Cow genome map

Conread name: Ovi1-UMC-pd3ov1-003-d11

Conread position: 128-345
Cow position: chr27:28207097-28206870 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 169
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 118, 0

Conread position: 129-346
Cow position: chr27:16099719-16099950 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 167
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 71, 0

Conread position: 129-346
Cow position: chr27:17473120-17472888 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 166
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 75, 32

Conread position: 129-346
Cow position: chr27:22418469-22418692 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 165
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 111, 77

Conread position: 129-346
Cow position: chr27:23632894-23632673 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 166
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 128, 20

Conread position: 129-346
Cow position: chr27:30561214-30560988 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 172
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 84, 133

Conread position: 131-340
Cow position: chr27:26785686-26785894 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 157
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 128, 83

Conread position: 131-341
Cow position: chr27:2900945-2901162 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 167
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 115, 0

Conread position: 131-342
Cow position: chr27:11413011-11412800 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 163
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 153, 18

Conread position: 131-342
Cow position: chr27:15858795-15859011 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 164
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 128, 0

Conread position: 131-343
Cow position: chr27:27064148-27064365 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 154
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 115, 57

Conread position: 131-344
Cow position: chr27:8062066-8062282 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 164
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 128, 65

Conread position: 131-344
Cow position: chr27:13198201-13197990 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 165
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 128, 11

Conread position: 131-344
Cow position: chr27:16787128-16786900 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 173
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 73, 0

Conread position: 131-344
Cow position: chr27:22426533-22426751 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 162
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 27, 123

Conread position: 131-344
Cow position: chr27:29799238-29799021 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 158
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 115, 41

Conread position: 131-345
Cow position: chr27:16823106-16822890 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 156
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 115, 36

Conread position: 131-346
Cow position: chr27:264542-264324 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 168
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 128, 65

Conread position: 131-346
Cow position: chr27:815661-815441 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 164
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 116, 171

Conread position: 131-346
Cow position: chr27:1123313-1123106 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 115, 19

Conread position: 131-346
Cow position: chr27:4824820-4825038 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 155
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 65, 160

Conread position: 131-346
Cow position: chr27:4829519-4829728 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 158
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 126, 7

Conread position: 131-346
Cow position: chr27:6074212-6073996 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 162
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 127, 155

Conread position: 131-346
Cow position: chr27:6674531-6674311 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 170
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 153, 36

Conread position: 131-346
Cow position: chr27:12240020-12240241 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 160
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 110, 0

Conread position: 131-346
Cow position: chr27:13317669-13317883 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 174
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 118, 73

Conread position: 131-346
Cow position: chr27:15866517-15866299 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 90

Conread position: 131-346
Cow position: chr27:17397159-17397375 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 168
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 149, 73

Conread position: 131-346
Cow position: chr27:19423500-19423275 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 125, 0

Conread position: 131-346
Cow position: chr27:20066066-20066282 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 78, 151

Conread position: 131-346
Cow position: chr27:22035081-22035302 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 171
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 115, 34

Conread position: 131-346
Cow position: chr27:22171594-22171375 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 172
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 86, 27

Conread position: 131-346
Cow position: chr27:22440438-22440212 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 176
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 106, 0

Conread position: 131-346
Cow position: chr27:23472544-23472327 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 167
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 107, 20

Conread position: 131-346
Cow position: chr27:25411219-25411442 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 175
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 73, 160

Conread position: 131-346
Cow position: chr27:26427832-26428057 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 175
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 115, 0

Conread position: 131-346
Cow position: chr27:26999129-26999344 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 115, 48

Conread position: 131-346
Cow position: chr27:27040893-27040683 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 159
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 112, 47

Conread position: 131-346
Cow position: chr27:27141888-27141669 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 170
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 128, 110

Conread position: 131-346
Cow position: chr27:28276565-28276345 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 154
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 115, 32

Conread position: 132-311
Cow position: chr27:15761827-15761650 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 127
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 145, 156

Conread position: 132-340
Cow position: chr27:16620283-16620069 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 169
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 114, 64

Conread position: 132-346
Cow position: chr27:6454508-6454286 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 165
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 116, 97

Conread position: 132-346
Cow position: chr27:9090506-9090728 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 178
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 117, 213

Conread position: 132-346
Cow position: chr27:10384307-10384531 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 165
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 114, 0

Conread position: 132-346
Cow position: chr27:10986794-10987009 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 152
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 114, 71

Conread position: 132-346
Cow position: chr27:13860450-13860668 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 158
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 114, 64

Conread position: 132-346
Cow position: chr27:14670086-14670309 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 168
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 36, 111

Conread position: 132-346
Cow position: chr27:18922745-18922526 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 109

Conread position: 132-346
Cow position: chr27:28189922-28190142 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 168
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 118, 0

Conread position: 132-346
Cow position: chr27:30677194-30676985 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 162
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 41, 57

Conread position: 133-346
Cow position: chr27:1768344-1768552 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 168
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 113, 63

Conread position: 133-346
Cow position: chr27:24445862-24446083 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 0

Conread position: 133-346
Cow position: chr27:25380291-25380068 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 166
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 44, 132

Conread position: 133-346
Cow position: chr27:27521710-27521933 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 177
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 113, 126

Conread position: 133-346
Cow position: chr27:31371999-31372216 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 156
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 113, 0

Conread position: 134-340
Cow position: chr27:22394462-22394249 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 160
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 112, 68

Conread position: 134-342
Cow position: chr27:27019810-27020023 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 162
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 116, 62

Conread position: 134-346
Cow position: chr27:15319744-15319522 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 156
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 112, 49

Conread position: 134-346
Cow position: chr27:21408257-21408481 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 167
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 79, 19

Conread position: 134-346
Cow position: chr27:25970801-25970583 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 112, 107

Conread position: 135-346
Cow position: chr27:13876020-13875806 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 168
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 144, 92

Conread position: 135-346
Cow position: chr27:15272198-15271986 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 165
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 111, 163

Conread position: 136-346
Cow position: chr27:23882074-23882302 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 167
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 62, 145

Conread position: 137-346
Cow position: chr27:26919623-26919827 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 156
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 109, 89

Conread position: 140-346
Cow position: chr27:28931502-28931716 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 165
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 21, 57

Conread position: 141-346
Cow position: chr27:13409882-13410098 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 154
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 108, 0

Conread position: 146-346
Cow position: chr27:28518558-28518365 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 150
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 115, 29

Conread position: 155-346
Cow position: chr27:12429684-12429478 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 156
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 46, 90

Conread position: 156-346
Cow position: chr27:20067716-20067903 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 92, 48

Conread position: 158-346
Cow position: chr27:31372711-31372900 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 148
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 88, 54

Conread position: 159-342
Cow position: chr27:7412651-7412458 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 152
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 87, 0

Conread position: 159-346
Cow position: chr27:2643670-2643850 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 99, 53

Conread position: 163-346
Cow position: chr27:11815495-11815684 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 83, 0

Conread position: 165-345
Cow position: chr27:31147410-31147598 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 12, 0

Conread position: 168-346
Cow position: chr27:27843734-27843921 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 144
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 78, 7

Conread position: 170-346
Cow position: chr27:16263590-16263415 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 46, 60

Conread position: 170-346
Cow position: chr27:26508904-26509085 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 112, 84

Conread position: 171-346
Cow position: chr27:22293456-22293635 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 141
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 75, 141

Conread position: 174-346
Cow position: chr27:12516450-12516270 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 75, 38

Conread position: 175-346
Cow position: chr27:2930344-2930521 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 71, 0

Conread position: 175-346
Cow position: chr27:30890538-30890362 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 71, 31

Conread position: 177-346
Cow position: chr27:24014491-24014665 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 82, 0

Conread position: 186-346
Cow position: chr27:22220795-22220625 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 63, 0

Conread position: 187-346
Cow position: chr27:6541865-6541704 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 118
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 63, 100

Conread position: 188-344
Cow position: chr27:14902410-14902574 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 58, 47

Conread position: 190-346
Cow position: chr27:6500302-6500136 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 190-346
Cow position: chr27:26440821-26440985 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 46, 35

Conread position: 204-346
Cow position: chr27:13638769-13638917 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 42, 55

Conread position: 204-346
Cow position: chr27:27259831-27259684 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 43, 37

Conread position: 206-346
Cow position: chr27:20796005-20795862 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 40, 101

Conread position: 212-346
Cow position: chr27:20553932-20553795 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 37, 119

Conread position: 220-346
Cow position: chr27:1498521-1498392 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 26, 0

Show alignments to all cow chromosomes.