Cow genome map

Conread name: Ovi1-UMC-pd3ov2-001-c12

Conread position: 1-114
Cow position: chr14:19633368-19633253 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 1-235
Cow position: chr14:33338291-33338521 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 156
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 104, 38

Conread position: 1-255
Cow position: chr14:8784371-8784135 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 177
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 39, 76

Conread position: 1-257
Cow position: chr14:39778939-39778684 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 178
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 41, 59

Conread position: 1-260
Cow position: chr14:16256955-16256688 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 190
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 41, 77

Conread position: 1-260
Cow position: chr14:16760585-16760328 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 187
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 38, 82

Conread position: 1-260
Cow position: chr14:27848387-27848114 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 204
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 39, 86

Conread position: 1-260
Cow position: chr14:33751711-33751467 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 188
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 38, 71

Conread position: 1-261
Cow position: chr14:16834524-16834250 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 181
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 1-264
Cow position: chr14:35018566-35018829 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 188
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 37, 86

Conread position: 1-266
Cow position: chr14:15997578-15997841 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 196
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 30, 44

Conread position: 1-268
Cow position: chr14:32371557-32371820 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 183
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 37, 20

Conread position: 1-269
Cow position: chr14:33791375-33791111 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 190
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 38, 107

Conread position: 1-269
Cow position: chr14:34199655-34199924 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 189
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 17, 112

Conread position: 1-271
Cow position: chr14:20110534-20110805 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 194
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 41, 90

Conread position: 1-271
Cow position: chr14:33247244-33247510 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 184
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 30, 80

Conread position: 1-272
Cow position: chr14:19189225-19188959 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 192
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 41, 57

Conread position: 1-272
Cow position: chr14:22989221-22988950 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 194
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 39, 19

Conread position: 1-272
Cow position: chr14:41211042-41210771 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 86

Conread position: 1-272
Cow position: chr14:42154775-42155058 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 197
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 37, 166

Conread position: 1-272
Cow position: chr14:48427262-48426991 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 124

Conread position: 1-278
Cow position: chr14:18345545-18345817 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 203
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 38, 81

Conread position: 1-279
Cow position: chr14:26433055-26433331 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 196
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 55, 43

Conread position: 1-281
Cow position: chr14:15054800-15055084 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 187
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 41, 0

Conread position: 1-281
Cow position: chr14:19372530-19372250 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 201
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 40, 124

Conread position: 1-281
Cow position: chr14:20640438-20640721 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 167

Conread position: 1-301
Cow position: chr14:1646003-1646297 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 217
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 41, 113

Conread position: 1-306
Cow position: chr14:37131844-37131543 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 197

Conread position: 1-307
Cow position: chr14:8750264-8749961 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 212
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 41, 168

Conread position: 1-334
Cow position: chr14:24608155-24607829 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 232
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 41, 173

Conread position: 2-113
Cow position: chr14:41966428-41966316 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 77

Conread position: 2-151
Cow position: chr14:36289612-36289762 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 30, 77

Conread position: 2-255
Cow position: chr14:15492784-15492527 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 189
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 40, 0

Conread position: 2-260
Cow position: chr14:24796239-24796505 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 185
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 40, 126

Conread position: 2-260
Cow position: chr14:33714495-33714744 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 183
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 37, 65

Conread position: 2-271
Cow position: chr14:41749570-41749840 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 195
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 37, 102

Conread position: 2-272
Cow position: chr14:28114998-28115270 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 194
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 38, 116

Conread position: 2-272
Cow position: chr14:48838783-48838513 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 192
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 38, 105

Conread position: 2-275
Cow position: chr14:16549816-16550090 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 189
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 44, 115

Conread position: 2-278
Cow position: chr14:17841101-17841378 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 181
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 38, 228

Conread position: 2-280
Cow position: chr14:10078455-10078175 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 200
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 217, 104

Conread position: 2-280
Cow position: chr14:21933153-21933434 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 192
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 40, 83

Conread position: 2-280
Cow position: chr14:26442154-26442432 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 201
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 119, 181

Conread position: 2-280
Cow position: chr14:33830485-33830212 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 192
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 29, 130

Conread position: 2-281
Cow position: chr14:19618564-19618844 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 191
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 38, 92

Conread position: 2-281
Cow position: chr14:29632698-29632973 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 191
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 38, 75

Conread position: 2-282
Cow position: chr14:24237013-24236731 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 191
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 31, 83

Conread position: 2-283
Cow position: chr14:40433108-40432834 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 192
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 38, 104

Conread position: 3-114
Cow position: chr14:41128080-41127968 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 3-190
Cow position: chr14:33828348-33828162 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 134
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 28, 114

Conread position: 3-192
Cow position: chr14:42596567-42596381 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 36, 77

Conread position: 3-253
Cow position: chr14:39770046-39770291 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 175
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 39, 103

Conread position: 3-262
Cow position: chr14:25385701-25385959 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 170
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 216, 126

Conread position: 3-272
Cow position: chr14:23080578-23080838 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 191
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 39, 12

Conread position: 3-272
Cow position: chr14:45605278-45605014 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 179
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 37, 114

Conread position: 3-278
Cow position: chr14:19129698-19129416 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 193
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 28, 0

Conread position: 3-280
Cow position: chr14:16033195-16032920 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 182
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 41, 175

Conread position: 3-280
Cow position: chr14:40165609-40165334 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 186
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 32, 113

Conread position: 3-281
Cow position: chr14:4227016-4227317 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 203
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 33, 251

Conread position: 3-285
Cow position: chr14:47672698-47672977 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 199
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 34, 117

Conread position: 3-297
Cow position: chr14:24981644-24981353 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 203
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 35, 117

Conread position: 3-307
Cow position: chr14:20384796-20385099 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 197
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 36, 123

Conread position: 3-334
Cow position: chr14:25779278-25778955 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 224
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 30, 70

Conread position: 4-139
Cow position: chr14:8495338-8495201 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 4-224
Cow position: chr14:26190913-26191139 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 154
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 31, 55

Conread position: 4-267
Cow position: chr14:11615036-11615301 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 171
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 119, 33

Conread position: 4-269
Cow position: chr14:13042942-13042676 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 194
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 34, 128

Conread position: 4-271
Cow position: chr14:45677409-45677145 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 186
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 35, 64

Conread position: 4-282
Cow position: chr14:23682449-23682170 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 186
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 39, 30

Conread position: 5-271
Cow position: chr14:13846172-13845903 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 186
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 33, 99

Conread position: 5-277
Cow position: chr14:4877046-4877317 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 191
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 26, 114

Conread position: 7-272
Cow position: chr14:18309116-18309391 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 185
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 104, 163

Conread position: 7-279
Cow position: chr14:20600572-20600298 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 191
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 13, 89

Conread position: 7-308
Cow position: chr14:10630942-10631237 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 218
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 28, 71

Conread position: 8-246
Cow position: chr14:24417066-24416820 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 166
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 31, 76

Conread position: 8-254
Cow position: chr14:27591772-27592021 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 176
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 12, 28

Conread position: 8-266
Cow position: chr14:13810120-13809863 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 180
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 30, 152

Conread position: 8-275
Cow position: chr14:24387630-24387356 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 181
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 33, 115

Conread position: 8-309
Cow position: chr14:4991180-4990880 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 207
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 34, 62

Conread position: 9-106
Cow position: chr14:11819942-11820041 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 9-254
Cow position: chr14:39774870-39775115 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 173
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 9, 58

Conread position: 9-282
Cow position: chr14:34984044-34983771 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 186
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 33, 90

Conread position: 15-278
Cow position: chr14:49021727-49021987 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 178
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 16, 89

Conread position: 30-280
Cow position: chr14:42437184-42436933 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 170
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 10, 127

Conread position: 31-308
Cow position: chr14:5633781-5634064 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 191
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 79, 91

Conread position: 38-267
Cow position: chr14:29698208-29698438 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 162
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 152, 47

Conread position: 38-272
Cow position: chr14:37422638-37422864 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 155
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 144, 0

Conread position: 53-260
Cow position: chr14:24945356-24945563 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 143
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 166, 32

Conread position: 76-299
Cow position: chr14:5557007-5557232 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 153
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 145, 0

Conread position: 86-263
Cow position: chr14:41837770-41837947 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 128
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 134, 33

Show alignments to all cow chromosomes.