Cow genome map

Conread name: Ovi1-UMC-pd3ov1-003-d11

Conread position: 74-346
Cow position: chr28:15272653-15272374 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 207
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 36, 19

Conread position: 114-280
Cow position: chr28:22344355-22344521 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 138, 143

Conread position: 123-346
Cow position: chr28:7590525-7590295 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 175
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 51, 61

Conread position: 123-346
Cow position: chr28:18717467-18717235 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 175
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 129, 93

Conread position: 129-346
Cow position: chr28:3144223-3144005 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 67

Conread position: 131-341
Cow position: chr28:26922704-26922485 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 165
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 72, 36

Conread position: 131-344
Cow position: chr28:3750985-3751202 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 171
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 128, 177

Conread position: 131-344
Cow position: chr28:10589363-10589160 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 171
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 115, 129

Conread position: 131-344
Cow position: chr28:21363424-21363631 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 157
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 117, 0

Conread position: 131-345
Cow position: chr28:24966054-24966277 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 156
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 128, 198

Conread position: 131-346
Cow position: chr28:3024243-3024025 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 175
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 115, 65

Conread position: 131-346
Cow position: chr28:4070631-4070856 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 170
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 88, 11

Conread position: 131-346
Cow position: chr28:5792368-5792587 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 175
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 37, 68

Conread position: 131-346
Cow position: chr28:6971673-6971457 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 166
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 115, 110

Conread position: 131-346
Cow position: chr28:7268267-7268049 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 166
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 116, 56

Conread position: 131-346
Cow position: chr28:7685010-7684792 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 169
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 127, 32

Conread position: 131-346
Cow position: chr28:7698311-7698094 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 169
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 115, 49

Conread position: 131-346
Cow position: chr28:8911554-8911329 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 173
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 56, 129

Conread position: 131-346
Cow position: chr28:9285697-9285487 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 115, 11

Conread position: 131-346
Cow position: chr28:10295857-10296080 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 170
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 25, 66

Conread position: 131-346
Cow position: chr28:10879440-10879654 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 162
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 66, 129

Conread position: 131-346
Cow position: chr28:11426870-11426655 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 167
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 128, 36

Conread position: 131-346
Cow position: chr28:11733459-11733234 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 167
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 115, 130

Conread position: 131-346
Cow position: chr28:11752479-11752254 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 166
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 118, 0

Conread position: 131-346
Cow position: chr28:11931720-11931495 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 115, 0

Conread position: 131-346
Cow position: chr28:12049047-12048813 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 174
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 73, 124

Conread position: 131-346
Cow position: chr28:13267447-13267672 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 178
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 95, 57

Conread position: 131-346
Cow position: chr28:13356916-13356703 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 65

Conread position: 131-346
Cow position: chr28:14657363-14657587 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 166
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 74, 10

Conread position: 131-346
Cow position: chr28:14933628-14933852 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 179
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 131, 110

Conread position: 131-346
Cow position: chr28:16084993-16085210 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 170
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 118, 9

Conread position: 131-346
Cow position: chr28:16211431-16211205 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 178
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 118, 0

Conread position: 131-346
Cow position: chr28:16388317-16388518 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 164
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 127, 32

Conread position: 131-346
Cow position: chr28:16441056-16441269 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 170
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 115, 65

Conread position: 131-346
Cow position: chr28:20760257-20760033 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 171
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 115, 32

Conread position: 131-346
Cow position: chr28:21104178-21103958 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 166
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 118, 65

Conread position: 131-346
Cow position: chr28:21129457-21129239 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 153
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 131, 114

Conread position: 131-346
Cow position: chr28:21868117-21868342 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 172
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 76, 111

Conread position: 131-346
Cow position: chr28:22171063-22170831 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 176
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 43, 72

Conread position: 131-346
Cow position: chr28:22279518-22279308 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 161
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 23, 65

Conread position: 131-346
Cow position: chr28:23675814-23676027 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 150
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 115, 62

Conread position: 131-346
Cow position: chr28:23793653-23793416 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 175
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 69, 128

Conread position: 131-346
Cow position: chr28:26781749-26781974 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 165
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 116, 0

Conread position: 131-346
Cow position: chr28:30327418-30327204 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 159
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 72, 158

Conread position: 132-342
Cow position: chr28:7549395-7549176 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 175
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 114, 109

Conread position: 132-346
Cow position: chr28:2814831-2814613 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 156
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 114, 31

Conread position: 132-346
Cow position: chr28:4046814-4047030 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 150
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 165, 101

Conread position: 132-346
Cow position: chr28:10642349-10642131 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 168
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 110, 64

Conread position: 132-346
Cow position: chr28:12430274-12430494 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 172
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 26, 91

Conread position: 132-346
Cow position: chr28:12942059-12942262 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 148
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 132-346
Cow position: chr28:13693416-13693637 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 163
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 111, 0

Conread position: 132-346
Cow position: chr28:25563745-25563967 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 168
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 79, 64

Conread position: 132-346
Cow position: chr28:25727048-25727264 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 162
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 153, 122

Conread position: 132-346
Cow position: chr28:31972085-31971869 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 161
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 79, 127

Conread position: 133-346
Cow position: chr28:3479933-3480156 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 170
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 72, 0

Conread position: 133-346
Cow position: chr28:8372139-8372361 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 172
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 113, 72

Conread position: 134-324
Cow position: chr28:12593304-12593497 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 150
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 118, 123

Conread position: 134-345
Cow position: chr28:28766240-28766020 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 162
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 113, 18

Conread position: 134-346
Cow position: chr28:11924150-11923926 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 164
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 69, 0

Conread position: 134-346
Cow position: chr28:14150907-14151121 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 171
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 112, 52

Conread position: 134-346
Cow position: chr28:15600933-15601147 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 164
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 125, 107

Conread position: 134-346
Cow position: chr28:17316533-17316750 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 178
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 112, 47

Conread position: 134-346
Cow position: chr28:22372006-22371790 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 158
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 150, 30

Conread position: 135-337
Cow position: chr28:10977534-10977744 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 163
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 111, 0

Conread position: 135-344
Cow position: chr28:7503507-7503727 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 166
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 63, 125

Conread position: 135-345
Cow position: chr28:14675177-14675394 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 158
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 112, 58

Conread position: 136-346
Cow position: chr28:15677571-15677780 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 147
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 123, 62

Conread position: 137-346
Cow position: chr28:4536143-4536343 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 158
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 112, 27

Conread position: 140-346
Cow position: chr28:19222919-19222711 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 168
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 106, 63

Conread position: 142-346
Cow position: chr28:7512913-7512701 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 38, 55

Conread position: 146-346
Cow position: chr28:7751619-7751410 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 162
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 100, 21

Conread position: 147-346
Cow position: chr28:10888345-10888554 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 163
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 99, 0

Conread position: 158-346
Cow position: chr28:16879572-16879387 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 148
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 88, 38

Conread position: 166-346
Cow position: chr28:23008027-23007847 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 91, 123

Conread position: 168-344
Cow position: chr28:14234680-14234857 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 91, 35

Conread position: 168-346
Cow position: chr28:6546687-6546496 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 66, 94

Conread position: 172-344
Cow position: chr28:7228677-7228498 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 23, 84

Conread position: 183-346
Cow position: chr28:26784750-26784580 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 22, 77

Conread position: 194-346
Cow position: chr28:5128998-5128839 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 90, 64

Conread position: 200-346
Cow position: chr28:16386771-16386623 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 87

Conread position: 204-346
Cow position: chr28:5773381-5773526 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 54, 41

Conread position: 208-346
Cow position: chr28:6307635-6307776 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 209-346
Cow position: chr28:32813255-32813113 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 40, 63

Conread position: 210-346
Cow position: chr28:2905326-2905467 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 36, 6

Conread position: 211-346
Cow position: chr28:25596378-25596519 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 216-342
Cow position: chr28:2898746-2898878 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 30, 0

Show alignments to all cow chromosomes.