Cow genome map
| Conread name: | Ovi1-UMC-pd3ov1-003-d11 |
| Conread position: | 126-346 |
| Cow position: | chr26:5685108-5685341 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 129-346 |
| Cow position: | chr26:2531499-2531283 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 116, 87 |
| Conread position: | 129-346 |
| Cow position: | chr26:30752189-30751966 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 175 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 61, 53 |
| Conread position: | 131-336 |
| Cow position: | chr26:12894167-12893961 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 115, 110 |
| Conread position: | 131-344 |
| Cow position: | chr26:20292005-20291786 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 131-345 |
| Cow position: | chr26:15857356-15857577 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 175 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 115, 65 |
| Conread position: | 131-346 |
| Cow position: | chr26:6447925-6447703 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 115, 28 |
| Conread position: | 131-346 |
| Cow position: | chr26:8307836-8307613 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 35, 119 |
| Conread position: | 131-346 |
| Cow position: | chr26:8897213-8896988 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 116, 128 |
| Conread position: | 131-346 |
| Cow position: | chr26:9100074-9099862 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 115, 81 |
| Conread position: | 131-346 |
| Cow position: | chr26:11263321-11263539 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 115, 19 |
| Conread position: | 131-346 |
| Cow position: | chr26:11370609-11370832 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 131-346 |
| Cow position: | chr26:13271001-13270776 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 131-346 |
| Cow position: | chr26:13706311-13706106 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 130, 71 |
| Conread position: | 131-346 |
| Cow position: | chr26:16783489-16783722 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 73, 155 |
| Conread position: | 131-346 |
| Cow position: | chr26:20256522-20256739 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 174 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 82, 179 |
| Conread position: | 131-346 |
| Cow position: | chr26:22180182-22180402 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 115, 35 |
| Conread position: | 131-346 |
| Cow position: | chr26:26671065-26670849 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 117 |
| Conread position: | 131-346 |
| Cow position: | chr26:30806835-30806610 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 131-346 |
| Cow position: | chr26:32380982-32381203 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 127, 23 |
| Conread position: | 131-346 |
| Cow position: | chr26:32653052-32652828 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 49, 120 |
| Conread position: | 131-346 |
| Cow position: | chr26:33112703-33112484 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 128, 57 |
| Conread position: | 131-346 |
| Cow position: | chr26:33202381-33202157 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 132-342 |
| Cow position: | chr26:19537178-19537401 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 132-344 |
| Cow position: | chr26:4664749-4664533 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 116, 71 |
| Conread position: | 132-345 |
| Cow position: | chr26:29353834-29353610 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 132-346 |
| Cow position: | chr26:13021472-13021247 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 132-346 |
| Cow position: | chr26:26888455-26888232 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 117, 64 |
| Conread position: | 132-346 |
| Cow position: | chr26:31889769-31889991 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 125, 69 |
| Conread position: | 132-346 |
| Cow position: | chr26:32553359-32553577 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 114, 207 |
| Conread position: | 133-344 |
| Cow position: | chr26:3706482-3706700 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 113, 64 |
| Conread position: | 133-346 |
| Cow position: | chr26:22711820-22712038 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 113, 10 |
| Conread position: | 134-346 |
| Cow position: | chr26:8503941-8504160 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 123, 90 |
| Conread position: | 135-346 |
| Cow position: | chr26:3755922-3756131 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 70, 85 |
| Conread position: | 135-346 |
| Cow position: | chr26:6837492-6837709 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 113, 124 |
| Conread position: | 135-346 |
| Cow position: | chr26:27163122-27163349 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 136-346 |
| Cow position: | chr26:25393715-25393929 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 110, 27 |
| Conread position: | 137-346 |
| Cow position: | chr26:9867445-9867219 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 66, 188 |
| Conread position: | 141-345 |
| Cow position: | chr26:3182251-3182048 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 105, 45 |
| Conread position: | 141-346 |
| Cow position: | chr26:7525791-7525570 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 148-346 |
| Cow position: | chr26:6497950-6498158 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 98, 111 |
| Conread position: | 151-346 |
| Cow position: | chr26:27491805-27491603 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 133, 66 |
| Conread position: | 165-346 |
| Cow position: | chr26:34847457-34847640 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 81, 31 |
| Conread position: | 166-346 |
| Cow position: | chr26:16549695-16549883 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 75, 30 |
| Conread position: | 172-346 |
| Cow position: | chr26:32013348-32013526 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 70, 140 |
| Conread position: | 187-346 |
| Cow position: | chr26:26466985-26466823 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 59, 54 |
| Conread position: | 195-345 |
| Cow position: | chr26:32026619-32026472 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 90, 47 |
| Conread position: | 204-343 |
| Cow position: | chr26:23097428-23097283 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 206-346 |
| Cow position: | chr26:32898119-32897973 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 40, 0 |
Show alignments to all cow chromosomes.