Cow genome map
| Conread name: | Ovi1-UMC-pd3ov1-003-d11 |
| Conread position: | 114-346 |
| Cow position: | chr11:53130438-53130674 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 84 |
| Conread position: | 123-346 |
| Cow position: | chr11:16910735-16910500 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 105, 140 |
| Conread position: | 123-346 |
| Cow position: | chr11:45277521-45277290 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 136, 46 |
| Conread position: | 129-346 |
| Cow position: | chr11:865936-866166 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 75, 122 |
| Conread position: | 129-346 |
| Cow position: | chr11:64638883-64638670 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 118, 76 |
| Conread position: | 130-344 |
| Cow position: | chr11:17279016-17278804 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 116, 36 |
| Conread position: | 130-346 |
| Cow position: | chr11:8339764-8339542 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 130-346 |
| Cow position: | chr11:30354703-30354933 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 69, 35 |
| Conread position: | 130-346 |
| Cow position: | chr11:35684858-35684631 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 130-346 |
| Cow position: | chr11:40819004-40818776 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 178 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 131-323 |
| Cow position: | chr11:27907198-27907392 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 115, 18 |
| Conread position: | 131-332 |
| Cow position: | chr11:64932656-64932448 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 85, 112 |
| Conread position: | 131-338 |
| Cow position: | chr11:30191805-30192028 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 131-343 |
| Cow position: | chr11:33256078-33255857 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 116, 7 |
| Conread position: | 131-344 |
| Cow position: | chr11:6154056-6154274 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 130, 49 |
| Conread position: | 131-344 |
| Cow position: | chr11:7924943-7924725 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 128, 49 |
| Conread position: | 131-344 |
| Cow position: | chr11:27939128-27939347 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 131-344 |
| Cow position: | chr11:35874332-35874130 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 7, 66 |
| Conread position: | 131-344 |
| Cow position: | chr11:44233999-44234215 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 82, 129 |
| Conread position: | 131-344 |
| Cow position: | chr11:44637119-44636896 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 131-344 |
| Cow position: | chr11:68207206-68206977 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 73, 138 |
| Conread position: | 131-345 |
| Cow position: | chr11:17968934-17968714 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 168 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 131-345 |
| Cow position: | chr11:31352929-31352707 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 128, 111 |
| Conread position: | 131-346 |
| Cow position: | chr11:40823-41047 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 131-346 |
| Cow position: | chr11:951916-952135 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 118, 39 |
| Conread position: | 131-346 |
| Cow position: | chr11:2911179-2910958 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 171 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 131-346 |
| Cow position: | chr11:5032135-5031911 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 116, 110 |
| Conread position: | 131-346 |
| Cow position: | chr11:5272984-5272760 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 116, 145 |
| Conread position: | 131-346 |
| Cow position: | chr11:8525461-8525247 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 151, 39 |
| Conread position: | 131-346 |
| Cow position: | chr11:9432962-9433186 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 81, 57 |
| Conread position: | 131-346 |
| Cow position: | chr11:10076416-10076629 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 174 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 115, 157 |
| Conread position: | 131-346 |
| Cow position: | chr11:10094984-10095210 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 178 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 131-346 |
| Cow position: | chr11:11534256-11534038 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 126, 39 |
| Conread position: | 131-346 |
| Cow position: | chr11:13061577-13061366 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 115, 62 |
| Conread position: | 131-346 |
| Cow position: | chr11:15285977-15285751 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 177 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 131-346 |
| Cow position: | chr11:17321303-17321524 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 115, 100 |
| Conread position: | 131-346 |
| Cow position: | chr11:18086696-18086476 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 115, 102 |
| Conread position: | 131-346 |
| Cow position: | chr11:18117930-18118154 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 131-346 |
| Cow position: | chr11:19098898-19098675 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 115, 46 |
| Conread position: | 131-346 |
| Cow position: | chr11:22103404-22103617 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 110 |
| Conread position: | 131-346 |
| Cow position: | chr11:23138430-23138198 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 83, 121 |
| Conread position: | 131-346 |
| Cow position: | chr11:23251962-23251737 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 179 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 70, 80 |
| Conread position: | 131-346 |
| Cow position: | chr11:25386712-25386927 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 115, 128 |
| Conread position: | 131-346 |
| Cow position: | chr11:26551060-26551281 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 154, 116 |
| Conread position: | 131-346 |
| Cow position: | chr11:28848335-28848111 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 131-346 |
| Cow position: | chr11:30879319-30879546 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 131-346 |
| Cow position: | chr11:32067389-32067175 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 148, 75 |
| Conread position: | 131-346 |
| Cow position: | chr11:33001644-33001863 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 115, 20 |
| Conread position: | 131-346 |
| Cow position: | chr11:34615910-34616131 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 131-346 |
| Cow position: | chr11:35363138-35363361 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 177 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 115, 19 |
| Conread position: | 131-346 |
| Cow position: | chr11:35579896-35580121 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 118, 74 |
| Conread position: | 131-346 |
| Cow position: | chr11:36309768-36309547 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 173 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 90, 81 |
| Conread position: | 131-346 |
| Cow position: | chr11:37118126-37118351 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 181 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 112, 129 |
| Conread position: | 131-346 |
| Cow position: | chr11:37292498-37292723 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 115, 128 |
| Conread position: | 131-346 |
| Cow position: | chr11:41577363-41577150 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 153, 123 |
| Conread position: | 131-346 |
| Cow position: | chr11:42292193-42291969 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 115, 66 |
| Conread position: | 131-346 |
| Cow position: | chr11:42793318-42793109 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 115, 64 |
| Conread position: | 131-346 |
| Cow position: | chr11:43430816-43430587 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 131-346 |
| Cow position: | chr11:43897777-43898004 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 177 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 131-346 |
| Cow position: | chr11:44642639-44642423 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 115, 56 |
| Conread position: | 131-346 |
| Cow position: | chr11:48672350-48672568 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 117 |
| Conread position: | 131-346 |
| Cow position: | chr11:52297578-52297357 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 115, 53 |
| Conread position: | 131-346 |
| Cow position: | chr11:55117115-55117339 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 176 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 115, 62 |
| Conread position: | 131-346 |
| Cow position: | chr11:60515324-60515111 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 115, 149 |
| Conread position: | 131-346 |
| Cow position: | chr11:61137556-61137343 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 118, 165 |
| Conread position: | 131-346 |
| Cow position: | chr11:61454893-61454668 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 131-346 |
| Cow position: | chr11:62750108-62749884 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 131-346 |
| Cow position: | chr11:62979119-62979344 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 131-346 |
| Cow position: | chr11:64029614-64029394 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 131-346 |
| Cow position: | chr11:64047962-64048185 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 172 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 131-346 |
| Cow position: | chr11:65409520-65409291 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 131-346 |
| Cow position: | chr11:67746919-67747148 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 131-346 |
| Cow position: | chr11:68571030-68570810 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 131-346 |
| Cow position: | chr11:69118941-69119166 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 131-346 |
| Cow position: | chr11:74929422-74929646 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 115, 110 |
| Conread position: | 131-346 |
| Cow position: | chr11:76114294-76114518 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 173 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 131-346 |
| Cow position: | chr11:81174532-81174753 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 110 |
| Conread position: | 131-346 |
| Cow position: | chr11:81931428-81931221 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 46, 68 |
| Conread position: | 132-337 |
| Cow position: | chr11:50197802-50197586 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 171 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 132-340 |
| Cow position: | chr11:28843101-28843316 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 110, 95 |
| Conread position: | 132-340 |
| Cow position: | chr11:29802911-29802704 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 146, 71 |
| Conread position: | 132-343 |
| Cow position: | chr11:18912906-18913126 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 36, 69 |
| Conread position: | 132-344 |
| Cow position: | chr11:50153174-50152954 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 117, 29 |
| Conread position: | 132-344 |
| Cow position: | chr11:76768008-76768229 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 112, 126 |
| Conread position: | 132-345 |
| Cow position: | chr11:18890913-18891145 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 132-345 |
| Cow position: | chr11:49074643-49074428 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 110, 19 |
| Conread position: | 132-345 |
| Cow position: | chr11:70484220-70483996 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 27, 128 |
| Conread position: | 132-346 |
| Cow position: | chr11:10875665-10875889 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 114, 127 |
| Conread position: | 132-346 |
| Cow position: | chr11:17112984-17112768 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 155 |
| Conread position: | 132-346 |
| Cow position: | chr11:18067195-18066981 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 124, 11 |
| Conread position: | 132-346 |
| Cow position: | chr11:24967108-24967320 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 153, 100 |
| Conread position: | 132-346 |
| Cow position: | chr11:25808113-25807892 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 114, 71 |
| Conread position: | 132-346 |
| Cow position: | chr11:30165143-30165373 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 132-346 |
| Cow position: | chr11:32043840-32043621 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 115, 50 |
| Conread position: | 132-346 |
| Cow position: | chr11:42016991-42016772 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 114, 22 |
| Conread position: | 132-346 |
| Cow position: | chr11:46036170-46035958 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 114, 17 |
| Conread position: | 132-346 |
| Cow position: | chr11:49550431-49550214 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 130, 72 |
| Conread position: | 132-346 |
| Cow position: | chr11:53313919-53313703 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 114, 54 |
| Conread position: | 132-346 |
| Cow position: | chr11:67293987-67293767 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 71, 111 |
| Conread position: | 132-346 |
| Cow position: | chr11:73478266-73478483 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 150, 124 |
| Conread position: | 132-346 |
| Cow position: | chr11:81337323-81337106 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 114, 47 |
| Conread position: | 133-344 |
| Cow position: | chr11:19238513-19238295 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 105, 127 |
| Conread position: | 133-346 |
| Cow position: | chr11:26483365-26483577 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 165 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 126, 48 |
| Conread position: | 133-346 |
| Cow position: | chr11:26535409-26535642 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 54, 112 |
| Conread position: | 134-344 |
| Cow position: | chr11:71846704-71846484 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 134-346 |
| Cow position: | chr11:33350057-33349835 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 134-346 |
| Cow position: | chr11:46474047-46473819 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 134-346 |
| Cow position: | chr11:61202798-61203029 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 134-346 |
| Cow position: | chr11:84774762-84774972 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 168 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 106, 119 |
| Conread position: | 135-345 |
| Cow position: | chr11:61846360-61846139 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 104, 127 |
| Conread position: | 136-346 |
| Cow position: | chr11:33294145-33293924 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 136-346 |
| Cow position: | chr11:39034108-39034313 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 110, 61 |
| Conread position: | 136-346 |
| Cow position: | chr11:56751728-56751521 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 110, 60 |
| Conread position: | 137-344 |
| Cow position: | chr11:25336719-25336939 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 137-346 |
| Cow position: | chr11:44036363-44036582 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 138-346 |
| Cow position: | chr11:67951308-67951096 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 120, 45 |
| Conread position: | 139-344 |
| Cow position: | chr11:41809827-41809613 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 107, 102 |
| Conread position: | 139-346 |
| Cow position: | chr11:26515136-26515339 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 139-346 |
| Cow position: | chr11:46746282-46746492 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 53, 97 |
| Conread position: | 139-346 |
| Cow position: | chr11:81614979-81614775 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 108, 64 |
| Conread position: | 141-346 |
| Cow position: | chr11:48271847-48272061 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 169 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 105, 78 |
| Conread position: | 141-346 |
| Cow position: | chr11:78480450-78480664 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 95, 45 |
| Conread position: | 142-344 |
| Cow position: | chr11:64090433-64090222 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 104, 64 |
| Conread position: | 144-344 |
| Cow position: | chr11:36899631-36899422 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 112, 97 |
| Conread position: | 145-346 |
| Cow position: | chr11:7334067-7333859 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 146-346 |
| Cow position: | chr11:955021-955229 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 149-343 |
| Cow position: | chr11:46451278-46451472 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 92, 117 |
| Conread position: | 149-346 |
| Cow position: | chr11:24459925-24459718 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 152-342 |
| Cow position: | chr11:7683496-7683687 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 94, 14 |
| Conread position: | 152-346 |
| Cow position: | chr11:63065321-63065520 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 97, 29 |
| Conread position: | 155-346 |
| Cow position: | chr11:32218331-32218131 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 91, 41 |
| Conread position: | 157-346 |
| Cow position: | chr11:86926254-86926064 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 31, 76 |
| Conread position: | 158-346 |
| Cow position: | chr11:73924890-73924696 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 159-344 |
| Cow position: | chr11:46748194-46748002 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 92, 20 |
| Conread position: | 162-346 |
| Cow position: | chr11:43913895-43914075 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 95, 164 |
| Conread position: | 164-339 |
| Cow position: | chr11:80761702-80761524 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 82, 32 |
| Conread position: | 165-346 |
| Cow position: | chr11:51044258-51044067 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 81, 45 |
| Conread position: | 169-346 |
| Cow position: | chr11:36848622-36848790 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 113, 83 |
| Conread position: | 171-346 |
| Cow position: | chr11:9837419-9837238 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 39, 119 |
| Conread position: | 172-345 |
| Cow position: | chr11:60302275-60302096 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 172-346 |
| Cow position: | chr11:36986645-36986828 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 74, 21 |
| Conread position: | 173-346 |
| Cow position: | chr11:32595150-32595333 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 175-346 |
| Cow position: | chr11:63166476-63166296 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 177-346 |
| Cow position: | chr11:35238516-35238695 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 179-346 |
| Cow position: | chr11:71868914-71868745 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 181-345 |
| Cow position: | chr11:25319742-25319916 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 182-346 |
| Cow position: | chr11:7315432-7315264 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 64, 12 |
| Conread position: | 189-346 |
| Cow position: | chr11:10545689-10545856 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 195-330 |
| Cow position: | chr11:37547207-37547063 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 51, 10 |
| Conread position: | 200-346 |
| Cow position: | chr11:8988519-8988364 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 204-346 |
| Cow position: | chr11:11125377-11125526 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 204-346 |
| Cow position: | chr11:48474423-48474566 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 42, 104 |
| Conread position: | 209-346 |
| Cow position: | chr11:17083578-17083434 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 209-346 |
| Cow position: | chr11:62155350-62155488 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 76, 45 |
| Conread position: | 212-346 |
| Cow position: | chr11:1362758-1362614 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 212-346 |
| Cow position: | chr11:19508019-19508159 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 24, 91 |
| Conread position: | 212-346 |
| Cow position: | chr11:32377910-32378050 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 212-346 |
| Cow position: | chr11:75748158-75748297 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 34, 23 |
| Conread position: | 213-345 |
| Cow position: | chr11:33341422-33341283 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 34, 63 |
| Conread position: | 215-346 |
| Cow position: | chr11:79728948-79728806 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 216-346 |
| Cow position: | chr11:8105509-8105645 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 30, 0 |
Show alignments to all cow chromosomes.