Cow genome map

Conread name: Ovi1-UMC-pd3ov1-003-d11

Conread position: 112-346
Cow position: chr23:12896964-12896718 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 188
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 92, 84

Conread position: 115-346
Cow position: chr23:14739098-14739332 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 182
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 9, 80

Conread position: 125-344
Cow position: chr23:35369354-35369129 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 132
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 121, 116

Conread position: 130-346
Cow position: chr23:344514-344291 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 174
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 116, 60

Conread position: 130-346
Cow position: chr23:8005916-8006123 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 166
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 116, 62

Conread position: 131-338
Cow position: chr23:39813111-39813320 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 149
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 130

Conread position: 131-342
Cow position: chr23:9734081-9734293 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 164
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 153, 121

Conread position: 131-344
Cow position: chr23:11128895-11129113 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 33

Conread position: 131-344
Cow position: chr23:13511398-13511617 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 175
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 115, 59

Conread position: 131-344
Cow position: chr23:14839070-14838859 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 162
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 128, 65

Conread position: 131-344
Cow position: chr23:15702843-15702622 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 164
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 116, 0

Conread position: 131-344
Cow position: chr23:18797041-18796805 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 175
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 65, 140

Conread position: 131-344
Cow position: chr23:20744927-20744710 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 172
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 118, 157

Conread position: 131-346
Cow position: chr23:533895-534112 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 167
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 115, 71

Conread position: 131-346
Cow position: chr23:1321529-1321315 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 164
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 115, 67

Conread position: 131-346
Cow position: chr23:1398372-1398155 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 169
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 67, 103

Conread position: 131-346
Cow position: chr23:1430138-1429911 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 131-346
Cow position: chr23:1604889-1605110 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 115, 75

Conread position: 131-346
Cow position: chr23:1700584-1700797 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 153, 71

Conread position: 131-346
Cow position: chr23:1924171-1923953 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 168
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 153, 125

Conread position: 131-346
Cow position: chr23:4293309-4293530 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 159
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 31, 72

Conread position: 131-346
Cow position: chr23:4437481-4437705 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 112, 91

Conread position: 131-346
Cow position: chr23:4636477-4636249 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 159
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 96, 0

Conread position: 131-346
Cow position: chr23:5151643-5151875 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 178
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 107, 23

Conread position: 131-346
Cow position: chr23:5162089-5162309 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 176
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 81, 63

Conread position: 131-346
Cow position: chr23:7175285-7175503 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 65

Conread position: 131-346
Cow position: chr23:7392621-7392402 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 0

Conread position: 131-346
Cow position: chr23:8698108-8698330 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 166
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 115, 79

Conread position: 131-346
Cow position: chr23:8911141-8911357 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 27

Conread position: 131-346
Cow position: chr23:9595167-9594947 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 166
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 105, 118

Conread position: 131-346
Cow position: chr23:10554349-10554125 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 0

Conread position: 131-346
Cow position: chr23:18802611-18802390 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 172
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 115, 0

Conread position: 131-346
Cow position: chr23:22298354-22298135 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 171
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 115, 110

Conread position: 131-346
Cow position: chr23:24509365-24509585 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 173
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 118, 110

Conread position: 131-346
Cow position: chr23:25363005-25363231 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 168
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 115, 0

Conread position: 131-346
Cow position: chr23:26986618-26986388 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 168
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 74, 0

Conread position: 131-346
Cow position: chr23:27564032-27563826 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 115, 22

Conread position: 131-346
Cow position: chr23:29441338-29441113 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 171
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 115, 128

Conread position: 131-346
Cow position: chr23:29824402-29824179 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 172
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 93, 125

Conread position: 131-346
Cow position: chr23:31354009-31354234 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 125, 0

Conread position: 131-346
Cow position: chr23:37065503-37065724 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 178
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 115, 26

Conread position: 131-346
Cow position: chr23:40777925-40778149 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 174
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 118, 110

Conread position: 132-344
Cow position: chr23:5691091-5690876 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 146, 130

Conread position: 132-344
Cow position: chr23:40780991-40781207 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 168
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 114, 97

Conread position: 132-345
Cow position: chr23:18371244-18371036 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 160
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 50, 123

Conread position: 132-345
Cow position: chr23:39049749-39049541 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 120, 81

Conread position: 132-346
Cow position: chr23:406494-406284 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 165
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 176, 13

Conread position: 132-346
Cow position: chr23:1131768-1131992 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 163
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 115, 0

Conread position: 132-346
Cow position: chr23:2371043-2371258 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 164
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 73, 114

Conread position: 132-346
Cow position: chr23:3167906-3168132 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 164
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 112, 0

Conread position: 132-346
Cow position: chr23:9268253-9268476 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 171
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 114, 109

Conread position: 132-346
Cow position: chr23:11973524-11973746 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 155
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 114, 63

Conread position: 132-346
Cow position: chr23:14896132-14895917 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 160
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 127, 35

Conread position: 132-346
Cow position: chr23:15003668-15003883 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 152
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 79, 35

Conread position: 132-346
Cow position: chr23:20001739-20001948 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 159
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 127, 154

Conread position: 132-346
Cow position: chr23:23470614-23470824 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 73, 118

Conread position: 132-346
Cow position: chr23:26322762-26322549 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 154
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 114, 156

Conread position: 132-346
Cow position: chr23:32309344-32309563 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 168
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 114, 168

Conread position: 132-346
Cow position: chr23:39752777-39753001 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 172
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 114, 0

Conread position: 132-346
Cow position: chr23:40526309-40526086 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 168
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 72, 125

Conread position: 132-346
Cow position: chr23:41472278-41472497 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 147, 72

Conread position: 133-344
Cow position: chr23:18322753-18322535 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 172
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 113, 46

Conread position: 133-345
Cow position: chr23:11473842-11473622 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 168
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 113, 19

Conread position: 133-346
Cow position: chr23:6995302-6995095 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 161
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 171, 61

Conread position: 133-346
Cow position: chr23:7402370-7402585 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 164
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 113, 153

Conread position: 133-346
Cow position: chr23:20586048-20585832 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 168
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 115, 148

Conread position: 133-346
Cow position: chr23:34315304-34315082 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 168
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 71, 96

Conread position: 133-346
Cow position: chr23:38455521-38455299 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 175
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 113, 0

Conread position: 133-346
Cow position: chr23:41285600-41285808 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 166
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 129, 53

Conread position: 135-346
Cow position: chr23:10014214-10014422 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 152
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 111, 61

Conread position: 135-346
Cow position: chr23:25883345-25883563 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 114, 61

Conread position: 135-346
Cow position: chr23:37190910-37190695 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 153
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 101, 77

Conread position: 139-344
Cow position: chr23:11404596-11404376 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 154
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 152-346
Cow position: chr23:39309431-39309232 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 160
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 94, 48

Conread position: 154-346
Cow position: chr23:4980853-4980662 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 147
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 14, 46

Conread position: 156-344
Cow position: chr23:587083-587280 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 155
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 88, 38

Conread position: 158-346
Cow position: chr23:1610531-1610738 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 158
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 54, 122

Conread position: 158-346
Cow position: chr23:6593013-6592820 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 147
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 40, 92

Conread position: 163-346
Cow position: chr23:1545909-1546098 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 19, 73

Conread position: 163-346
Cow position: chr23:3247285-3247468 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 83, 31

Conread position: 166-338
Cow position: chr23:20605584-20605399 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 141
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 86, 0

Conread position: 167-346
Cow position: chr23:13599046-13599228 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 82, 54

Conread position: 171-344
Cow position: chr23:27862030-27862212 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 32, 82

Conread position: 171-344
Cow position: chr23:35366396-35366217 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 75, 70

Conread position: 176-345
Cow position: chr23:36309134-36309303 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 83, 73

Conread position: 190-343
Cow position: chr23:3918377-3918218 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 194-346
Cow position: chr23:3262774-3262613 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 194-346
Cow position: chr23:8918128-8917968 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 52, 144

Conread position: 201-346
Cow position: chr23:1803525-1803676 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 10, 54

Conread position: 204-346
Cow position: chr23:11209744-11209894 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 42, 140

Conread position: 207-346
Cow position: chr23:5617317-5617459 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 77, 38

Show alignments to all cow chromosomes.