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Cow genome map

           
Conread name:
           
Ovi1-UMC-pd3ov1-003-d11
        

               
Conread position:
               
106-346
               

               
Cow position:
               
chr3:53593088-53592839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
18, 89
               

               
Conread position:
               
116-345
               

               
Cow position:
               
chr3:59648885-59649111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
191, 82
               

               
Conread position:
               
125-346
               

               
Cow position:
               
chr3:48296342-48296567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
133, 124
               

               
Conread position:
               
129-346
               

               
Cow position:
               
chr3:27242880-27242661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
156, 55
               

               
Conread position:
               
129-346
               

               
Cow position:
               
chr3:44535125-44534909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
87, 103
               

               
Conread position:
               
129-346
               

               
Cow position:
               
chr3:53903824-53904044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
117, 67
               

               
Conread position:
               
130-346
               

               
Cow position:
               
chr3:5851291-5851066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
130-346
               

               
Cow position:
               
chr3:65273762-65273539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
127, 58
               

               
Conread position:
               
130-346
               

               
Cow position:
               
chr3:70566102-70565880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
131-325
               

               
Cow position:
               
chr3:3032038-3032232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
153, 63
               

               
Conread position:
               
131-337
               

               
Cow position:
               
chr3:10958588-10958380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
115, 60
               

               
Conread position:
               
131-342
               

               
Cow position:
               
chr3:2334922-2335140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
115, 32
               

               
Conread position:
               
131-343
               

               
Cow position:
               
chr3:14552517-14552733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
115, 10
               

               
Conread position:
               
131-344
               

               
Cow position:
               
chr3:2007911-2008121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
116, 97
               

               
Conread position:
               
131-344
               

               
Cow position:
               
chr3:9676711-9676493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
131-344
               

               
Cow position:
               
chr3:24639227-24639447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
111, 124
               

               
Conread position:
               
131-344
               

               
Cow position:
               
chr3:46350284-46350519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
131-344
               

               
Cow position:
               
chr3:53384646-53384428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
115, 156
               

               
Conread position:
               
131-344
               

               
Cow position:
               
chr3:56582484-56582699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
115, 33
               

               
Conread position:
               
131-344
               

               
Cow position:
               
chr3:77496455-77496677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
118, 57
               

               
Conread position:
               
131-345
               

               
Cow position:
               
chr3:55085553-55085326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
131-346
               

               
Cow position:
               
chr3:997591-997817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
131-346
               

               
Cow position:
               
chr3:1830928-1830711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
73, 143
               

               
Conread position:
               
131-346
               

               
Cow position:
               
chr3:2035935-2036156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
117, 128
               

               
Conread position:
               
131-346
               

               
Cow position:
               
chr3:2506842-2506619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
115, 98
               

               
Conread position:
               
131-346
               

               
Cow position:
               
chr3:2674666-2674885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 207
               

               
Conread position:
               
131-346
               

               
Cow position:
               
chr3:3776671-3776896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
100, 131
               

               
Conread position:
               
131-346
               

               
Cow position:
               
chr3:4457437-4457214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
115, 22
               

               
Conread position:
               
131-346
               

               
Cow position:
               
chr3:5101123-5100909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
128, 155
               

               
Conread position:
               
131-346
               

               
Cow position:
               
chr3:6442872-6443097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
131-346
               

               
Cow position:
               
chr3:6689632-6689856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
115, 24
               

               
Conread position:
               
131-346
               

               
Cow position:
               
chr3:6897999-6898205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
131-346
               

               
Cow position:
               
chr3:7338140-7337912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
106, 48
               

               
Conread position:
               
131-346
               

               
Cow position:
               
chr3:8716884-8717107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
115, 110
               

               
Conread position:
               
131-346
               

               
Cow position:
               
chr3:8901053-8901277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
76, 173
               

               
Conread position:
               
131-346
               

               
Cow position:
               
chr3:9116547-9116761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
126, 65
               

               
Conread position:
               
131-346
               

               
Cow position:
               
chr3:9641185-9641423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
131-346
               

               
Cow position:
               
chr3:10346984-10347213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
131-346
               

               
Cow position:
               
chr3:14456266-14456047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
109, 68
               

               
Conread position:
               
131-346
               

               
Cow position:
               
chr3:14717451-14717668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
153, 110
               

               
Conread position:
               
131-346
               

               
Cow position:
               
chr3:15387842-15388073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
131-346
               

               
Cow position:
               
chr3:16656829-16656619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
105, 32
               

               
Conread position:
               
131-346
               

               
Cow position:
               
chr3:16752610-16752395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
153, 111
               

               
Conread position:
               
131-346
               

               
Cow position:
               
chr3:18066771-18066993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
131-346
               

               
Cow position:
               
chr3:18887216-18887443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
131-346
               

               
Cow position:
               
chr3:19708460-19708247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
152, 62
               

               
Conread position:
               
131-346
               

               
Cow position:
               
chr3:20663901-20663676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
131-346
               

               
Cow position:
               
chr3:20746943-20746725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
46, 157
               

               
Conread position:
               
131-346
               

               
Cow position:
               
chr3:20802991-20802772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
115, 67
               

               
Conread position:
               
131-346
               

               
Cow position:
               
chr3:22872415-22872194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
131-346
               

               
Cow position:
               
chr3:23169433-23169208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
131-346
               

               
Cow position:
               
chr3:25690430-25690647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
115, 56
               

               
Conread position:
               
131-346
               

               
Cow position:
               
chr3:26903754-26903973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
112, 73
               

               
Conread position:
               
131-346
               

               
Cow position:
               
chr3:28357962-28357737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
131-346
               

               
Cow position:
               
chr3:31500992-31501209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
153, 52
               

               
Conread position:
               
131-346
               

               
Cow position:
               
chr3:33698362-33698583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
115, 63
               

               
Conread position:
               
131-346
               

               
Cow position:
               
chr3:34526007-34525783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
109, 129
               

               
Conread position:
               
131-346
               

               
Cow position:
               
chr3:35283448-35283236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
115, 66
               

               
Conread position:
               
131-346
               

               
Cow position:
               
chr3:37599779-37599561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 206
               

               
Conread position:
               
131-346
               

               
Cow position:
               
chr3:40101034-40100813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
131-346
               

               
Cow position:
               
chr3:41367346-41367126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
115, 110
               

               
Conread position:
               
131-346
               

               
Cow position:
               
chr3:42177793-42178014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
38, 115
               

               
Conread position:
               
131-346
               

               
Cow position:
               
chr3:48269500-48269725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
131-346
               

               
Cow position:
               
chr3:48530275-48530495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
115, 88
               

               
Conread position:
               
131-346
               

               
Cow position:
               
chr3:49327584-49327799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
154, 18
               

               
Conread position:
               
131-346
               

               
Cow position:
               
chr3:49650018-49650243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
115, 33
               

               
Conread position:
               
131-346
               

               
Cow position:
               
chr3:50768312-50768540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
55, 114
               

               
Conread position:
               
131-346
               

               
Cow position:
               
chr3:51032982-51033204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
115, 110
               

               
Conread position:
               
131-346
               

               
Cow position:
               
chr3:53221665-53221872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
153, 52
               

               
Conread position:
               
131-346
               

               
Cow position:
               
chr3:55117332-55117110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
115, 74
               

               
Conread position:
               
131-346
               

               
Cow position:
               
chr3:55190108-55189898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
118, 22
               

               
Conread position:
               
131-346
               

               
Cow position:
               
chr3:58383599-58383826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
131-346
               

               
Cow position:
               
chr3:60892268-60892490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
49, 101
               

               
Conread position:
               
131-346
               

               
Cow position:
               
chr3:61191280-61191066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
118, 156
               

               
Conread position:
               
131-346
               

               
Cow position:
               
chr3:61539434-61539658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
115, 62
               

               
Conread position:
               
131-346
               

               
Cow position:
               
chr3:66610201-66609985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 165
               

               
Conread position:
               
131-346
               

               
Cow position:
               
chr3:67929634-67929406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
28, 122
               

               
Conread position:
               
131-346
               

               
Cow position:
               
chr3:68302965-68303190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
131-346
               

               
Cow position:
               
chr3:69849865-69849648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
118, 180
               

               
Conread position:
               
131-346
               

               
Cow position:
               
chr3:72675725-72675950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 26
               

               
Conread position:
               
131-346
               

               
Cow position:
               
chr3:72776877-72777103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
131-346
               

               
Cow position:
               
chr3:73708696-73708906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
153, 60
               

               
Conread position:
               
131-346
               

               
Cow position:
               
chr3:73962042-73961825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
131-346
               

               
Cow position:
               
chr3:75710950-75711169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
74, 116
               

               
Conread position:
               
131-346
               

               
Cow position:
               
chr3:76173025-76172802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
131-346
               

               
Cow position:
               
chr3:79220487-79220708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
112, 10
               

               
Conread position:
               
131-346
               

               
Cow position:
               
chr3:79592251-79592027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
115, 65
               

               
Conread position:
               
131-346
               

               
Cow position:
               
chr3:79884849-79884629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
131-346
               

               
Cow position:
               
chr3:79902140-79902361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
132-344
               

               
Cow position:
               
chr3:40231571-40231789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
114, 44
               

               
Conread position:
               
132-344
               

               
Cow position:
               
chr3:54782373-54782161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
108, 73
               

               
Conread position:
               
132-345
               

               
Cow position:
               
chr3:5420225-5420005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
116, 31
               

               
Conread position:
               
132-345
               

               
Cow position:
               
chr3:38497582-38497804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
72, 117
               

               
Conread position:
               
132-345
               

               
Cow position:
               
chr3:53588754-53588530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
132-346
               

               
Cow position:
               
chr3:9843216-9843445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
78, 115
               

               
Conread position:
               
132-346
               

               
Cow position:
               
chr3:15685272-15685056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
152, 116
               

               
Conread position:
               
132-346
               

               
Cow position:
               
chr3:20471728-20471504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
79, 116
               

               
Conread position:
               
132-346
               

               
Cow position:
               
chr3:24823613-24823836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
114, 47
               

               
Conread position:
               
132-346
               

               
Cow position:
               
chr3:37580686-37580456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
132-346
               

               
Cow position:
               
chr3:38252633-38252850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
152, 130
               

               
Conread position:
               
132-346
               

               
Cow position:
               
chr3:41818450-41818234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
108, 82
               

               
Conread position:
               
132-346
               

               
Cow position:
               
chr3:41947476-41947260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
117, 39
               

               
Conread position:
               
132-346
               

               
Cow position:
               
chr3:43528599-43528379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
132-346
               

               
Cow position:
               
chr3:48211147-48211350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
132-346
               

               
Cow position:
               
chr3:48370769-48370993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
114, 127
               

               
Conread position:
               
132-346
               

               
Cow position:
               
chr3:52148038-52147818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
114, 95
               

               
Conread position:
               
132-346
               

               
Cow position:
               
chr3:53538156-53538386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
77, 32
               

               
Conread position:
               
132-346
               

               
Cow position:
               
chr3:54340774-54340552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
125, 28
               

               
Conread position:
               
132-346
               

               
Cow position:
               
chr3:55107470-55107247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
111, 70
               

               
Conread position:
               
132-346
               

               
Cow position:
               
chr3:58286259-58286040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
12, 58
               

               
Conread position:
               
132-346
               

               
Cow position:
               
chr3:62824845-62824625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
132-346
               

               
Cow position:
               
chr3:64294315-64294539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
50, 71
               

               
Conread position:
               
132-346
               

               
Cow position:
               
chr3:66738411-66738635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
109, 126
               

               
Conread position:
               
132-346
               

               
Cow position:
               
chr3:67044455-67044239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
123, 72
               

               
Conread position:
               
132-346
               

               
Cow position:
               
chr3:68291206-68291427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
114, 34
               

               
Conread position:
               
132-346
               

               
Cow position:
               
chr3:68342617-68342396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
41, 150
               

               
Conread position:
               
132-346
               

               
Cow position:
               
chr3:74849400-74849181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
114, 109
               

               
Conread position:
               
132-346
               

               
Cow position:
               
chr3:75143394-75143174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
132-346
               

               
Cow position:
               
chr3:79690892-79691105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
152, 95
               

               
Conread position:
               
133-336
               

               
Cow position:
               
chr3:26920538-26920744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
72, 34
               

               
Conread position:
               
133-346
               

               
Cow position:
               
chr3:13899814-13899591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
133-346
               

               
Cow position:
               
chr3:14626511-14626300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
125, 109
               

               
Conread position:
               
133-346
               

               
Cow position:
               
chr3:29887785-29887564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
133-346
               

               
Cow position:
               
chr3:36672365-36672141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
103, 30
               

               
Conread position:
               
133-346
               

               
Cow position:
               
chr3:49119393-49119169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
133-346
               

               
Cow position:
               
chr3:50329436-50329217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
16, 11
               

               
Conread position:
               
134-344
               

               
Cow position:
               
chr3:12255120-12255334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
134-344
               

               
Cow position:
               
chr3:51491104-51491322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
134-344
               

               
Cow position:
               
chr3:53223008-53222786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
134-344
               

               
Cow position:
               
chr3:70840504-70840289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
107, 9
               

               
Conread position:
               
134-345
               

               
Cow position:
               
chr3:34953294-34953515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
134-346
               

               
Cow position:
               
chr3:69751061-69750843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
15, 10
               

               
Conread position:
               
134-346
               

               
Cow position:
               
chr3:72018763-72018973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
112, 93
               

               
Conread position:
               
135-344
               

               
Cow position:
               
chr3:18393742-18393532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
79, 10
               

               
Conread position:
               
135-346
               

               
Cow position:
               
chr3:4331999-4332225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
135-346
               

               
Cow position:
               
chr3:70130179-70129950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
136-346
               

               
Cow position:
               
chr3:12671051-12670836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
111, 154
               

               
Conread position:
               
136-346
               

               
Cow position:
               
chr3:31225093-31225311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
74, 25
               

               
Conread position:
               
136-346
               

               
Cow position:
               
chr3:34096307-34096098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
111, 67
               

               
Conread position:
               
137-345
               

               
Cow position:
               
chr3:62826970-62826762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
112, 44
               

               
Conread position:
               
137-346
               

               
Cow position:
               
chr3:32363930-32363710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
109, 124
               

               
Conread position:
               
137-346
               

               
Cow position:
               
chr3:36657127-36656912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
137-346
               

               
Cow position:
               
chr3:81371299-81371505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
109, 150
               

               
Conread position:
               
139-346
               

               
Cow position:
               
chr3:13117992-13118207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
75, 90
               

               
Conread position:
               
139-346
               

               
Cow position:
               
chr3:27553198-27553412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
102, 12
               

               
Conread position:
               
139-346
               

               
Cow position:
               
chr3:75164249-75164053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
110, 64
               

               
Conread position:
               
140-344
               

               
Cow position:
               
chr3:66708425-66708216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
81, 5
               

               
Conread position:
               
142-338
               

               
Cow position:
               
chr3:41053464-41053663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
142, 22
               

               
Conread position:
               
142-346
               

               
Cow position:
               
chr3:12323716-12323922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
104, 84
               

               
Conread position:
               
142-346
               

               
Cow position:
               
chr3:17222502-17222286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
67, 7
               

               
Conread position:
               
146-343
               

               
Cow position:
               
chr3:31903456-31903259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
113, 96
               

               
Conread position:
               
146-346
               

               
Cow position:
               
chr3:70895699-70895908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
100, 21
               

               
Conread position:
               
146-346
               

               
Cow position:
               
chr3:83988136-83988338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
100, 48
               

               
Conread position:
               
149-346
               

               
Cow position:
               
chr3:29311194-29310990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
149-346
               

               
Cow position:
               
chr3:58206794-58206590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
87, 17
               

               
Conread position:
               
151-346
               

               
Cow position:
               
chr3:80071774-80071984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
152-344
               

               
Cow position:
               
chr3:22954191-22953996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
96, 62
               

               
Conread position:
               
152-345
               

               
Cow position:
               
chr3:33214749-33214952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
152-345
               

               
Cow position:
               
chr3:66846501-66846309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
90, 108
               

               
Conread position:
               
152-346
               

               
Cow position:
               
chr3:58060959-58060755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
95, 106
               

               
Conread position:
               
152-346
               

               
Cow position:
               
chr3:79292493-79292687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
94, 53
               

               
Conread position:
               
153-346
               

               
Cow position:
               
chr3:48852302-48852106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
93, 29
               

               
Conread position:
               
154-346
               

               
Cow position:
               
chr3:61857156-61857358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
155-343
               

               
Cow position:
               
chr3:81471436-81471246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
91, 41
               

               
Conread position:
               
155-346
               

               
Cow position:
               
chr3:59451256-59451446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
103, 130
               

               
Conread position:
               
156-324
               

               
Cow position:
               
chr3:76614305-76614474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
93, 37
               

               
Conread position:
               
158-346
               

               
Cow position:
               
chr3:48900838-48900644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
88, 112
               

               
Conread position:
               
158-346
               

               
Cow position:
               
chr3:57479665-57479468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
88, 47
               

               
Conread position:
               
159-342
               

               
Cow position:
               
chr3:65058367-65058556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
87, 82
               

               
Conread position:
               
160-344
               

               
Cow position:
               
chr3:78076858-78077049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
89, 36
               

               
Conread position:
               
163-346
               

               
Cow position:
               
chr3:34571067-34571259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
83, 35
               

               
Conread position:
               
165-346
               

               
Cow position:
               
chr3:31309691-31309497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
167-346
               

               
Cow position:
               
chr3:83920874-83921060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
79, 29
               

               
Conread position:
               
168-343
               

               
Cow position:
               
chr3:13350591-13350771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
74, 28
               

               
Conread position:
               
169-346
               

               
Cow position:
               
chr3:46900869-46901054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
19, 73
               

               
Conread position:
               
172-346
               

               
Cow position:
               
chr3:28898550-28898365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
39, 75
               

               
Conread position:
               
174-346
               

               
Cow position:
               
chr3:57754800-57754622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
72, 53
               

               
Conread position:
               
175-346
               

               
Cow position:
               
chr3:78200948-78201129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
177-344
               

               
Cow position:
               
chr3:53112851-53113029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
182-346
               

               
Cow position:
               
chr3:46161157-46160987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
182-346
               

               
Cow position:
               
chr3:53790856-53790679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
186-346
               

               
Cow position:
               
chr3:23417173-23417010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
31, 72
               

               
Conread position:
               
188-346
               

               
Cow position:
               
chr3:27274233-27274389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
14, 61
               

               
Conread position:
               
188-346
               

               
Cow position:
               
chr3:65800289-65800453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
66, 57
               

               
Conread position:
               
189-344
               

               
Cow position:
               
chr3:18763589-18763749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
60, 116
               

               
Conread position:
               
189-346
               

               
Cow position:
               
chr3:2216055-2216221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
57, 52
               

               
Conread position:
               
189-346
               

               
Cow position:
               
chr3:70401598-70401760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
57, 52
               

               
Conread position:
               
191-346
               

               
Cow position:
               
chr3:19198378-19198539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
191-346
               

               
Cow position:
               
chr3:53909811-53909971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
194-346
               

               
Cow position:
               
chr3:7678373-7678525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
65, 47
               

               
Conread position:
               
194-346
               

               
Cow position:
               
chr3:30463466-30463308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
196-346
               

               
Cow position:
               
chr3:11019820-11019978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
200-345
               

               
Cow position:
               
chr3:72121-72271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
200-346
               

               
Cow position:
               
chr3:59208518-59208672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
200-346
               

               
Cow position:
               
chr3:79148570-79148414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
204-344
               

               
Cow position:
               
chr3:73443377-73443231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
204-346
               

               
Cow position:
               
chr3:4031678-4031828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
204-346
               

               
Cow position:
               
chr3:14602003-14601855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
42, 37
               

               
Conread position:
               
204-346
               

               
Cow position:
               
chr3:18854803-18854950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
42, 96
               

               
Conread position:
               
204-346
               

               
Cow position:
               
chr3:51609526-51609678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
204-346
               

               
Cow position:
               
chr3:56059517-56059664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
45, 99
               

               
Conread position:
               
204-346
               

               
Cow position:
               
chr3:66885330-66885176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
205-346
               

               
Cow position:
               
chr3:55124567-55124420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
206-346
               

               
Cow position:
               
chr3:59392395-59392248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
79, 39
               

               
Conread position:
               
208-346
               

               
Cow position:
               
chr3:52418679-52418812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
38, 79
               

               
Conread position:
               
210-344
               

               
Cow position:
               
chr3:73764477-73764340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
75, 46
               

               
Conread position:
               
212-345
               

               
Cow position:
               
chr3:23471750-23471607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
215-346
               

               
Cow position:
               
chr3:42483621-42483758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
42, 0
               
Show alignments to all cow chromosomes.