Cow genome map

Conread name: Ovi1-UMC-pd3ov1-003-d11

Conread position: 107-346
Cow position: chr29:4625358-4625116 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 147
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 139, 0

Conread position: 113-346
Cow position: chr29:40096605-40096840 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 182
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 11, 128

Conread position: 114-346
Cow position: chr29:19428315-19428538 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 160
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 80, 0

Conread position: 123-318
Cow position: chr29:10674665-10674865 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 123, 134

Conread position: 128-344
Cow position: chr29:6014753-6014979 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 171
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 78, 0

Conread position: 128-346
Cow position: chr29:35291754-35291970 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 168
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 36, 155

Conread position: 129-338
Cow position: chr29:35501988-35501779 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 169
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 120, 69

Conread position: 129-344
Cow position: chr29:26519802-26519589 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 168
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 117, 25

Conread position: 129-344
Cow position: chr29:32308667-32308445 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 168
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 113, 0

Conread position: 129-346
Cow position: chr29:87356-87138 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 179
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 150, 50

Conread position: 129-346
Cow position: chr29:2744615-2744392 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 171
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 117, 0

Conread position: 130-346
Cow position: chr29:4480516-4480292 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 171
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 74, 113

Conread position: 131-335
Cow position: chr29:8164207-8163988 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 161
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 17, 37

Conread position: 131-343
Cow position: chr29:1325100-1325318 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 161
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 153, 110

Conread position: 131-343
Cow position: chr29:12005105-12004892 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 161
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 115, 110

Conread position: 131-344
Cow position: chr29:42848889-42849101 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 154
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 119, 61

Conread position: 131-345
Cow position: chr29:6293805-6293597 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 165
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 115, 65

Conread position: 131-345
Cow position: chr29:40337873-40337648 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 165
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 31, 0

Conread position: 131-346
Cow position: chr29:686532-686312 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 110

Conread position: 131-346
Cow position: chr29:732285-732499 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 164
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 154, 77

Conread position: 131-346
Cow position: chr29:2837399-2837174 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 168
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 20, 14

Conread position: 131-346
Cow position: chr29:4201778-4202001 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 171
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 116, 211

Conread position: 131-346
Cow position: chr29:5892509-5892728 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 174
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 115, 65

Conread position: 131-346
Cow position: chr29:7666370-7666151 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 168
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 115, 104

Conread position: 131-346
Cow position: chr29:8125934-8125711 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 170
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 127, 114

Conread position: 131-346
Cow position: chr29:9686350-9686122 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 171
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 65, 177

Conread position: 131-346
Cow position: chr29:13403324-13403548 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 169
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 117, 104

Conread position: 131-346
Cow position: chr29:14888780-14889004 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 171
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 115, 128

Conread position: 131-346
Cow position: chr29:16609399-16609621 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 168
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 115, 50

Conread position: 131-346
Cow position: chr29:17668165-17668379 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 161
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 148, 96

Conread position: 131-346
Cow position: chr29:18748922-18748703 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 174
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 154, 67

Conread position: 131-346
Cow position: chr29:21665634-21665850 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 163
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 115, 69

Conread position: 131-346
Cow position: chr29:25088394-25088633 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 182
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 69, 0

Conread position: 131-346
Cow position: chr29:26289427-26289207 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 150
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 116, 0

Conread position: 131-346
Cow position: chr29:26771085-26771316 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 164
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 41, 0

Conread position: 131-346
Cow position: chr29:28621611-28621396 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 162
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 115, 80

Conread position: 131-346
Cow position: chr29:28637402-28637183 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 162
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 118, 65

Conread position: 131-346
Cow position: chr29:28868290-28868516 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 172
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 111, 0

Conread position: 131-346
Cow position: chr29:29066086-29066306 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 176
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 115, 47

Conread position: 131-346
Cow position: chr29:29632278-29632053 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 173
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 113, 0

Conread position: 131-346
Cow position: chr29:30433340-30433563 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 164
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 115, 35

Conread position: 131-346
Cow position: chr29:32800048-32799832 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 171
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 77, 160

Conread position: 131-346
Cow position: chr29:35281162-35281376 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 163
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 105, 124

Conread position: 131-346
Cow position: chr29:36216778-36216997 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 171
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 115, 69

Conread position: 131-346
Cow position: chr29:38229892-38230117 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 116, 0

Conread position: 131-346
Cow position: chr29:38581628-38581855 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 172
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 115, 110

Conread position: 131-346
Cow position: chr29:40903060-40902840 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 171
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 127, 0

Conread position: 131-346
Cow position: chr29:45650679-45650464 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 168
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 115, 30

Conread position: 132-314
Cow position: chr29:9864405-9864593 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 74, 116

Conread position: 132-344
Cow position: chr29:19761935-19762154 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 171
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 125, 73

Conread position: 132-344
Cow position: chr29:37785526-37785297 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 171
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 73, 0

Conread position: 132-345
Cow position: chr29:24420481-24420265 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 159
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 114, 0

Conread position: 132-346
Cow position: chr29:133850-134077 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 168
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 65, 0

Conread position: 132-346
Cow position: chr29:649928-650158 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 167
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 84, 139

Conread position: 132-346
Cow position: chr29:4875244-4875013 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 178
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 15, 0

Conread position: 132-346
Cow position: chr29:15041864-15042078 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 161
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 150, 34

Conread position: 132-346
Cow position: chr29:15940978-15940753 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 170
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 114, 127

Conread position: 132-346
Cow position: chr29:17543110-17543330 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 164
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 112, 0

Conread position: 132-346
Cow position: chr29:24952346-24952568 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 0

Conread position: 132-346
Cow position: chr29:35406125-35405914 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 160
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 114, 46

Conread position: 132-346
Cow position: chr29:36243002-36243224 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 161
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 58, 16

Conread position: 132-346
Cow position: chr29:36530524-36530747 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 171
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 114, 29

Conread position: 132-346
Cow position: chr29:38910344-38910120 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 170
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 114, 0

Conread position: 132-346
Cow position: chr29:40894601-40894814 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 153, 82

Conread position: 132-346
Cow position: chr29:45005956-45005745 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 162
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 113, 0

Conread position: 133-344
Cow position: chr29:28195855-28195636 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 168
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 126, 63

Conread position: 134-342
Cow position: chr29:22949001-22948783 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 80, 0

Conread position: 134-345
Cow position: chr29:1582963-1582744 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 170
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 123, 44

Conread position: 136-346
Cow position: chr29:27007783-27007997 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 110, 83

Conread position: 137-346
Cow position: chr29:29477367-29477153 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 158
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 109, 206

Conread position: 140-346
Cow position: chr29:12901436-12901229 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 144, 64

Conread position: 140-346
Cow position: chr29:16302629-16302426 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 142
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 164, 90

Conread position: 144-346
Cow position: chr29:10838623-10838830 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 153
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 103, 14

Conread position: 148-346
Cow position: chr29:14037037-14036831 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 56, 0

Conread position: 149-344
Cow position: chr29:16657368-16657566 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 157
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 133, 92

Conread position: 156-344
Cow position: chr29:21000322-21000521 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 162-346
Cow position: chr29:3368773-3368585 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 133
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 66, 99

Conread position: 164-346
Cow position: chr29:22720823-22721010 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 82, 31

Conread position: 175-346
Cow position: chr29:37961269-37961098 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 107, 41

Conread position: 176-346
Cow position: chr29:17400-17224 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 70, 17

Conread position: 187-346
Cow position: chr29:45588760-45588593 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 130
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 29, 0

Conread position: 188-343
Cow position: chr29:10296724-10296562 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 189-346
Cow position: chr29:3502776-3502933 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 130
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 30, 67

Conread position: 194-346
Cow position: chr29:14501316-14501474 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 90, 60

Conread position: 194-346
Cow position: chr29:34360072-34359922 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 52, 86

Conread position: 195-346
Cow position: chr29:3395833-3395986 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 204-336
Cow position: chr29:19338711-19338853 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 204-344
Cow position: chr29:31928711-31928859 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 43, 0

Show alignments to all cow chromosomes.