Cow genome map

Conread name: Ovi1-UMC-pd3ov1-003-d11

Conread position: 107-346
Cow position: chr25:12817008-12817255 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 182
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 6, 20

Conread position: 112-346
Cow position: chr25:9055844-9056068 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 168
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 142, 91

Conread position: 115-346
Cow position: chr25:26523619-26523844 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 170
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 21, 147

Conread position: 125-346
Cow position: chr25:21245954-21245728 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 116

Conread position: 129-344
Cow position: chr25:17354035-17354253 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 167
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 87, 161

Conread position: 129-344
Cow position: chr25:21950782-21951003 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 163
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 120, 0

Conread position: 129-346
Cow position: chr25:23829453-23829240 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 168
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 117, 23

Conread position: 130-346
Cow position: chr25:35347560-35347787 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 173
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 72, 28

Conread position: 131-280
Cow position: chr25:14720143-14720292 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 85, 27

Conread position: 131-342
Cow position: chr25:17119527-17119314 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 160
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 115, 0

Conread position: 131-344
Cow position: chr25:1096235-1096455 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 168
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 115, 0

Conread position: 131-344
Cow position: chr25:3992448-3992671 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 172
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 115, 0

Conread position: 131-345
Cow position: chr25:11051041-11051256 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 169
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 153, 114

Conread position: 131-345
Cow position: chr25:11662157-11661938 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 170
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 115, 70

Conread position: 131-345
Cow position: chr25:18155254-18155478 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 169
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 116, 0

Conread position: 131-345
Cow position: chr25:33256028-33256246 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 170
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 33, 52

Conread position: 131-346
Cow position: chr25:1837901-1838116 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 165
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 115, 64

Conread position: 131-346
Cow position: chr25:2110742-2110956 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 172
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 116, 36

Conread position: 131-346
Cow position: chr25:2414495-2414698 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 65, 0

Conread position: 131-346
Cow position: chr25:3145504-3145723 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 165
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 134, 130

Conread position: 131-346
Cow position: chr25:4049693-4049910 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 115, 24

Conread position: 131-346
Cow position: chr25:4548064-4547837 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 164
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 40, 72

Conread position: 131-346
Cow position: chr25:5847137-5846924 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 164
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 128, 61

Conread position: 131-346
Cow position: chr25:7216480-7216710 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 172
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 35, 0

Conread position: 131-346
Cow position: chr25:7445812-7446031 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 165
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 115, 10

Conread position: 131-346
Cow position: chr25:7641790-7641571 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 164
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 128, 27

Conread position: 131-346
Cow position: chr25:7800794-7801019 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 115, 0

Conread position: 131-346
Cow position: chr25:9396113-9396329 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 153, 104

Conread position: 131-346
Cow position: chr25:9842663-9842883 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 172
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 105, 65

Conread position: 131-346
Cow position: chr25:11585171-11585401 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 175
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 94, 22

Conread position: 131-346
Cow position: chr25:11830236-11830021 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 166
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 118, 22

Conread position: 131-346
Cow position: chr25:11956485-11956708 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 159
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 106, 125

Conread position: 131-346
Cow position: chr25:14791414-14791633 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 172
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 115, 65

Conread position: 131-346
Cow position: chr25:16866896-16867112 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 167
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 153, 31

Conread position: 131-346
Cow position: chr25:17658273-17658492 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 110

Conread position: 131-346
Cow position: chr25:18564151-18564368 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 168
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 15, 158

Conread position: 131-346
Cow position: chr25:20403061-20402837 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 173
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 115, 110

Conread position: 131-346
Cow position: chr25:23389614-23389401 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 168
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 154, 65

Conread position: 131-346
Cow position: chr25:24727127-24726904 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 171
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 115, 17

Conread position: 131-346
Cow position: chr25:26087174-26087398 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 175
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 115, 33

Conread position: 131-346
Cow position: chr25:26238527-26238750 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 131-346
Cow position: chr25:26353104-26352883 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 122, 73

Conread position: 131-346
Cow position: chr25:30319791-30319570 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 0

Conread position: 131-346
Cow position: chr25:35339993-35340211 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 162
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 116, 60

Conread position: 131-346
Cow position: chr25:40957328-40957109 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 162
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 104, 127

Conread position: 132-341
Cow position: chr25:4188397-4188175 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 157
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 73, 56

Conread position: 132-345
Cow position: chr25:33025421-33025206 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 152
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 97, 80

Conread position: 132-346
Cow position: chr25:1735651-1735433 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 169
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 114, 72

Conread position: 132-346
Cow position: chr25:4488395-4488608 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 168
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 110, 61

Conread position: 132-346
Cow position: chr25:6891868-6891646 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 175
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 73, 164

Conread position: 132-346
Cow position: chr25:6894153-6894365 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 154
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 75, 37

Conread position: 132-346
Cow position: chr25:10137766-10137977 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 174
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 114, 64

Conread position: 132-346
Cow position: chr25:12235097-12234879 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 160
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 116, 72

Conread position: 132-346
Cow position: chr25:12359865-12360089 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 157
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 109, 127

Conread position: 132-346
Cow position: chr25:15273349-15273568 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 0

Conread position: 132-346
Cow position: chr25:21193284-21193061 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 166
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 109, 0

Conread position: 132-346
Cow position: chr25:23410324-23410542 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 164
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 91, 61

Conread position: 132-346
Cow position: chr25:25827120-25827345 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 175
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 84, 127

Conread position: 132-346
Cow position: chr25:36761775-36761985 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 114, 35

Conread position: 133-345
Cow position: chr25:10643648-10643428 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 169
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 113, 56

Conread position: 133-346
Cow position: chr25:21209286-21209065 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 170
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 116, 64

Conread position: 134-346
Cow position: chr25:5514670-5514889 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 173
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 125, 59

Conread position: 134-346
Cow position: chr25:10407757-10407535 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 169
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 112, 0

Conread position: 134-346
Cow position: chr25:16560929-16560713 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 158
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 152, 0

Conread position: 134-346
Cow position: chr25:17682113-17681895 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 161
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 123, 0

Conread position: 135-346
Cow position: chr25:12239474-12239269 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 165
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 150, 16

Conread position: 135-346
Cow position: chr25:20650928-20651150 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 160
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 107, 0

Conread position: 137-346
Cow position: chr25:787936-788144 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 162
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 112, 59

Conread position: 137-346
Cow position: chr25:26225375-26225162 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 159
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 110, 104

Conread position: 138-346
Cow position: chr25:36037125-36036901 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 166
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 62, 0

Conread position: 140-346
Cow position: chr25:6803231-6803432 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 155
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 120, 108

Conread position: 145-346
Cow position: chr25:15694655-15694861 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 158
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 91, 161

Conread position: 146-346
Cow position: chr25:18448514-18448720 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 157
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 103, 57

Conread position: 149-346
Cow position: chr25:6424905-6424705 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 159
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 93, 33

Conread position: 151-346
Cow position: chr25:20460809-20461006 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 158
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 90, 42

Conread position: 154-346
Cow position: chr25:27821091-27821294 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 60, 0

Conread position: 157-346
Cow position: chr25:13708701-13708892 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 150
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 91, 102

Conread position: 161-346
Cow position: chr25:18968960-18969155 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 88, 98

Conread position: 173-346
Cow position: chr25:25948695-25948520 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 73, 86

Conread position: 176-346
Cow position: chr25:15319622-15319799 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 142
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 28, 67

Conread position: 183-346
Cow position: chr25:21895177-21895007 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 137
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 20, 53

Conread position: 190-345
Cow position: chr25:10330677-10330520 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 128
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 94, 58

Conread position: 198-346
Cow position: chr25:36081600-36081756 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 48, 21

Conread position: 207-346
Cow position: chr25:24452434-24452289 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 42, 28

Conread position: 208-346
Cow position: chr25:26700775-26700916 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 51, 33

Conread position: 209-346
Cow position: chr25:18075405-18075551 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 210-346
Cow position: chr25:12778797-12778649 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 212-346
Cow position: chr25:19679081-19679225 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 214-346
Cow position: chr25:12117245-12117109 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 45, 34

Show alignments to all cow chromosomes.