Cow genome map
| Conread name: | Ovi1-UMC-pd3ov2-001-c12 |
| Conread position: | 1-111 |
| Cow position: | chr28:10202340-10202448 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 91 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 41, 75 |
| Conread position: | 1-116 |
| Cow position: | chr28:11451605-11451488 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 30, 95 |
| Conread position: | 1-126 |
| Cow position: | chr28:8935796-8935920 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 41, 86 |
| Conread position: | 1-161 |
| Cow position: | chr28:15063476-15063321 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 41, 65 |
| Conread position: | 1-203 |
| Cow position: | chr28:3256656-3256858 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 37, 113 |
| Conread position: | 1-205 |
| Cow position: | chr28:7549200-7548996 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 38, 27 |
| Conread position: | 1-208 |
| Cow position: | chr28:4587958-4588162 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 38, 82 |
| Conread position: | 1-246 |
| Cow position: | chr28:2872776-2873023 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 38, 86 |
| Conread position: | 1-251 |
| Cow position: | chr28:2862724-2862977 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 189 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 41, 98 |
| Conread position: | 1-254 |
| Cow position: | chr28:3169333-3169077 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 41, 20 |
| Conread position: | 1-254 |
| Cow position: | chr28:16204470-16204221 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 39, 112 |
| Conread position: | 1-254 |
| Cow position: | chr28:18591132-18591382 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 40, 75 |
| Conread position: | 1-259 |
| Cow position: | chr28:13474161-13474417 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 193 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 41, 11 |
| Conread position: | 1-260 |
| Cow position: | chr28:3914568-3914835 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 1-260 |
| Cow position: | chr28:5128867-5128609 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 40, 59 |
| Conread position: | 1-260 |
| Cow position: | chr28:22345878-22346139 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 38, 81 |
| Conread position: | 1-262 |
| Cow position: | chr28:11527400-11527138 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 180 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 41, 82 |
| Conread position: | 1-267 |
| Cow position: | chr28:4834983-4834719 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 196 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 40, 81 |
| Conread position: | 1-271 |
| Cow position: | chr28:4158817-4159085 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 41, 76 |
| Conread position: | 1-271 |
| Cow position: | chr28:16370217-16369953 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 38, 76 |
| Conread position: | 1-272 |
| Cow position: | chr28:4884404-4884121 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 39, 66 |
| Conread position: | 1-272 |
| Cow position: | chr28:11884661-11884388 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 39, 117 |
| Conread position: | 1-272 |
| Cow position: | chr28:20124642-20124914 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 41, 117 |
| Conread position: | 1-272 |
| Cow position: | chr28:21868314-21868589 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 197 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 41, 117 |
| Conread position: | 1-272 |
| Cow position: | chr28:29416854-29416587 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 189 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 40, 53 |
| Conread position: | 1-272 |
| Cow position: | chr28:29989254-29988980 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 188 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 39, 86 |
| Conread position: | 1-272 |
| Cow position: | chr28:30937804-30937540 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 41, 79 |
| Conread position: | 1-274 |
| Cow position: | chr28:33051887-33052171 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-274 |
| Cow position: | chr28:34133721-34133993 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 38, 76 |
| Conread position: | 1-275 |
| Cow position: | chr28:3024053-3023778 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 39, 57 |
| Conread position: | 1-275 |
| Cow position: | chr28:4016397-4016665 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 38, 57 |
| Conread position: | 1-275 |
| Cow position: | chr28:11426683-11426409 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 123 |
| Conread position: | 1-276 |
| Cow position: | chr28:3746064-3746335 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 190 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 39, 86 |
| Conread position: | 1-276 |
| Cow position: | chr28:10172551-10172284 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 176, 43 |
| Conread position: | 1-278 |
| Cow position: | chr28:9636594-9636320 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 197 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 38, 61 |
| Conread position: | 1-280 |
| Cow position: | chr28:12964429-12964708 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 38, 19 |
| Conread position: | 1-281 |
| Cow position: | chr28:9285515-9285237 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 206 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 41, 192 |
| Conread position: | 1-281 |
| Cow position: | chr28:14997924-14998208 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 39, 20 |
| Conread position: | 1-284 |
| Cow position: | chr28:14649207-14649484 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 208 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 41, 140 |
| Conread position: | 1-288 |
| Cow position: | chr28:11829079-11828814 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 39, 77 |
| Conread position: | 1-320 |
| Cow position: | chr28:21844818-21845135 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 41, 68 |
| Conread position: | 2-114 |
| Cow position: | chr28:9108306-9108420 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 2-131 |
| Cow position: | chr28:23775909-23776036 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 2-192 |
| Cow position: | chr28:5074649-5074459 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 39, 12 |
| Conread position: | 2-205 |
| Cow position: | chr28:7751437-7751239 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 38, 61 |
| Conread position: | 2-211 |
| Cow position: | chr28:10534072-10533866 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 42, 36 |
| Conread position: | 2-238 |
| Cow position: | chr28:4536316-4536555 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 39, 106 |
| Conread position: | 2-242 |
| Cow position: | chr28:18186414-18186656 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 40, 141 |
| Conread position: | 2-255 |
| Cow position: | chr28:21380738-21380993 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 38, 227 |
| Conread position: | 2-259 |
| Cow position: | chr28:10863922-10863675 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 217, 42 |
| Conread position: | 2-263 |
| Cow position: | chr28:7865184-7865450 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 38, 118 |
| Conread position: | 2-269 |
| Cow position: | chr28:3492925-3492656 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 39, 117 |
| Conread position: | 2-271 |
| Cow position: | chr28:11752281-11752011 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 195 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 37, 65 |
| Conread position: | 2-271 |
| Cow position: | chr28:21363606-21363870 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 178 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 32, 116 |
| Conread position: | 2-272 |
| Cow position: | chr28:21355086-21355362 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 189 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 35, 17 |
| Conread position: | 2-272 |
| Cow position: | chr28:27161470-27161196 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 29, 19 |
| Conread position: | 2-272 |
| Cow position: | chr28:30746868-30746599 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 28, 95 |
| Conread position: | 2-275 |
| Cow position: | chr28:25249214-25249488 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 37, 116 |
| Conread position: | 2-280 |
| Cow position: | chr28:2752637-2752357 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 35, 9 |
| Conread position: | 2-281 |
| Cow position: | chr28:12430467-12430746 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 40, 93 |
| Conread position: | 2-288 |
| Cow position: | chr28:11422951-11422670 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 206 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 217, 35 |
| Conread position: | 2-303 |
| Cow position: | chr28:24966251-24966545 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 208 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 40, 59 |
| Conread position: | 2-306 |
| Cow position: | chr28:6971484-6971186 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 40, 59 |
| Conread position: | 3-128 |
| Cow position: | chr28:16253000-16252871 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 99 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 3-153 |
| Cow position: | chr28:13290271-13290117 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 36, 77 |
| Conread position: | 3-169 |
| Cow position: | chr28:13607748-13607914 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 102, 158 |
| Conread position: | 3-170 |
| Cow position: | chr28:7608119-7607949 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 3-268 |
| Cow position: | chr28:22571804-22571542 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 37, 74 |
| Conread position: | 3-270 |
| Cow position: | chr28:16085184-16085453 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 28, 80 |
| Conread position: | 3-271 |
| Cow position: | chr28:22500629-22500372 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 15, 42 |
| Conread position: | 3-272 |
| Cow position: | chr28:5204055-5204326 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 197 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 39, 10 |
| Conread position: | 3-275 |
| Cow position: | chr28:4070830-4071100 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 201 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 39, 110 |
| Conread position: | 3-275 |
| Cow position: | chr28:25596493-25596762 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 33, 56 |
| Conread position: | 3-278 |
| Cow position: | chr28:26220116-26220393 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 206 |
| Conread position: | 3-280 |
| Cow position: | chr28:4308048-4307761 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 31, 227 |
| Conread position: | 3-280 |
| Cow position: | chr28:26743479-26743767 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 32, 121 |
| Conread position: | 3-290 |
| Cow position: | chr28:11687168-11686883 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 39, 110 |
| Conread position: | 4-155 |
| Cow position: | chr28:657587-657439 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 38, 71 |
| Conread position: | 4-260 |
| Cow position: | chr28:23007872-23007612 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 4-260 |
| Cow position: | chr28:33163602-33163346 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 37, 164 |
| Conread position: | 4-262 |
| Cow position: | chr28:11585343-11585082 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 4-272 |
| Cow position: | chr28:30327229-30326963 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 35, 128 |
| Conread position: | 4-279 |
| Cow position: | chr28:2132057-2131786 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 111, 16 |
| Conread position: | 4-279 |
| Cow position: | chr28:5437226-5436953 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 195 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 38, 208 |
| Conread position: | 5-267 |
| Cow position: | chr28:34561213-34561467 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 36, 51 |
| Conread position: | 5-271 |
| Cow position: | chr28:33884271-33884529 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 37, 76 |
| Conread position: | 5-310 |
| Cow position: | chr28:25806434-25806736 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 204 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 32, 112 |
| Conread position: | 5-323 |
| Cow position: | chr28:8022246-8021924 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 199 |
| Conread position: | 5-323 |
| Cow position: | chr28:19026149-19025818 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 233 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 34, 164 |
| Conread position: | 6-110 |
| Cow position: | chr28:24996724-24996619 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 88 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 7-291 |
| Cow position: | chr28:12892568-12892289 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 192 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 35, 8 |
| Conread position: | 8-173 |
| Cow position: | chr28:5904598-5904762 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 34, 59 |
| Conread position: | 8-259 |
| Cow position: | chr28:21598388-21598133 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 36, 110 |
| Conread position: | 8-269 |
| Cow position: | chr28:616250-616510 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 31, 187 |
| Conread position: | 8-271 |
| Cow position: | chr28:4090182-4089928 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 31, 99 |
| Conread position: | 8-272 |
| Cow position: | chr28:6091229-6091494 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 32, 64 |
| Conread position: | 8-272 |
| Cow position: | chr28:8787405-8787671 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 31, 134 |
| Conread position: | 8-281 |
| Cow position: | chr28:24082133-24082409 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 207 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 36, 58 |
| Conread position: | 8-323 |
| Cow position: | chr28:5684576-5684877 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 31, 79 |
| Conread position: | 9-271 |
| Cow position: | chr28:2960965-2960701 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 29, 69 |
| Conread position: | 10-259 |
| Cow position: | chr28:11079175-11079418 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 28, 5 |
| Conread position: | 10-278 |
| Cow position: | chr28:8140350-8140619 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 32, 96 |
| Conread position: | 27-267 |
| Cow position: | chr28:25128768-25129011 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 11, 167 |
| Conread position: | 29-288 |
| Cow position: | chr28:5577412-5577672 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 13, 89 |
| Conread position: | 30-277 |
| Cow position: | chr28:23410434-23410189 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 162, 8 |
| Conread position: | 38-288 |
| Cow position: | chr28:4181900-4182147 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 13, 78 |
| Conread position: | 44-267 |
| Cow position: | chr28:13233205-13232989 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 175, 62 |
| Conread position: | 50-274 |
| Cow position: | chr28:7927084-7927305 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 51, 69 |
| Conread position: | 54-260 |
| Cow position: | chr28:10589109-10588904 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 165, 11 |
| Conread position: | 57-272 |
| Cow position: | chr28:7350574-7350785 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 162, 55 |
| Conread position: | 59-275 |
| Cow position: | chr28:5139078-5138860 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 54, 109 |
Show alignments to all cow chromosomes.