Cow genome map
| Conread name: | Ovi1-UMC-pd3ov1-003-d11 |
| Conread position: | 115-346 |
| Cow position: | chr5:15362738-15362978 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 115-346 |
| Cow position: | chr5:50722716-50722955 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 123-346 |
| Cow position: | chr5:48828825-48829065 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 179 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 120, 161 |
| Conread position: | 123-346 |
| Cow position: | chr5:62678336-62678568 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 124, 139 |
| Conread position: | 126-346 |
| Cow position: | chr5:64321431-64321660 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 120, 54 |
| Conread position: | 126-346 |
| Cow position: | chr5:65941571-65941343 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 120, 41 |
| Conread position: | 128-346 |
| Cow position: | chr5:49820825-49821051 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 177 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 129-346 |
| Cow position: | chr5:20407974-20407760 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 107, 29 |
| Conread position: | 129-346 |
| Cow position: | chr5:34463905-34463678 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 129-346 |
| Cow position: | chr5:55756757-55756524 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 124, 61 |
| Conread position: | 130-339 |
| Cow position: | chr5:60015606-60015823 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 154, 0 |
| Conread position: | 130-346 |
| Cow position: | chr5:34709477-34709703 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 131-318 |
| Cow position: | chr5:24919191-24919002 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 131-338 |
| Cow position: | chr5:17384416-17384193 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 50, 36 |
| Conread position: | 131-342 |
| Cow position: | chr5:61725657-61725876 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 128, 37 |
| Conread position: | 131-344 |
| Cow position: | chr5:3204524-3204738 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 118, 60 |
| Conread position: | 131-344 |
| Cow position: | chr5:29827739-29827954 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 118, 181 |
| Conread position: | 131-344 |
| Cow position: | chr5:34638579-34638789 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 115, 45 |
| Conread position: | 131-344 |
| Cow position: | chr5:44994359-44994133 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 131-344 |
| Cow position: | chr5:47601497-47601724 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 131-344 |
| Cow position: | chr5:51761484-51761261 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 111, 143 |
| Conread position: | 131-344 |
| Cow position: | chr5:53825212-53825418 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 131-344 |
| Cow position: | chr5:67212067-67212287 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 176 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 118, 71 |
| Conread position: | 131-345 |
| Cow position: | chr5:6130042-6130258 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 115, 101 |
| Conread position: | 131-345 |
| Cow position: | chr5:7193118-7193337 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 131-345 |
| Cow position: | chr5:31635134-31635341 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 85, 158 |
| Conread position: | 131-345 |
| Cow position: | chr5:61839874-61840092 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 167 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 151, 0 |
| Conread position: | 131-345 |
| Cow position: | chr5:64844431-64844216 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 110 |
| Conread position: | 131-346 |
| Cow position: | chr5:2500507-2500281 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 65, 123 |
| Conread position: | 131-346 |
| Cow position: | chr5:5111391-5111168 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 115, 212 |
| Conread position: | 131-346 |
| Cow position: | chr5:5938010-5938231 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 131-346 |
| Cow position: | chr5:6528366-6528589 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 131-346 |
| Cow position: | chr5:10261556-10261328 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 73, 105 |
| Conread position: | 131-346 |
| Cow position: | chr5:14314209-14314432 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 177 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 115, 30 |
| Conread position: | 131-346 |
| Cow position: | chr5:14550901-14550675 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 131-346 |
| Cow position: | chr5:15363579-15363801 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 115, 71 |
| Conread position: | 131-346 |
| Cow position: | chr5:15462411-15462616 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 115, 65 |
| Conread position: | 131-346 |
| Cow position: | chr5:19300094-19299869 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 115, 127 |
| Conread position: | 131-346 |
| Cow position: | chr5:19969346-19969121 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 131-346 |
| Cow position: | chr5:21524851-21525075 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 115, 17 |
| Conread position: | 131-346 |
| Cow position: | chr5:21828542-21828773 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 131-346 |
| Cow position: | chr5:24348807-24349014 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 115, 21 |
| Conread position: | 131-346 |
| Cow position: | chr5:26133388-26133167 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 171 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 131-346 |
| Cow position: | chr5:26377978-26377760 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 65 |
| Conread position: | 131-346 |
| Cow position: | chr5:26790758-26790549 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 160 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 173, 65 |
| Conread position: | 131-346 |
| Cow position: | chr5:27015379-27015591 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 131-346 |
| Cow position: | chr5:29771204-29771425 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 128, 100 |
| Conread position: | 131-346 |
| Cow position: | chr5:31145096-31144880 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 168 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 74, 100 |
| Conread position: | 131-346 |
| Cow position: | chr5:32141011-32140801 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 115, 57 |
| Conread position: | 131-346 |
| Cow position: | chr5:34528250-34528469 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 65 |
| Conread position: | 131-346 |
| Cow position: | chr5:39299214-39299438 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 131-346 |
| Cow position: | chr5:39936789-39937009 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 131-346 |
| Cow position: | chr5:41546204-41545982 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 118, 96 |
| Conread position: | 131-346 |
| Cow position: | chr5:41609000-41609206 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 151, 58 |
| Conread position: | 131-346 |
| Cow position: | chr5:41951395-41951178 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 169 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 128, 66 |
| Conread position: | 131-346 |
| Cow position: | chr5:45705733-45705954 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 170 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 131-346 |
| Cow position: | chr5:47313159-47313380 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 169 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 131-346 |
| Cow position: | chr5:47343585-47343810 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 131-346 |
| Cow position: | chr5:47871365-47871140 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 27, 84 |
| Conread position: | 131-346 |
| Cow position: | chr5:47889029-47888804 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 176 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 131-346 |
| Cow position: | chr5:50821474-50821689 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 166 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 115, 155 |
| Conread position: | 131-346 |
| Cow position: | chr5:51151677-51151452 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 96, 111 |
| Conread position: | 131-346 |
| Cow position: | chr5:51309653-51309878 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 131-346 |
| Cow position: | chr5:51357816-51357593 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 115, 83 |
| Conread position: | 131-346 |
| Cow position: | chr5:52165493-52165272 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 115, 65 |
| Conread position: | 131-346 |
| Cow position: | chr5:52269502-52269278 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 20, 185 |
| Conread position: | 131-346 |
| Cow position: | chr5:53841970-53842191 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 61, 46 |
| Conread position: | 131-346 |
| Cow position: | chr5:55068407-55068617 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 110, 87 |
| Conread position: | 131-346 |
| Cow position: | chr5:55176578-55176797 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 115, 73 |
| Conread position: | 131-346 |
| Cow position: | chr5:56523860-56524082 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 110 |
| Conread position: | 131-346 |
| Cow position: | chr5:57935427-57935202 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 115, 75 |
| Conread position: | 131-346 |
| Cow position: | chr5:58004931-58005154 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 128, 26 |
| Conread position: | 131-346 |
| Cow position: | chr5:63967955-63967740 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 173 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 116, 36 |
| Conread position: | 131-346 |
| Cow position: | chr5:65933243-65933023 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 174 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 37, 118 |
| Conread position: | 131-346 |
| Cow position: | chr5:69099212-69099439 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 131-346 |
| Cow position: | chr5:72045960-72045739 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 31, 164 |
| Conread position: | 132-342 |
| Cow position: | chr5:26096984-26097198 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 0 |
| Conread position: | 132-344 |
| Cow position: | chr5:51293044-51292824 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 84, 132 |
| Conread position: | 132-344 |
| Cow position: | chr5:51315161-51314937 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 84, 97 |
| Conread position: | 132-344 |
| Cow position: | chr5:61030542-61030320 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 132-345 |
| Cow position: | chr5:15478795-15479019 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 174 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 132-345 |
| Cow position: | chr5:27690376-27690151 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 73, 131 |
| Conread position: | 132-345 |
| Cow position: | chr5:31437323-31437105 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 132-346 |
| Cow position: | chr5:4166357-4166569 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 114, 156 |
| Conread position: | 132-346 |
| Cow position: | chr5:15882788-15882565 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 101, 71 |
| Conread position: | 132-346 |
| Cow position: | chr5:27007583-27007806 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 70, 128 |
| Conread position: | 132-346 |
| Cow position: | chr5:32342711-32342490 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 78, 122 |
| Conread position: | 132-346 |
| Cow position: | chr5:39675756-39675540 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 152, 69 |
| Conread position: | 132-346 |
| Cow position: | chr5:41229398-41229618 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 36, 174 |
| Conread position: | 132-346 |
| Cow position: | chr5:41604297-41604522 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 120, 73 |
| Conread position: | 132-346 |
| Cow position: | chr5:42096315-42096538 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 113, 34 |
| Conread position: | 132-346 |
| Cow position: | chr5:45940926-45940705 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 75, 156 |
| Conread position: | 132-346 |
| Cow position: | chr5:54311010-54311239 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 80, 145 |
| Conread position: | 132-346 |
| Cow position: | chr5:62436835-62437059 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 132-346 |
| Cow position: | chr5:66119569-66119342 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 133-346 |
| Cow position: | chr5:16184780-16184994 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 172 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 113, 63 |
| Conread position: | 133-346 |
| Cow position: | chr5:18573858-18574077 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 133-346 |
| Cow position: | chr5:30276383-30276604 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 147, 118 |
| Conread position: | 134-340 |
| Cow position: | chr5:68082271-68082066 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 112, 61 |
| Conread position: | 134-346 |
| Cow position: | chr5:28224144-28224359 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 168 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 149, 136 |
| Conread position: | 134-346 |
| Cow position: | chr5:39094242-39094459 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 170 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 112, 160 |
| Conread position: | 134-346 |
| Cow position: | chr5:45226140-45225918 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 178 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 134-346 |
| Cow position: | chr5:46294978-46294757 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 135-344 |
| Cow position: | chr5:53855392-53855599 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 30, 153 |
| Conread position: | 135-345 |
| Cow position: | chr5:46708870-46709090 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 135-346 |
| Cow position: | chr5:1105170-1104960 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 111, 68 |
| Conread position: | 135-346 |
| Cow position: | chr5:13691885-13691664 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 111, 32 |
| Conread position: | 135-346 |
| Cow position: | chr5:43858738-43858525 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 168 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 135-346 |
| Cow position: | chr5:58519709-58519498 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 164 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 111, 144 |
| Conread position: | 136-346 |
| Cow position: | chr5:65752550-65752763 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 168 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 110, 85 |
| Conread position: | 137-345 |
| Cow position: | chr5:26467314-26467529 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 109, 68 |
| Conread position: | 137-346 |
| Cow position: | chr5:62107804-62107584 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 137-346 |
| Cow position: | chr5:64392846-64393065 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 138-346 |
| Cow position: | chr5:4551825-4552042 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 141-346 |
| Cow position: | chr5:31640125-31640338 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 106, 46 |
| Conread position: | 145-345 |
| Cow position: | chr5:72149951-72150153 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 93, 60 |
| Conread position: | 145-346 |
| Cow position: | chr5:63964481-63964262 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 146-340 |
| Cow position: | chr5:4710440-4710244 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 113, 59 |
| Conread position: | 147-346 |
| Cow position: | chr5:33661556-33661765 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 150-346 |
| Cow position: | chr5:59443546-59443341 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 162 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 152-346 |
| Cow position: | chr5:33180613-33180815 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 153-346 |
| Cow position: | chr5:23666550-23666351 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 63, 22 |
| Conread position: | 154-346 |
| Cow position: | chr5:33081081-33080882 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 155-346 |
| Cow position: | chr5:31469873-31469678 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 156 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 91, 102 |
| Conread position: | 156-345 |
| Cow position: | chr5:43474565-43474753 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 89, 27 |
| Conread position: | 158-346 |
| Cow position: | chr5:9090307-9090113 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 88, 36 |
| Conread position: | 159-346 |
| Cow position: | chr5:50533667-50533480 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 80, 37 |
| Conread position: | 159-346 |
| Cow position: | chr5:50950267-50950461 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 163-346 |
| Cow position: | chr5:63987729-63987544 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 86, 78 |
| Conread position: | 164-346 |
| Cow position: | chr5:52905769-52905587 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 78, 32 |
| Conread position: | 167-346 |
| Cow position: | chr5:59298237-59298051 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 168-346 |
| Cow position: | chr5:40889560-40889377 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 78, 38 |
| Conread position: | 171-342 |
| Cow position: | chr5:37091049-37090868 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 78, 88 |
| Conread position: | 172-346 |
| Cow position: | chr5:57494688-57494503 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 74, 87 |
| Conread position: | 175-344 |
| Cow position: | chr5:18276209-18276383 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 71, 13 |
| Conread position: | 178-346 |
| Cow position: | chr5:63992431-63992256 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 182-346 |
| Cow position: | chr5:48519369-48519539 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 59, 79 |
| Conread position: | 187-346 |
| Cow position: | chr5:65924959-65924789 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 17, 74 |
| Conread position: | 194-346 |
| Cow position: | chr5:65601209-65601367 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 195-342 |
| Cow position: | chr5:28302990-28302837 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 195-346 |
| Cow position: | chr5:61600162-61600323 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 197-346 |
| Cow position: | chr5:63388547-63388705 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 52, 8 |
| Conread position: | 203-344 |
| Cow position: | chr5:12709645-12709790 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 43, 11 |
| Conread position: | 203-346 |
| Cow position: | chr5:30253501-30253648 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 13, 40 |
| Conread position: | 204-346 |
| Cow position: | chr5:1247034-1247183 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 204-346 |
| Cow position: | chr5:51999978-52000129 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 33, 56 |
| Conread position: | 204-346 |
| Cow position: | chr5:53835474-53835621 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 42, 21 |
| Conread position: | 204-346 |
| Cow position: | chr5:58144847-58144697 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 205-344 |
| Cow position: | chr5:32087961-32087812 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 205-346 |
| Cow position: | chr5:30844872-30845020 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 47, 20 |
| Conread position: | 206-345 |
| Cow position: | chr5:6032999-6033146 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 207-346 |
| Cow position: | chr5:40109263-40109406 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 207-346 |
| Cow position: | chr5:61455516-61455665 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 212-346 |
| Cow position: | chr5:24996457-24996316 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 34, 48 |
| Conread position: | 218-346 |
| Cow position: | chr5:56820487-56820355 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 28, 55 |
Show alignments to all cow chromosomes.