
               

               
Cow position:
               
chr7:10381683-10381977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
74, 11
               

               
Conread position:
               
267-631
               

               
Cow position:
               
chr7:11958552-11958206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 65
               

               
Conread position:
               
269-428
               

               
Cow position:
               
chr7:13296138-13295973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
71, 118
               

               
Conread position:
               
269-568
               

               
Cow position:
               
chr7:58923276-58923575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
51, 251
               

               
Conread position:
               
270-496
               

               
Cow position:
               
chr7:5853242-5853458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
71, 21
               

               
Conread position:
               
270-511
               

               
Cow position:
               
chr7:5238188-5237959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
28, 113
               

               
Conread position:
               
270-567
               

               
Cow position:
               
chr7:34974196-34974485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
132, 32
               

               
Conread position:
               
271-411
               

               
Cow position:
               
chr7:33810565-33810706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
52, 88
               

               
Conread position:
               
271-504
               

               
Cow position:
               
chr7:7506253-7506009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
273-627
               

               
Cow position:
               
chr7:15559576-15559917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 60
               

               
Conread position:
               
275-509
               

               
Cow position:
               
chr7:58351075-58350844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
39, 11
               

               
Conread position:
               
276-481
               

               
Cow position:
               
chr7:14353902-14353694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
70, 139
               

               
Conread position:
               
277-510
               

               
Cow position:
               
chr7:11854383-11854618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
30, 71
               

               
Conread position:
               
278-507
               

               
Cow position:
               
chr7:13133801-13133582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
25, 51
               

               
Conread position:
               
278-509
               

               
Cow position:
               
chr7:46327876-46327646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
36, 19
               

               
Conread position:
               
278-572
               

               
Cow position:
               
chr7:28544065-28544355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 118
               

               
Conread position:
               
278-631
               

               
Cow position:
               
chr7:32945963-32946303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 64
               

               
Conread position:
               
279-487
               

               
Cow position:
               
chr7:51638677-51638467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
62, 181
               

               
Conread position:
               
279-624
               

               
Cow position:
               
chr7:39538111-39538457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
40, 107
               

               
Conread position:
               
279-631
               

               
Cow position:
               
chr7:5199660-5199321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 188
               

               
Conread position:
               
280-412
               

               
Cow position:
               
chr7:58296997-58296864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
61, 48
               

               
Conread position:
               
281-504
               

               
Cow position:
               
chr7:13228683-13228462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
61, 15
               

               
Conread position:
               
281-595
               

               
Cow position:
               
chr7:42636873-42637167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 109
               

               
Conread position:
               
285-631
               

               
Cow position:
               
chr7:8821373-8821708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
131, 27
               

               
Conread position:
               
289-495
               

               
Cow position:
               
chr7:41745574-41745357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
289-631
               

               
Cow position:
               
chr7:53579493-53579151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
31, 94
               

               
Conread position:
               
292-564
               

               
Cow position:
               
chr7:1792558-1792270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
14, 85
               

               
Conread position:
               
292-631
               

               
Cow position:
               
chr7:41464376-41464724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
22, 53
               

               
Conread position:
               
293-631
               

               
Cow position:
               
chr7:40425412-40425072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
26, 117
               

               
Conread position:
               
296-576
               

               
Cow position:
               
chr7:39472610-39472330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
41, 186
               

               
Conread position:
               
296-624
               

               
Cow position:
               
chr7:57829132-57829459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
18, 44
               

               
Conread position:
               
297-624
               

               
Cow position:
               
chr7:13067067-13067390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
23, 62
               

               
Conread position:
               
299-631
               

               
Cow position:
               
chr7:15534162-15533846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
114, 45
               

               
Conread position:
               
300-631
               

               
Cow position:
               
chr7:37435156-37435483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
40, 107
               

               
Conread position:
               
301-631
               

               
Cow position:
               
chr7:21009026-21008685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
114, 76
               

               
Conread position:
               
302-510
               

               
Cow position:
               
chr7:57577388-57577184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
12, 38
               

               
Conread position:
               
302-627
               

               
Cow position:
               
chr7:69132865-69133191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
18, 99
               

               
Conread position:
               
302-631
               

               
Cow position:
               
chr7:61778758-61779090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
15, 213
               

               
Conread position:
               
304-631
               

               
Cow position:
               
chr7:8658429-8658751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 77
               

               
Conread position:
               
305-504
               

               
Cow position:
               
chr7:8102338-8102538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
36, 85
               

               
Conread position:
               
305-622
               

               
Cow position:
               
chr7:32260285-32259970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
36, 61
               

               
Conread position:
               
306-631
               

               
Cow position:
               
chr7:35088578-35088897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
22, 103
               

               
Conread position:
               
307-631
               

               
Cow position:
               
chr7:60869866-60870163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
34, 110
               

               
Conread position:
               
308-631
               

               
Cow position:
               
chr7:35300500-35300184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 208
               

               
Conread position:
               
309-622
               

               
Cow position:
               
chr7:68857665-68857357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
8, 29
               

               
Conread position:
               
312-624
               

               
Cow position:
               
chr7:40308592-40308287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
29, 89
               

               
Conread position:
               
312-631
               

               
Cow position:
               
chr7:29682524-29682211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
103, 29
               

               
Conread position:
               
313-557
               

               
Cow position:
               
chr7:39823672-39823436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
100, 24
               

               
Conread position:
               
313-630
               

               
Cow position:
               
chr7:60732715-60732394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 156
               

               
Conread position:
               
314-547
               

               
Cow position:
               
chr7:18288342-18288114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
27, 14
               

               
Conread position:
               
316-631
               

               
Cow position:
               
chr7:9449723-9449432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
25, 73
               

               
Conread position:
               
316-631
               

               
Cow position:
               
chr7:26909824-26909526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
27, 67
               

               
Conread position:
               
318-627
               

               
Cow position:
               
chr7:9161738-9161437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
23, 76
               

               
Conread position:
               
319-623
               

               
Cow position:
               
chr7:40484252-40484550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
21, 72
               

               
Conread position:
               
322-627
               

               
Cow position:
               
chr7:428849-428554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
19, 82
               

               
Conread position:
               
323-598
               

               
Cow position:
               
chr7:32221989-32222267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
92, 200
               

               
Conread position:
               
324-631
               

               
Cow position:
               
chr7:50165967-50166265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
13, 30
               

               
Conread position:
               
325-563
               

               
Cow position:
               
chr7:40235818-40235579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
90, 114
               

               
Conread position:
               
325-597
               

               
Cow position:
               
chr7:4811959-4812220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
16, 39
               

               
Conread position:
               
325-617
               

               
Cow position:
               
chr7:1269609-1269327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
16, 64
               

               
Conread position:
               
325-618
               

               
Cow position:
               
chr7:24460895-24461194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
325-630
               

               
Cow position:
               
chr7:30017580-30017286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
66, 137
               

               
Conread position:
               
325-630
               

               
Cow position:
               
chr7:43484602-43484297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
16, 79
               

               
Conread position:
               
325-631
               

               
Cow position:
               
chr7:36856480-36856772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
16, 37
               

               
Conread position:
               
327-547
               

               
Cow position:
               
chr7:29121840-29122055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
14, 91
               

               
Conread position:
               
328-631
               

               
Cow position:
               
chr7:13835980-13836275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
13, 32
               

               
Conread position:
               
328-631
               

               
Cow position:
               
chr7:41615049-41614741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
13, 178
               

               
Conread position:
               
329-630
               

               
Cow position:
               
chr7:56886568-56886272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
8, 184
               

               
Conread position:
               
332-541
               

               
Cow position:
               
chr7:35245645-35245438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
74, 62
               

               
Conread position:
               
336-616
               

               
Cow position:
               
chr7:44208900-44209177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
73, 62
               

               
Conread position:
               
338-627
               

               
Cow position:
               
chr7:39838928-39838630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
58, 116
               

               
Conread position:
               
338-630
               

               
Cow position:
               
chr7:17750885-17750605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 16
               

               
Conread position:
               
338-630
               

               
Cow position:
               
chr7:18947794-18947523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
75, 56
               

               
Conread position:
               
338-631
               

               
Cow position:
               
chr7:168717-168421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
339-461
               

               
Cow position:
               
chr7:14351651-14351522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
339-619
               

               
Cow position:
               
chr7:21268063-21267789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
107, 59
               

               
Conread position:
               
339-624
               

               
Cow position:
               
chr7:7535486-7535765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
54, 163
               

               
Conread position:
               
339-631
               

               
Cow position:
               
chr7:32774213-32774488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
339-631
               

               
Cow position:
               
chr7:38429759-38429480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
48, 63
               

               
Conread position:
               
339-631
               

               
Cow position:
               
chr7:54054540-54054834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
67, 116
               

               
Conread position:
               
339-631
               

               
Cow position:
               
chr7:65988914-65988615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
143, 45
               

               
Conread position:
               
341-631
               

               
Cow position:
               
chr7:38361277-38360998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
342-563
               

               
Cow position:
               
chr7:11549620-11549836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
71, 63
               

               
Conread position:
               
343-593
               

               
Cow position:
               
chr7:52517289-52517534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
206, 40
               

               
Conread position:
               
344-568
               

               
Cow position:
               
chr7:43307127-43307352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
49, 9
               

               
Conread position:
               
344-626
               

               
Cow position:
               
chr7:14316897-14317171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
22, 167
               

               
Conread position:
               
345-623
               

               
Cow position:
               
chr7:63121460-63121186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
57, 103
               

               
Conread position:
               
346-630
               

               
Cow position:
               
chr7:26263700-26263418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 178
               

               
Conread position:
               
348-627
               

               
Cow position:
               
chr7:12495148-12494888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
349-614
               

               
Cow position:
               
chr7:50493954-50494217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
54, 170
               

               
Conread position:
               
350-610
               

               
Cow position:
               
chr7:35642620-35642367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
192, 45
               

               
Conread position:
               
350-627
               

               
Cow position:
               
chr7:40276232-40275946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
61, 141
               

               
Conread position:
               
350-631
               

               
Cow position:
               
chr7:46951995-46952272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
67, 21
               

               
Conread position:
               
351-631
               

               
Cow position:
               
chr7:29505077-29505349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
64, 162
               

               
Conread position:
               
355-551
               

               
Cow position:
               
chr7:61699729-61699533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
7, 164
               

               
Conread position:
               
355-631
               

               
Cow position:
               
chr7:8089129-8089399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
53, 118
               

               
Conread position:
               
356-623
               

               
Cow position:
               
chr7:25785806-25786070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
44, 30
               

               
Conread position:
               
356-631
               

               
Cow position:
               
chr7:37498229-37497951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
13, 161
               

               
Conread position:
               
357-552
               

               
Cow position:
               
chr7:10759744-10759544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
58, 37
               

               
Conread position:
               
359-631
               

               
Cow position:
               
chr7:9070433-9070690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
35, 43
               

               
Conread position:
               
361-541
               

               
Cow position:
               
chr7:32899979-32899803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
52, 14
               

               
Conread position:
               
362-543
               

               
Cow position:
               
chr7:43296882-43297062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
39, 152
               

               
Conread position:
               
364-565
               

               
Cow position:
               
chr7:49405267-49405461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
365-576
               

               
Cow position:
               
chr7:598220-598424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
47, 29
               

               
Conread position:
               
367-504
               

               
Cow position:
               
chr7:19221545-19221684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
368-631
               

               
Cow position:
               
chr7:25464547-25464806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
52, 36
               

               
Conread position:
               
369-631
               

               
Cow position:
               
chr7:23818871-23819129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
60, 148
               

               
Conread position:
               
370-627
               

               
Cow position:
               
chr7:39947263-39947014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
222, 16
               

               
Conread position:
               
370-631
               

               
Cow position:
               
chr7:31523534-31523783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
24, 31
               

               
Conread position:
               
374-631
               

               
Cow position:
               
chr7:53653769-53653532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
376-630
               

               
Cow position:
               
chr7:31240677-31240928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
156, 28
               

               
Conread position:
               
378-622
               

               
Cow position:
               
chr7:32884153-32884384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
26, 89
               

               
Conread position:
               
382-631
               

               
Cow position:
               
chr7:9077813-9077571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
22, 12
               

               
Conread position:
               
385-631
               

               
Cow position:
               
chr7:11897468-11897699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
150, 14
               

               
Conread position:
               
386-631
               

               
Cow position:
               
chr7:26871994-26871753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
29, 129
               

               
Conread position:
               
386-631
               

               
Cow position:
               
chr7:50021459-50021229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
20, 29
               

               
Conread position:
               
389-631
               

               
Cow position:
               
chr7:12488432-12488661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
22, 130
               

               
Conread position:
               
392-631
               

               
Cow position:
               
chr7:6044133-6043900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
23, 14
               

               
Conread position:
               
395-599
               

               
Cow position:
               
chr7:11487662-11487466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
395-631
               

               
Cow position:
               
chr7:56557139-56556916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
13, 18
               

               
Conread position:
               
396-631
               

               
Cow position:
               
chr7:10415122-10414903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
401-594
               

               
Cow position:
               
chr7:8090402-8090215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
401-622
               

               
Cow position:
               
chr7:9660289-9660497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
14, 64
               

               
Conread position:
               
401-623
               

               
Cow position:
               
chr7:11015696-11015928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
401-631
               

               
Cow position:
               
chr7:9816012-9816237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
401-631
               

               
Cow position:
               
chr7:43084891-43085114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
105, 11
               

               
Conread position:
               
405-631
               

               
Cow position:
               
chr7:57243212-57242988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
128, 8
               

               
Conread position:
               
412-631
               

               
Cow position:
               
chr7:6469646-6469863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
119, 99
               

               
Conread position:
               
414-626
               

               
Cow position:
               
chr7:68595950-68595753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
59, 72
               

               
Conread position:
               
415-631
               

               
Cow position:
               
chr7:62498021-62497816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
71, 104
               

               
Conread position:
               
416-631
               

               
Cow position:
               
chr7:4138727-4138524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
417-631
               

               
Cow position:
               
chr7:11796872-11796666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
423-625
               

               
Cow position:
               
chr7:46191922-46191728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
427-621
               

               
Cow position:
               
chr7:7510813-7510624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
143, 82
               

               
Conread position:
               
427-626
               

               
Cow position:
               
chr7:6821085-6821279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
427-630
               

               
Cow position:
               
chr7:40414957-40414766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
427-631
               

               
Cow position:
               
chr7:11785004-11784808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
432-631
               

               
Cow position:
               
chr7:11054596-11054791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
435-631
               

               
Cow position:
               
chr7:12918529-12918345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
435-631
               

               
Cow position:
               
chr7:23671800-23671990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
437-624
               

               
Cow position:
               
chr7:10945397-10945580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
440-630
               

               
Cow position:
               
chr7:40311008-40310824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
119, 6
               

               
Conread position:
               
442-631
               

               
Cow position:
               
chr7:10438383-10438564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
448-627
               

               
Cow position:
               
chr7:19329247-19329076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
448-630
               

               
Cow position:
               
chr7:8293091-8292906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
36, 96
               

               
Conread position:
               
461-631
               

               
Cow position:
               
chr7:39988808-39988970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
469-631
               

               
Cow position:
               
chr7:10441886-10441732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
42, 0
               
Show alignments to all cow chromosomes.