Cow genome map
| Conread name: | Ovi1-UMC-pd3ov2-001-c12 |
| Conread position: | 1-110 |
| Cow position: | chr21:27810325-27810436 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 92 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 1-114 |
| Cow position: | chr21:14515768-14515884 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 93 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 1-120 |
| Cow position: | chr21:42348757-42348638 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 101 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 39, 103 |
| Conread position: | 1-131 |
| Cow position: | chr21:12617054-12617186 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 1-131 |
| Cow position: | chr21:21216224-21216094 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-133 |
| Cow position: | chr21:23822084-23822217 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 38, 105 |
| Conread position: | 1-139 |
| Cow position: | chr21:41957259-41957119 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 41, 122 |
| Conread position: | 1-153 |
| Cow position: | chr21:47066980-47066828 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 40, 86 |
| Conread position: | 1-163 |
| Cow position: | chr21:12960982-12960819 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 41, 90 |
| Conread position: | 1-173 |
| Cow position: | chr21:18041931-18041758 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 41, 122 |
| Conread position: | 1-192 |
| Cow position: | chr21:2904556-2904370 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 38, 52 |
| Conread position: | 1-192 |
| Cow position: | chr21:4795144-4795334 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 41, 33 |
| Conread position: | 1-196 |
| Cow position: | chr21:2679473-2679669 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 39, 86 |
| Conread position: | 1-196 |
| Cow position: | chr21:20262416-20262223 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 41, 60 |
| Conread position: | 1-196 |
| Cow position: | chr21:23150104-23149909 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 41, 55 |
| Conread position: | 1-205 |
| Cow position: | chr21:17856464-17856665 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 172, 33 |
| Conread position: | 1-210 |
| Cow position: | chr21:2367251-2367458 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 41, 105 |
| Conread position: | 1-235 |
| Cow position: | chr21:42540299-42540070 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 40, 58 |
| Conread position: | 1-244 |
| Cow position: | chr21:45330687-45330446 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 36, 117 |
| Conread position: | 1-246 |
| Cow position: | chr21:29214234-29213997 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 218, 40 |
| Conread position: | 1-248 |
| Cow position: | chr21:36789714-36789961 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 123, 47 |
| Conread position: | 1-258 |
| Cow position: | chr21:31090503-31090260 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 79, 43 |
| Conread position: | 1-259 |
| Cow position: | chr21:20160600-20160852 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 155, 35 |
| Conread position: | 1-259 |
| Cow position: | chr21:31691399-31691658 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 40, 164 |
| Conread position: | 1-260 |
| Cow position: | chr21:25764555-25764812 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 189 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 41, 66 |
| Conread position: | 1-260 |
| Cow position: | chr21:29069412-29069149 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 190 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 1-268 |
| Cow position: | chr21:24598578-24598843 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 38, 74 |
| Conread position: | 1-268 |
| Cow position: | chr21:27229878-27229611 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 10, 186 |
| Conread position: | 1-269 |
| Cow position: | chr21:22860916-22861186 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 38, 212 |
| Conread position: | 1-271 |
| Cow position: | chr21:957589-957861 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 37, 55 |
| Conread position: | 1-271 |
| Cow position: | chr21:12462053-12461778 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 1-271 |
| Cow position: | chr21:30592387-30592122 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 35, 81 |
| Conread position: | 1-271 |
| Cow position: | chr21:36297407-36297683 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 197 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 1-271 |
| Cow position: | chr21:44825968-44825697 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 198 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 41, 82 |
| Conread position: | 1-272 |
| Cow position: | chr21:802378-802127 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 38, 56 |
| Conread position: | 1-272 |
| Cow position: | chr21:5392622-5392347 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 41, 24 |
| Conread position: | 1-272 |
| Cow position: | chr21:33263766-33264034 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 186 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 35, 73 |
| Conread position: | 1-274 |
| Cow position: | chr21:29002241-29001965 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 41, 124 |
| Conread position: | 1-274 |
| Cow position: | chr21:34653994-34654265 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 85 |
| Conread position: | 1-277 |
| Cow position: | chr21:24858232-24858508 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 35, 76 |
| Conread position: | 1-278 |
| Cow position: | chr21:33982888-33982617 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 38, 116 |
| Conread position: | 1-279 |
| Cow position: | chr21:17183837-17184112 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 39, 119 |
| Conread position: | 1-279 |
| Cow position: | chr21:29484896-29485173 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 205 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 41, 185 |
| Conread position: | 1-279 |
| Cow position: | chr21:30250273-30250009 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 41, 57 |
| Conread position: | 1-280 |
| Cow position: | chr21:37299386-37299660 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 106, 36 |
| Conread position: | 1-280 |
| Cow position: | chr21:45906704-45906426 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 43, 117 |
| Conread position: | 1-281 |
| Cow position: | chr21:724969-724681 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 41, 184 |
| Conread position: | 1-281 |
| Cow position: | chr21:44658499-44658764 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 41, 86 |
| Conread position: | 1-282 |
| Cow position: | chr21:12801830-12801545 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 202 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 39, 52 |
| Conread position: | 1-282 |
| Cow position: | chr21:28733995-28733713 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 104, 122 |
| Conread position: | 1-299 |
| Cow position: | chr21:35569462-35569142 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 116, 181 |
| Conread position: | 1-303 |
| Cow position: | chr21:20260404-20260101 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 241 |
| Conread position: | 1-306 |
| Cow position: | chr21:395787-396094 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 41, 117 |
| Conread position: | 1-306 |
| Cow position: | chr21:27624626-27624918 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 211 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 41, 103 |
| Conread position: | 1-311 |
| Cow position: | chr21:13365255-13365568 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 223 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 41, 160 |
| Conread position: | 1-338 |
| Cow position: | chr21:18800612-18800285 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 38, 75 |
| Conread position: | 2-119 |
| Cow position: | chr21:45375541-45375659 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 40, 32 |
| Conread position: | 2-121 |
| Cow position: | chr21:33210120-33210242 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 2-128 |
| Cow position: | chr21:48251108-48250982 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 37, 32 |
| Conread position: | 2-136 |
| Cow position: | chr21:43357343-43357207 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 35, 93 |
| Conread position: | 2-139 |
| Cow position: | chr21:32453766-32453900 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 30, 7 |
| Conread position: | 2-145 |
| Cow position: | chr21:18494887-18495031 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 40, 112 |
| Conread position: | 2-154 |
| Cow position: | chr21:912049-911896 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 37, 119 |
| Conread position: | 2-205 |
| Cow position: | chr21:18845097-18844891 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 2-205 |
| Cow position: | chr21:44515181-44515385 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 38, 62 |
| Conread position: | 2-232 |
| Cow position: | chr21:34391057-34390826 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 37, 116 |
| Conread position: | 2-233 |
| Cow position: | chr21:16187891-16187657 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 7, 82 |
| Conread position: | 2-233 |
| Cow position: | chr21:18842316-18842087 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 38, 67 |
| Conread position: | 2-246 |
| Cow position: | chr21:18850308-18850060 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 40, 19 |
| Conread position: | 2-253 |
| Cow position: | chr21:35354451-35354703 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 40, 106 |
| Conread position: | 2-260 |
| Cow position: | chr21:18828388-18828126 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 40, 235 |
| Conread position: | 2-260 |
| Cow position: | chr21:40589561-40589305 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 166, 33 |
| Conread position: | 2-268 |
| Cow position: | chr21:22465115-22465376 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 40, 86 |
| Conread position: | 2-271 |
| Cow position: | chr21:33562931-33563190 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 30, 76 |
| Conread position: | 2-272 |
| Cow position: | chr21:4399715-4399995 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 35, 139 |
| Conread position: | 2-275 |
| Cow position: | chr21:7673044-7673311 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 40, 69 |
| Conread position: | 2-275 |
| Cow position: | chr21:27863598-27863321 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 34, 81 |
| Conread position: | 2-277 |
| Cow position: | chr21:29978838-29978564 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 187 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 38, 52 |
| Conread position: | 2-278 |
| Cow position: | chr21:39403619-39403331 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 35, 273 |
| Conread position: | 2-279 |
| Cow position: | chr21:9416164-9416442 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 194 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 29, 125 |
| Conread position: | 2-279 |
| Cow position: | chr21:32339820-32339545 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 36, 116 |
| Conread position: | 2-280 |
| Cow position: | chr21:32297589-32297323 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 40, 77 |
| Conread position: | 2-281 |
| Cow position: | chr21:3361093-3360818 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 32, 11 |
| Conread position: | 2-281 |
| Cow position: | chr21:9990434-9990709 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 206 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 38, 57 |
| Conread position: | 2-282 |
| Cow position: | chr21:42135702-42135416 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 2-283 |
| Cow position: | chr21:6833966-6834248 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 34, 114 |
| Conread position: | 2-302 |
| Cow position: | chr21:24642436-24642729 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 35, 123 |
| Conread position: | 2-312 |
| Cow position: | chr21:42384427-42384734 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 206 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 33, 117 |
| Conread position: | 2-319 |
| Cow position: | chr21:28626158-28626471 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 216 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 40, 157 |
| Conread position: | 2-323 |
| Cow position: | chr21:10633723-10633401 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 29, 185 |
| Conread position: | 2-324 |
| Cow position: | chr21:27569242-27568930 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 107, 39 |
| Conread position: | 2-331 |
| Cow position: | chr21:10561666-10561330 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 220 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 40, 116 |
| Conread position: | 3-167 |
| Cow position: | chr21:21077245-21077409 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 37, 98 |
| Conread position: | 3-206 |
| Cow position: | chr21:20192816-20193016 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 41, 115 |
| Conread position: | 3-215 |
| Cow position: | chr21:33997307-33997096 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 37, 22 |
| Conread position: | 3-254 |
| Cow position: | chr21:15911318-15911571 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 27, 184 |
| Conread position: | 3-254 |
| Cow position: | chr21:38121020-38121272 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 39, 74 |
| Conread position: | 3-260 |
| Cow position: | chr21:7581987-7581728 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 36, 115 |
| Conread position: | 3-260 |
| Cow position: | chr21:10000993-10001252 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 30, 116 |
| Conread position: | 3-260 |
| Cow position: | chr21:10004966-10004709 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 37, 19 |
| Conread position: | 3-260 |
| Cow position: | chr21:28190951-28191209 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 39, 64 |
| Conread position: | 3-260 |
| Cow position: | chr21:30835281-30835540 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 29, 163 |
| Conread position: | 3-268 |
| Cow position: | chr21:8206691-8206954 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 117, 36 |
| Conread position: | 3-270 |
| Cow position: | chr21:38900697-38900960 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 37, 92 |
| Conread position: | 3-271 |
| Cow position: | chr21:643247-643513 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 39, 73 |
| Conread position: | 3-272 |
| Cow position: | chr21:11645051-11644775 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 3-274 |
| Cow position: | chr21:15584500-15584227 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 36, 115 |
| Conread position: | 3-275 |
| Cow position: | chr21:81998-82262 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 36, 110 |
| Conread position: | 3-275 |
| Cow position: | chr21:28989533-28989805 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 35, 72 |
| Conread position: | 3-280 |
| Cow position: | chr21:46956-47240 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 36, 235 |
| Conread position: | 3-280 |
| Cow position: | chr21:33350665-33350939 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 39, 58 |
| Conread position: | 3-281 |
| Cow position: | chr21:47465202-47464921 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 194 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 36, 26 |
| Conread position: | 3-282 |
| Cow position: | chr21:3585444-3585169 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 36, 61 |
| Conread position: | 3-282 |
| Cow position: | chr21:6051426-6051701 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 39, 89 |
| Conread position: | 4-131 |
| Cow position: | chr21:42024042-42024169 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 37, 91 |
| Conread position: | 4-155 |
| Cow position: | chr21:16612545-16612696 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 35, 56 |
| Conread position: | 4-214 |
| Cow position: | chr21:13488442-13488657 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 4-260 |
| Cow position: | chr21:11740196-11739943 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 215, 40 |
| Conread position: | 4-266 |
| Cow position: | chr21:30990350-30990105 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 35, 70 |
| Conread position: | 4-271 |
| Cow position: | chr21:30222264-30222536 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 38, 63 |
| Conread position: | 4-277 |
| Cow position: | chr21:23586800-23587076 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 36, 154 |
| Conread position: | 4-303 |
| Cow position: | chr21:36795520-36795821 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 34, 264 |
| Conread position: | 5-237 |
| Cow position: | chr21:19363542-19363306 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 33, 226 |
| Conread position: | 5-262 |
| Cow position: | chr21:12723081-12723330 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 34, 53 |
| Conread position: | 5-280 |
| Cow position: | chr21:42841677-42841401 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 50, 39 |
| Conread position: | 8-136 |
| Cow position: | chr21:3236448-3236578 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 8-252 |
| Cow position: | chr21:44214048-44214295 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 34, 118 |
| Conread position: | 8-270 |
| Cow position: | chr21:37479883-37480153 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 31, 69 |
| Conread position: | 8-272 |
| Cow position: | chr21:30849023-30848751 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 32, 7 |
| Conread position: | 8-274 |
| Cow position: | chr21:16569825-16570090 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 34, 121 |
| Conread position: | 8-280 |
| Cow position: | chr21:26244844-26245112 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 32, 74 |
| Conread position: | 8-280 |
| Cow position: | chr21:47764191-47763920 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 27, 112 |
| Conread position: | 9-244 |
| Cow position: | chr21:20418760-20418521 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 10-192 |
| Cow position: | chr21:23192588-23192401 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 10-257 |
| Cow position: | chr21:46264098-46264344 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 29, 63 |
| Conread position: | 10-260 |
| Cow position: | chr21:45262886-45262633 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 29, 78 |
| Conread position: | 10-272 |
| Cow position: | chr21:41590634-41590375 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 179 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 32, 67 |
| Conread position: | 10-278 |
| Cow position: | chr21:47719373-47719107 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 190 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 29, 46 |
| Conread position: | 12-269 |
| Cow position: | chr21:8349256-8349515 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 30, 195 |
| Conread position: | 12-274 |
| Cow position: | chr21:38449519-38449257 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 28, 154 |
| Conread position: | 12-282 |
| Cow position: | chr21:40266049-40266323 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 22, 109 |
| Conread position: | 15-275 |
| Cow position: | chr21:641514-641782 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 18, 112 |
| Conread position: | 21-218 |
| Cow position: | chr21:297689-297888 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 5, 47 |
| Conread position: | 21-261 |
| Cow position: | chr21:32559422-32559187 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 21, 66 |
| Conread position: | 22-269 |
| Cow position: | chr21:8426379-8426634 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 20, 107 |
| Conread position: | 27-271 |
| Cow position: | chr21:868982-868736 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 14, 68 |
| Conread position: | 30-163 |
| Cow position: | chr21:41598064-41598199 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 33-232 |
| Cow position: | chr21:30607137-30606937 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 71, 5 |
| Conread position: | 34-280 |
| Cow position: | chr21:41522457-41522217 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 8, 91 |
| Conread position: | 38-279 |
| Cow position: | chr21:22014143-22014385 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 69, 55 |
| Conread position: | 38-282 |
| Cow position: | chr21:47363782-47363535 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 131, 219 |
| Conread position: | 57-271 |
| Cow position: | chr21:71563-71774 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 52, 21 |
| Conread position: | 57-271 |
| Cow position: | chr21:28030263-28030475 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 162, 64 |
| Conread position: | 76-245 |
| Cow position: | chr21:20183065-20183233 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 143, 40 |
| Conread position: | 76-272 |
| Cow position: | chr21:30980584-30980388 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 144, 45 |
| Conread position: | 80-280 |
| Cow position: | chr21:46599357-46599553 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 139, 153 |
| Conread position: | 93-279 |
| Cow position: | chr21:36682332-36682520 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 12, 174 |
| Conread position: | 109-281 |
| Cow position: | chr21:20163734-20163906 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 110, 12 |
Show alignments to all cow chromosomes.