Cow genome map

Conread name: Ovi1-UMC-pd3ov2-001-c12

Conread position: 1-154
Cow position: chr24:11876714-11876870 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 41, 0

Conread position: 1-154
Cow position: chr24:35794907-35794753 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 38, 76

Conread position: 1-155
Cow position: chr24:29027873-29028024 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 104

Conread position: 1-161
Cow position: chr24:29180717-29180879 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 130
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 41, 120

Conread position: 1-181
Cow position: chr24:30178064-30178250 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 39, 0

Conread position: 1-195
Cow position: chr24:6487752-6487939 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 151
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 41, 70

Conread position: 1-206
Cow position: chr24:39833683-39833481 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 142
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 38, 106

Conread position: 1-214
Cow position: chr24:39842020-39841807 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 151
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 40, 186

Conread position: 1-246
Cow position: chr24:7001235-7000989 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 174
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 41, 66

Conread position: 1-251
Cow position: chr24:3430563-3430813 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 177
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 41, 20

Conread position: 1-255
Cow position: chr24:40300988-40301241 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 179
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 37, 73

Conread position: 1-259
Cow position: chr24:10499043-10499302 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 181
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 38, 59

Conread position: 1-259
Cow position: chr24:27824287-27824550 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 190
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 95, 36

Conread position: 1-259
Cow position: chr24:31324110-31324372 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 182
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 41, 0

Conread position: 1-267
Cow position: chr24:23187088-23186823 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 195
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 38, 55

Conread position: 1-267
Cow position: chr24:24250557-24250819 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 193
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 41, 128

Conread position: 1-268
Cow position: chr24:15246806-15246545 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 182
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 10, 39

Conread position: 1-268
Cow position: chr24:37037728-37038000 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 196
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 113, 0

Conread position: 1-268
Cow position: chr24:39483306-39483570 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 191
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 41, 107

Conread position: 1-271
Cow position: chr24:5141773-5142042 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 105

Conread position: 1-271
Cow position: chr24:5754667-5754936 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 196
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 38, 75

Conread position: 1-271
Cow position: chr24:28062781-28063048 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 200
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 41, 94

Conread position: 1-271
Cow position: chr24:28496754-28496482 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 199
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 41, 94

Conread position: 1-271
Cow position: chr24:31359155-31359422 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 194
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 39, 64

Conread position: 1-272
Cow position: chr24:2402545-2402268 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 197
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 41, 143

Conread position: 1-272
Cow position: chr24:31816418-31816680 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 186
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 218, 16

Conread position: 1-274
Cow position: chr24:43927493-43927231 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 193
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 53, 43

Conread position: 1-275
Cow position: chr24:29781993-29782265 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 182
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 36, 117

Conread position: 1-276
Cow position: chr24:30314203-30313920 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 203
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 101

Conread position: 1-278
Cow position: chr24:3165650-3165929 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 199
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 125, 43

Conread position: 1-279
Cow position: chr24:33222113-33221823 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 1-280
Cow position: chr24:6912522-6912252 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 197
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 41, 60

Conread position: 1-280
Cow position: chr24:18474916-18474620 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 217
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 41, 127

Conread position: 1-280
Cow position: chr24:36404315-36404032 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 190
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 38, 218

Conread position: 1-280
Cow position: chr24:37650499-37650777 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 194
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 38, 223

Conread position: 1-281
Cow position: chr24:17104741-17104459 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 191
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 41, 20

Conread position: 1-281
Cow position: chr24:40129951-40130240 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 191
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 30, 118

Conread position: 1-288
Cow position: chr24:11886990-11887272 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 205
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 39, 46

Conread position: 1-325
Cow position: chr24:20874509-20874829 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 220
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 41, 124

Conread position: 2-115
Cow position: chr24:38347512-38347630 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 2-254
Cow position: chr24:39226832-39227077 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 182
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 40, 67

Conread position: 2-258
Cow position: chr24:43364189-43364445 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 177
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 31, 86

Conread position: 2-269
Cow position: chr24:30235703-30235968 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 194
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 40, 57

Conread position: 2-271
Cow position: chr24:18357223-18356951 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 195
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 37, 53

Conread position: 2-271
Cow position: chr24:44041183-44040907 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 188
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 35, 167

Conread position: 2-272
Cow position: chr24:1269628-1269886 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 199
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 40, 64

Conread position: 2-272
Cow position: chr24:32054489-32054762 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 184
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 35, 123

Conread position: 2-275
Cow position: chr24:32070796-32071066 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 188
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 38, 115

Conread position: 2-280
Cow position: chr24:24457416-24457140 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 198
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 35, 84

Conread position: 2-280
Cow position: chr24:25885330-25885049 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 201
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 10, 22

Conread position: 2-280
Cow position: chr24:29595981-29595695 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 191
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 26, 114

Conread position: 2-280
Cow position: chr24:29673349-29673630 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 184
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 32, 236

Conread position: 2-280
Cow position: chr24:34008748-34008463 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 182
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 2-306
Cow position: chr24:16556802-16556509 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 180
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 252, 35

Conread position: 3-119
Cow position: chr24:29540076-29539958 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 3-121
Cow position: chr24:17938593-17938713 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 39, 18

Conread position: 3-252
Cow position: chr24:30897707-30897457 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 232

Conread position: 3-255
Cow position: chr24:18025137-18024890 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 178
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 39, 32

Conread position: 3-260
Cow position: chr24:35576704-35576451 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 173
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 31, 116

Conread position: 3-272
Cow position: chr24:17311378-17311121 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 185
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 61, 0

Conread position: 3-275
Cow position: chr24:27748478-27748744 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 183
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 36, 84

Conread position: 3-278
Cow position: chr24:32204963-32204689 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 181
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 37, 120

Conread position: 3-279
Cow position: chr24:28990395-28990666 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 199
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 39, 64

Conread position: 3-280
Cow position: chr24:18970677-18970399 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 184
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 34, 115

Conread position: 4-271
Cow position: chr24:17955611-17955344 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 177
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 27, 112

Conread position: 4-275
Cow position: chr24:31812020-31812295 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 184
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 38, 84

Conread position: 4-277
Cow position: chr24:28327252-28326975 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 200
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 38, 73

Conread position: 4-281
Cow position: chr24:27608266-27608001 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 202
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 38, 52

Conread position: 4-306
Cow position: chr24:33153609-33153908 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 63

Conread position: 5-218
Cow position: chr24:211818-212033 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 151
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 37, 0

Conread position: 5-270
Cow position: chr24:43432625-43432888 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 185
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 32, 113

Conread position: 5-280
Cow position: chr24:18485164-18484888 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 187
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 37, 182

Conread position: 8-109
Cow position: chr24:27941173-27941070 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 8-174
Cow position: chr24:42007575-42007742 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 120
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 24, 111

Conread position: 8-251
Cow position: chr24:27726177-27725932 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 175
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 34, 12

Conread position: 8-266
Cow position: chr24:29063812-29063563 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 186
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 34, 59

Conread position: 8-268
Cow position: chr24:6132037-6131775 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 183
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 34, 79

Conread position: 8-272
Cow position: chr24:16509806-16510081 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 193
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 29, 111

Conread position: 8-274
Cow position: chr24:17860419-17860155 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 194
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 34, 59

Conread position: 8-280
Cow position: chr24:201798-201528 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 195
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 31, 58

Conread position: 8-284
Cow position: chr24:6450332-6450605 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 191
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 29, 143

Conread position: 8-323
Cow position: chr24:14171858-14171530 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 221
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 23, 162

Conread position: 10-278
Cow position: chr24:20943005-20943269 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 176
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 30, 113

Conread position: 11-264
Cow position: chr24:28319361-28319116 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 177
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 31, 62

Conread position: 11-272
Cow position: chr24:43028483-43028229 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 179
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 104, 32

Conread position: 16-298
Cow position: chr24:11119128-11119408 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 191
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 7, 93

Conread position: 16-307
Cow position: chr24:8006155-8006439 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 201
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 26, 79

Conread position: 17-262
Cow position: chr24:43967656-43967411 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 179
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 25, 101

Conread position: 20-271
Cow position: chr24:35675393-35675635 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 172
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 17, 75

Conread position: 22-272
Cow position: chr24:15057251-15057496 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 168
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 18, 86

Conread position: 30-303
Cow position: chr24:39791399-39791672 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 185
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 81, 92

Conread position: 33-272
Cow position: chr24:27713541-27713301 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 171
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 186, 32

Conread position: 38-281
Cow position: chr24:28233917-28234152 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 167
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 181, 55

Conread position: 43-260
Cow position: chr24:32095193-32095396 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 43-271
Cow position: chr24:29561701-29561474 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 158
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 69, 42

Conread position: 44-281
Cow position: chr24:39523573-39523340 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 157
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 176, 72

Conread position: 54-271
Cow position: chr24:37975097-37974880 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 153
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 165, 32

Conread position: 66-271
Cow position: chr24:230172-230386 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 157
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 99, 0

Conread position: 67-271
Cow position: chr24:37823427-37823626 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 144
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 152, 9

Conread position: 67-310
Cow position: chr24:30308660-30308419 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 167
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 47, 161

Conread position: 76-280
Cow position: chr24:13948027-13948231 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 143, 112

Conread position: 76-296
Cow position: chr24:28042878-28043098 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 153
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 43, 195

Conread position: 78-266
Cow position: chr24:116647-116459 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 137
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 141, 130

Conread position: 79-278
Cow position: chr24:27349271-27349069 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 145
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 36, 90

Show alignments to all cow chromosomes.