Cow genome map

Conread name: Ovi1-UMC-pd3ov2-001-c12

Conread position: 1-108
Cow position: chr13:21209990-21209883 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 41, 66

Conread position: 1-112
Cow position: chr13:46458754-46458641 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 1-121
Cow position: chr13:17815900-17815779 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 41, 117

Conread position: 1-127
Cow position: chr13:62617955-62617830 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 1-131
Cow position: chr13:15172279-15172412 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 1-131
Cow position: chr13:55295491-55295623 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 41, 0

Conread position: 1-134
Cow position: chr13:25261680-25261813 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 39, 10

Conread position: 1-155
Cow position: chr13:28652931-28652779 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 124
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 38, 60

Conread position: 1-155
Cow position: chr13:52199218-52199064 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 39, 117

Conread position: 1-156
Cow position: chr13:20863884-20864039 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 1-162
Cow position: chr13:13265939-13265777 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 119
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 41, 80

Conread position: 1-173
Cow position: chr13:10098859-10099028 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 32, 97

Conread position: 1-181
Cow position: chr13:20880794-20880978 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 129
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 1-188
Cow position: chr13:20440457-20440636 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 1-189
Cow position: chr13:37521248-37521432 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 40, 115

Conread position: 1-205
Cow position: chr13:890040-890241 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 142
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 41, 76

Conread position: 1-205
Cow position: chr13:12618982-12619187 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 41, 112

Conread position: 1-247
Cow position: chr13:15528900-15529152 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 186
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 38, 0

Conread position: 1-252
Cow position: chr13:15903148-15902904 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 174
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 38, 61

Conread position: 1-254
Cow position: chr13:57494051-57494311 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 179
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 21, 99

Conread position: 1-255
Cow position: chr13:12202497-12202239 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 188
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 39, 9

Conread position: 1-258
Cow position: chr13:17966077-17966335 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 193
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 41, 116

Conread position: 1-259
Cow position: chr13:44323032-44322774 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 186
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 40, 76

Conread position: 1-260
Cow position: chr13:13501491-13501745 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 176
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 38, 106

Conread position: 1-260
Cow position: chr13:17021597-17021853 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 191
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 41, 112

Conread position: 1-260
Cow position: chr13:21176190-21176447 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 188
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 40, 117

Conread position: 1-260
Cow position: chr13:31814003-31813748 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 185
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 37, 76

Conread position: 1-260
Cow position: chr13:48037753-48037495 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 176
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 39, 112

Conread position: 1-262
Cow position: chr13:20649847-20650112 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 181
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 36, 242

Conread position: 1-268
Cow position: chr13:17745371-17745111 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 192
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 41, 65

Conread position: 1-268
Cow position: chr13:20820704-20820974 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 193
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 41, 94

Conread position: 1-270
Cow position: chr13:11460753-11460495 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 192
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 38, 54

Conread position: 1-270
Cow position: chr13:17821136-17821405 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 258

Conread position: 1-270
Cow position: chr13:21241961-21242223 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 200
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 39, 60

Conread position: 1-270
Cow position: chr13:53566727-53566464 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 191
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 38, 140

Conread position: 1-270
Cow position: chr13:56686564-56686296 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 198
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 40, 60

Conread position: 1-271
Cow position: chr13:152086-151823 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 193
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 41, 76

Conread position: 1-271
Cow position: chr13:17568967-17569240 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 193
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 27, 172

Conread position: 1-271
Cow position: chr13:19882906-19883174 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 197
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 38, 10

Conread position: 1-271
Cow position: chr13:23667387-23667113 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 189
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 38, 141

Conread position: 1-271
Cow position: chr13:27525133-27525400 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 199
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 38, 112

Conread position: 1-271
Cow position: chr13:47007598-47007855 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 185
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 38, 60

Conread position: 1-271
Cow position: chr13:54702319-54702039 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 199
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 38, 117

Conread position: 1-272
Cow position: chr13:18835324-18835061 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 197
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 41, 114

Conread position: 1-272
Cow position: chr13:21235555-21235810 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 201
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 41, 51

Conread position: 1-272
Cow position: chr13:37818617-37818892 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 191
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 30, 208

Conread position: 1-274
Cow position: chr13:15288797-15289064 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 199
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 13, 30

Conread position: 1-275
Cow position: chr13:12989976-12989707 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 190
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 38, 100

Conread position: 1-275
Cow position: chr13:38329758-38329470 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 202
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 41, 0

Conread position: 1-276
Cow position: chr13:24369712-24369437 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 66

Conread position: 1-276
Cow position: chr13:37484142-37484424 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 202
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 38, 86

Conread position: 1-277
Cow position: chr13:8374640-8374915 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 201
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 41, 117

Conread position: 1-278
Cow position: chr13:13089151-13088885 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 198
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 218, 38

Conread position: 1-278
Cow position: chr13:54583009-54582727 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 200
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 40, 204

Conread position: 1-279
Cow position: chr13:54388889-54389169 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 195
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 41, 20

Conread position: 1-280
Cow position: chr13:547617-547346 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 196
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 31, 78

Conread position: 1-280
Cow position: chr13:13320916-13320650 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 191
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 218, 43

Conread position: 1-280
Cow position: chr13:17800204-17799926 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 210
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 41, 54

Conread position: 1-280
Cow position: chr13:17970896-17971178 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 193
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 41, 86

Conread position: 1-280
Cow position: chr13:18696974-18696692 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 205
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 33, 123

Conread position: 1-280
Cow position: chr13:19022407-19022123 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 199
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 39, 0

Conread position: 1-280
Cow position: chr13:23960681-23960951 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 198
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 39, 111

Conread position: 1-280
Cow position: chr13:45023080-45023358 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 208
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 41, 94

Conread position: 1-281
Cow position: chr13:12670316-12670601 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 199
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 38, 54

Conread position: 1-281
Cow position: chr13:20666257-20666534 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 206
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 38, 16

Conread position: 1-281
Cow position: chr13:34263237-34263521 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 206
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 41, 102

Conread position: 1-282
Cow position: chr13:48165293-48165577 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 200
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 39, 64

Conread position: 1-283
Cow position: chr13:17114247-17114529 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 208
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 37, 21

Conread position: 1-303
Cow position: chr13:40943376-40943071 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 107

Conread position: 1-304
Cow position: chr13:18172470-18172162 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 1-305
Cow position: chr13:17439638-17439939 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 122

Conread position: 1-306
Cow position: chr13:51115896-51116196 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 209
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 43, 70

Conread position: 1-307
Cow position: chr13:10928862-10929164 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 214
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 38, 14

Conread position: 1-307
Cow position: chr13:46181921-46181614 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 202
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 30, 16

Conread position: 1-324
Cow position: chr13:5082782-5082459 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 190

Conread position: 2-111
Cow position: chr13:54344903-54344790 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 2-113
Cow position: chr13:30651306-30651195 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 87
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 2-124
Cow position: chr13:25531657-25531781 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 2-127
Cow position: chr13:6975662-6975789 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 38, 80

Conread position: 2-131
Cow position: chr13:48375514-48375643 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 37, 96

Conread position: 2-157
Cow position: chr13:15869252-15869099 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 34, 114

Conread position: 2-170
Cow position: chr13:12682414-12682583 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 38, 85

Conread position: 2-234
Cow position: chr13:8524490-8524720 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 159
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 38, 45

Conread position: 2-246
Cow position: chr13:6153651-6153898 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 166
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 33, 122

Conread position: 2-251
Cow position: chr13:22085613-22085865 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 183
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 39, 106

Conread position: 2-253
Cow position: chr13:62518201-62518451 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 171
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 40, 32

Conread position: 2-260
Cow position: chr13:6616621-6616887 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 177
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 35, 159

Conread position: 2-260
Cow position: chr13:23479157-23478902 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 186
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 38, 15

Conread position: 2-260
Cow position: chr13:43762300-43762041 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 175
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 38, 75

Conread position: 2-269
Cow position: chr13:35526080-35526333 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 187
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 40, 17

Conread position: 2-269
Cow position: chr13:53574101-53573831 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 185
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 39, 139

Conread position: 2-271
Cow position: chr13:19188432-19188161 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 177
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 116

Conread position: 2-271
Cow position: chr13:20784719-20784452 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 196
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 40, 65

Conread position: 2-271
Cow position: chr13:24586172-24585908 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 196
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 40, 61

Conread position: 2-271
Cow position: chr13:26698366-26698637 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 191
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 36, 142

Conread position: 2-272
Cow position: chr13:1042830-1043103 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 189
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 22, 234

Conread position: 2-272
Cow position: chr13:20473560-20473822 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 197
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 217, 38

Conread position: 2-275
Cow position: chr13:43480188-43479914 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 195
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 37, 111

Conread position: 2-279
Cow position: chr13:21275986-21275713 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 184
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 29, 60

Conread position: 2-279
Cow position: chr13:32283255-32282982 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 184
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 37, 70

Conread position: 2-280
Cow position: chr13:15281806-15282083 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 183
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 28, 119

Conread position: 2-280
Cow position: chr13:37592807-37593096 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 189
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 34, 168

Conread position: 2-281
Cow position: chr13:15110451-15110166 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 192
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 35, 160

Conread position: 2-285
Cow position: chr13:11381591-11381877 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 209
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 37, 75

Conread position: 2-285
Cow position: chr13:43184742-43185034 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 198
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 38, 17

Conread position: 2-306
Cow position: chr13:20683990-20684295 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 225
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 40, 130

Conread position: 2-309
Cow position: chr13:14771588-14771279 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 199
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 35, 235

Conread position: 2-311
Cow position: chr13:13176781-13176469 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 206
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 38, 10

Conread position: 2-317
Cow position: chr13:49503401-49503717 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 227
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 40, 13

Conread position: 3-113
Cow position: chr13:6389510-6389397 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 3-225
Cow position: chr13:11954980-11955210 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 155
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 32, 137

Conread position: 3-256
Cow position: chr13:17622411-17622165 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 169
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 39, 84

Conread position: 3-263
Cow position: chr13:20839693-20839435 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 171
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 37, 110

Conread position: 3-267
Cow position: chr13:9593638-9593370 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 189
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 39, 232

Conread position: 3-271
Cow position: chr13:11260399-11260135 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 185
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 66

Conread position: 3-279
Cow position: chr13:18166863-18166584 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 188
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 37, 120

Conread position: 3-280
Cow position: chr13:51528317-51528585 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 196
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 37, 53

Conread position: 3-281
Cow position: chr13:6974293-6974014 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 192
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 34, 118

Conread position: 3-281
Cow position: chr13:14063393-14063669 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 204
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 39, 6

Conread position: 3-300
Cow position: chr13:20706076-20706378 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 214
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 39, 110

Conread position: 3-303
Cow position: chr13:51940866-51940565 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 206
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 37, 111

Conread position: 3-307
Cow position: chr13:20679480-20679164 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 234
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 11, 116

Conread position: 4-142
Cow position: chr13:19426567-19426707 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 4-233
Cow position: chr13:18243992-18243761 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 157
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 27, 116

Conread position: 4-251
Cow position: chr13:6060881-6061127 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 168
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 38, 83

Conread position: 4-260
Cow position: chr13:6086775-6087020 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 189
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 156, 107

Conread position: 4-260
Cow position: chr13:55674080-55674336 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 182
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 37, 99

Conread position: 4-271
Cow position: chr13:41806904-41806632 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 194
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 38, 0

Conread position: 4-272
Cow position: chr13:15166948-15166678 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 186
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 38, 119

Conread position: 4-279
Cow position: chr13:21107267-21106995 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 193
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 38, 73

Conread position: 4-279
Cow position: chr13:25579058-25579334 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 185
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 33, 63

Conread position: 4-280
Cow position: chr13:17158746-17159027 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 184
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 34, 123

Conread position: 4-281
Cow position: chr13:19393418-19393144 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 197
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 34, 71

Conread position: 4-290
Cow position: chr13:2774256-2773971 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 203
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 35, 114

Conread position: 4-299
Cow position: chr13:56155030-56155318 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 211
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 35, 63

Conread position: 4-320
Cow position: chr13:34281805-34281488 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 225
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 38, 104

Conread position: 4-327
Cow position: chr13:36771290-36771620 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 230
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 32, 157

Conread position: 5-221
Cow position: chr13:25062536-25062325 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 156
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 37, 81

Conread position: 5-260
Cow position: chr13:11820720-11820471 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 182
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 15

Conread position: 5-266
Cow position: chr13:15144244-15144499 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 195
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 15, 61

Conread position: 5-273
Cow position: chr13:18852208-18851939 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 199
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 37, 181

Conread position: 5-278
Cow position: chr13:61976837-61977095 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 193
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 37, 111

Conread position: 5-279
Cow position: chr13:20217260-20217544 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 199
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 35, 270

Conread position: 7-270
Cow position: chr13:60375362-60375627 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 188
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 35, 175

Conread position: 8-271
Cow position: chr13:25817647-25817387 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 51

Conread position: 8-272
Cow position: chr13:37804004-37803750 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 188
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 34, 79

Conread position: 8-275
Cow position: chr13:5758216-5758485 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 182
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 32, 100

Conread position: 8-275
Cow position: chr13:17292008-17292276 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 185
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 32, 160

Conread position: 8-278
Cow position: chr13:971768-972044 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 195
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 35, 185

Conread position: 8-282
Cow position: chr13:18058121-18058400 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 201
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 33, 251

Conread position: 8-282
Cow position: chr13:21287962-21288238 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 203
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 30, 107

Conread position: 8-310
Cow position: chr13:15192765-15193063 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 198
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 32, 109

Conread position: 8-329
Cow position: chr13:35659878-35659564 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 223
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 34, 121

Conread position: 9-163
Cow position: chr13:24376613-24376463 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 30, 53

Conread position: 9-269
Cow position: chr13:20288454-20288200 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 186
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 31, 108

Conread position: 9-271
Cow position: chr13:55316065-55316337 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 196
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 33, 158

Conread position: 9-278
Cow position: chr13:38283862-38284126 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 194
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 30, 58

Conread position: 10-271
Cow position: chr13:23856335-23856071 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 185
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 32, 117

Conread position: 12-244
Cow position: chr13:34555711-34555940 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 164
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 31, 65

Conread position: 14-254
Cow position: chr13:15194613-15194857 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 180
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 28, 153

Conread position: 14-272
Cow position: chr13:19279209-19278955 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 193
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 25, 7

Conread position: 15-279
Cow position: chr13:15884902-15885167 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 187
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 27, 236

Conread position: 15-280
Cow position: chr13:21135782-21136054 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 201
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 25, 108

Conread position: 21-254
Cow position: chr13:8402167-8401934 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 164
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 37, 8

Conread position: 22-292
Cow position: chr13:19320646-19320370 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 202
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 20, 119

Conread position: 24-181
Cow position: chr13:32826347-32826506 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 18, 0

Conread position: 26-314
Cow position: chr13:55728006-55727724 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 189
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 13, 79

Conread position: 27-272
Cow position: chr13:13196347-13196098 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 171
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 22, 94

Conread position: 28-257
Cow position: chr13:7265020-7265244 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 162
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 13, 56

Conread position: 29-281
Cow position: chr13:16714160-16714414 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 181
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 63, 75

Conread position: 38-260
Cow position: chr13:46329511-46329734 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 160
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 182, 0

Conread position: 38-306
Cow position: chr13:23526202-23525940 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 187
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 168, 41

Conread position: 40-268
Cow position: chr13:52477555-52477783 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 170
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 36, 42

Conread position: 41-275
Cow position: chr13:45073167-45073397 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 161
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 90, 40

Conread position: 43-245
Cow position: chr13:48862008-48862208 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 142
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 176, 122

Conread position: 57-265
Cow position: chr13:9981767-9981973 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 162, 108

Conread position: 57-286
Cow position: chr13:39939493-39939721 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 169
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 53, 108

Conread position: 61-281
Cow position: chr13:15757190-15756968 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 155
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 193, 44

Conread position: 67-288
Cow position: chr13:20314555-20314777 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 151
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 27, 57

Conread position: 70-279
Cow position: chr13:18197546-18197756 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 145
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 149, 81

Conread position: 75-271
Cow position: chr13:19007988-19007796 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 144, 89

Conread position: 76-254
Cow position: chr13:18181718-18181897 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 128
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 143, 0

Conread position: 76-271
Cow position: chr13:35557050-35557251 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 138
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 77-320
Cow position: chr13:28440482-28440726 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 173
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 34, 5

Conread position: 78-272
Cow position: chr13:25504586-25504391 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 134
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 141, 45

Conread position: 81-271
Cow position: chr13:17611500-17611691 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 141
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 138, 148

Conread position: 88-271
Cow position: chr13:55494477-55494664 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 20, 174

Conread position: 95-272
Cow position: chr13:38035872-38035698 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 124, 26

Show alignments to all cow chromosomes.