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Cow genome map

           
Conread name:
           
Ovi1-UMC-pd3ov2-001-c12
        

               
Conread position:
               
1-107
               

               
Cow position:
               
chr4:44072920-44072812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
1-110
               

               
Cow position:
               
chr4:11671301-11671411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
1-112
               

               
Cow position:
               
chr4:27292110-27291997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
1-127
               

               
Cow position:
               
chr4:36841129-36841259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
1-130
               

               
Cow position:
               
chr4:16602207-16602076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
1-131
               

               
Cow position:
               
chr4:46552474-46552347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
41, 105
               

               
Conread position:
               
1-162
               

               
Cow position:
               
chr4:33357780-33357943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
1-170
               

               
Cow position:
               
chr4:20299120-20299290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
41, 24
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr4:3689554-3689752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
38, 57
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr4:275309-275510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
41, 105
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr4:27540467-27540679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
38, 57
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr4:11331938-11332161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
39, 113
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr4:24744563-24744338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr4:66112227-66111994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr4:21233028-21232795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
39, 140
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr4:17112031-17111779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
37, 110
               

               
Conread position:
               
1-252
               

               
Cow position:
               
chr4:12049091-12049344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
37, 184
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr4:62983704-62983461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
38, 54
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr4:59277630-59277374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
41, 81
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr4:63459366-63459117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
41, 106
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr4:20327864-20327602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 152
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr4:14470724-14470464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
38, 72
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr4:10412224-10412484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
33, 68
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr4:17774508-17774235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr4:2141591-2141850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
37, 165
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr4:61897690-61897419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
45, 108
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr4:63096227-63095960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
33, 95
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr4:66172952-66172675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
39, 64
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr4:7430169-7430435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
38, 85
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr4:19597470-19597207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
41, 100
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr4:31136597-31136871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
43, 170
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr4:4185970-4186236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
38, 82
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr4:16593929-16594198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
30, 75
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr4:21391967-21391694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 159
               

               
Conread position:
               
1-272
               

               
Cow position:
               
chr4:26659150-26659419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
39, 93
               

               
Conread position:
               
1-272
               

               
Cow position:
               
chr4:28839471-28839735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
11, 108
               

               
Conread position:
               
1-272
               

               
Cow position:
               
chr4:38935202-38935475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
37, 232
               

               
Conread position:
               
1-272
               

               
Cow position:
               
chr4:38944415-38944139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
41, 169
               

               
Conread position:
               
1-272
               

               
Cow position:
               
chr4:40414782-40414509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
41, 64
               

               
Conread position:
               
1-272
               

               
Cow position:
               
chr4:48961634-48961369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
41, 78
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr4:54479058-54478802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
41, 62
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr4:3850402-3850670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
218, 43
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr4:33433418-33433135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr4:19435106-19435377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
41, 8
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr4:52748612-52748332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
41, 186
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr4:9815502-9815222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
41, 113
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr4:11194031-11194308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
33, 69
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr4:33612513-33612239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
43, 117
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr4:51727922-51728203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 122
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr4:51851047-51851337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
28, 91
               

               
Conread position:
               
1-279
               

               
Cow position:
               
chr4:10915991-10915711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
41, 58
               

               
Conread position:
               
1-279
               

               
Cow position:
               
chr4:48152518-48152251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
39, 33
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr4:3340797-3341076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
41, 124
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr4:7808432-7808700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
218, 43
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr4:21531798-21531521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
41, 86
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr4:35981839-35982123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
41, 232
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr4:36893203-36893487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr4:46550234-46550511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
38, 66
               

               
Conread position:
               
1-281
               

               
Cow position:
               
chr4:3421473-3421750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
38, 77
               

               
Conread position:
               
1-281
               

               
Cow position:
               
chr4:13693828-13693550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
41, 239
               

               
Conread position:
               
1-281
               

               
Cow position:
               
chr4:20147032-20147311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
38, 28
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr4:34022741-34022454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr4:19501238-19500958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
39, 54
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr4:46591510-46591812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
30, 170
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr4:8947239-8947532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
41, 84
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr4:19322237-19321929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
31, 269
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr4:45367579-45367889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
36, 147
               

               
Conread position:
               
1-314
               

               
Cow position:
               
chr4:47348673-47348988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
38, 165
               

               
Conread position:
               
1-317
               

               
Cow position:
               
chr4:65919459-65919775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
41, 135
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr4:33097130-33096813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
41, 102
               

               
Conread position:
               
1-329
               

               
Cow position:
               
chr4:17186507-17186180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
41, 142
               

               
Conread position:
               
2-110
               

               
Cow position:
               
chr4:36724885-36724995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
2-127
               

               
Cow position:
               
chr4:27687770-27687898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
2-136
               

               
Cow position:
               
chr4:43370007-43369870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
29, 134
               

               
Conread position:
               
2-139
               

               
Cow position:
               
chr4:31506185-31506045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
2-149
               

               
Cow position:
               
chr4:18576926-18576776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
2-151
               

               
Cow position:
               
chr4:5999342-5999194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
2-154
               

               
Cow position:
               
chr4:11099822-11099668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
2-167
               

               
Cow position:
               
chr4:24458252-24458091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
39, 56
               

               
Conread position:
               
2-214
               

               
Cow position:
               
chr4:15439426-15439635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
36, 7
               

               
Conread position:
               
2-214
               

               
Cow position:
               
chr4:42673022-42673235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
2-259
               

               
Cow position:
               
chr4:5461015-5460757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
29, 71
               

               
Conread position:
               
2-260
               

               
Cow position:
               
chr4:53100656-53100907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
111, 40
               

               
Conread position:
               
2-268
               

               
Cow position:
               
chr4:53208142-53208408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
37, 98
               

               
Conread position:
               
2-269
               

               
Cow position:
               
chr4:44449659-44449395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
11, 7
               

               
Conread position:
               
2-270
               

               
Cow position:
               
chr4:36290475-36290741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
39, 116
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr4:16881516-16881244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
38, 115
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr4:37915491-37915218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
38, 166
               

               
Conread position:
               
2-272
               

               
Cow position:
               
chr4:19744732-19744994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
40, 173
               

               
Conread position:
               
2-272
               

               
Cow position:
               
chr4:42423951-42423686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
217, 46
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr4:45738631-45738356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
55, 266
               

               
Conread position:
               
2-275
               

               
Cow position:
               
chr4:45768-46026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
40, 27
               

               
Conread position:
               
2-278
               

               
Cow position:
               
chr4:22010214-22009936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
82, 40
               

               
Conread position:
               
2-279
               

               
Cow position:
               
chr4:68764362-68764641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
29, 112
               

               
Conread position:
               
2-280
               

               
Cow position:
               
chr4:13974122-13973841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
35, 90
               

               
Conread position:
               
2-280
               

               
Cow position:
               
chr4:23509439-23509716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
29, 185
               

               
Conread position:
               
2-280
               

               
Cow position:
               
chr4:30974187-30974457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
38, 113
               

               
Conread position:
               
2-280
               

               
Cow position:
               
chr4:59377761-59378036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
37, 85
               

               
Conread position:
               
2-281
               

               
Cow position:
               
chr4:27529964-27530244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
40, 95
               

               
Conread position:
               
2-281
               

               
Cow position:
               
chr4:62471919-62472205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
40, 119
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr4:23847201-23846923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
40, 135
               

               
Conread position:
               
2-296
               

               
Cow position:
               
chr4:34641879-34641583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
9, 20
               

               
Conread position:
               
2-322
               

               
Cow position:
               
chr4:44612849-44613170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
35, 108
               

               
Conread position:
               
2-323
               

               
Cow position:
               
chr4:30791815-30792136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
32, 89
               

               
Conread position:
               
3-145
               

               
Cow position:
               
chr4:561253-561390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
3-192
               

               
Cow position:
               
chr4:19463343-19463533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
39, 115
               

               
Conread position:
               
3-244
               

               
Cow position:
               
chr4:21257277-21257034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
38, 62
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr4:54111595-54111841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
39, 117
               

               
Conread position:
               
3-257
               

               
Cow position:
               
chr4:20139673-20139414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
39, 15
               

               
Conread position:
               
3-263
               

               
Cow position:
               
chr4:27276698-27276435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
28, 131
               

               
Conread position:
               
3-270
               

               
Cow position:
               
chr4:25888982-25888718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
32, 59
               

               
Conread position:
               
3-270
               

               
Cow position:
               
chr4:51768960-51769219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
35, 49
               

               
Conread position:
               
3-272
               

               
Cow position:
               
chr4:34630742-34631018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
3-273
               

               
Cow position:
               
chr4:21064886-21065152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
39, 20
               

               
Conread position:
               
3-275
               

               
Cow position:
               
chr4:8413270-8413003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
36, 7
               

               
Conread position:
               
3-277
               

               
Cow position:
               
chr4:29291367-29291638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
35, 113
               

               
Conread position:
               
3-280
               

               
Cow position:
               
chr4:41867292-41867561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
36, 70
               

               
Conread position:
               
3-281
               

               
Cow position:
               
chr4:7571258-7571536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
39, 31
               

               
Conread position:
               
3-281
               

               
Cow position:
               
chr4:58248252-58248529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
39, 15
               

               
Conread position:
               
3-282
               

               
Cow position:
               
chr4:47730706-47730983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
39, 24
               

               
Conread position:
               
3-284
               

               
Cow position:
               
chr4:54190936-54191220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
37, 122
               

               
Conread position:
               
3-288
               

               
Cow position:
               
chr4:43515574-43515850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
32, 116
               

               
Conread position:
               
3-303
               

               
Cow position:
               
chr4:51784026-51784327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
41, 121
               

               
Conread position:
               
3-306
               

               
Cow position:
               
chr4:10378956-10379265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 285
               

               
Conread position:
               
3-306
               

               
Cow position:
               
chr4:58881115-58880810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 248
               

               
Conread position:
               
3-307
               

               
Cow position:
               
chr4:37704114-37704416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
38, 203
               

               
Conread position:
               
4-151
               

               
Cow position:
               
chr4:19438309-19438461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
35, 71
               

               
Conread position:
               
4-260
               

               
Cow position:
               
chr4:55395609-55395867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
33, 216
               

               
Conread position:
               
4-265
               

               
Cow position:
               
chr4:42922003-42921750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
32, 84
               

               
Conread position:
               
4-269
               

               
Cow position:
               
chr4:54455494-54455230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
35, 114
               

               
Conread position:
               
4-271
               

               
Cow position:
               
chr4:13344395-13344656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
35, 71
               

               
Conread position:
               
4-273
               

               
Cow position:
               
chr4:41371091-41370819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
36, 19
               

               
Conread position:
               
4-278
               

               
Cow position:
               
chr4:22713642-22713369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
27, 124
               

               
Conread position:
               
4-279
               

               
Cow position:
               
chr4:62772076-62771795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
36, 119
               

               
Conread position:
               
4-281
               

               
Cow position:
               
chr4:23600027-23600295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
14, 64
               

               
Conread position:
               
4-293
               

               
Cow position:
               
chr4:36731043-36731327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
30, 106
               

               
Conread position:
               
4-307
               

               
Cow position:
               
chr4:45644459-45644167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
36, 91
               

               
Conread position:
               
5-176
               

               
Cow position:
               
chr4:47047743-47047916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
5-190
               

               
Cow position:
               
chr4:17124446-17124257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
5-211
               

               
Cow position:
               
chr4:51898857-51899062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
37, 148
               

               
Conread position:
               
5-260
               

               
Cow position:
               
chr4:22860862-22860605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
35, 173
               

               
Conread position:
               
5-260
               

               
Cow position:
               
chr4:48485854-48486100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
34, 69
               

               
Conread position:
               
5-268
               

               
Cow position:
               
chr4:68889707-68889446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
32, 76
               

               
Conread position:
               
5-272
               

               
Cow position:
               
chr4:4084598-4084333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
33, 80
               

               
Conread position:
               
5-274
               

               
Cow position:
               
chr4:19582767-19582497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
37, 87
               

               
Conread position:
               
7-282
               

               
Cow position:
               
chr4:20027249-20026974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
30, 60
               

               
Conread position:
               
7-293
               

               
Cow position:
               
chr4:49089640-49089925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
11, 21
               

               
Conread position:
               
8-254
               

               
Cow position:
               
chr4:48409413-48409169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
126, 36
               

               
Conread position:
               
8-262
               

               
Cow position:
               
chr4:56570658-56570914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
28, 111
               

               
Conread position:
               
8-272
               

               
Cow position:
               
chr4:33971045-33970779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
149, 47
               

               
Conread position:
               
8-279
               

               
Cow position:
               
chr4:12903671-12903946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
8-280
               

               
Cow position:
               
chr4:509050-508783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
25, 59
               

               
Conread position:
               
8-306
               

               
Cow position:
               
chr4:36577777-36577479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
34, 95
               

               
Conread position:
               
9-269
               

               
Cow position:
               
chr4:3687777-3688047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
30, 86
               

               
Conread position:
               
9-274
               

               
Cow position:
               
chr4:19408146-19407877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
33, 204
               

               
Conread position:
               
9-278
               

               
Cow position:
               
chr4:19097143-19097410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 56
               

               
Conread position:
               
9-278
               

               
Cow position:
               
chr4:54927586-54927315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
33, 58
               

               
Conread position:
               
10-271
               

               
Cow position:
               
chr4:19699961-19700213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
29, 98
               

               
Conread position:
               
10-272
               

               
Cow position:
               
chr4:20157563-20157299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
28, 161
               

               
Conread position:
               
10-278
               

               
Cow position:
               
chr4:63965134-63964866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
32, 85
               

               
Conread position:
               
10-280
               

               
Cow position:
               
chr4:37313025-37313290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
32, 112
               

               
Conread position:
               
12-272
               

               
Cow position:
               
chr4:68387648-68387913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
29, 155
               

               
Conread position:
               
17-269
               

               
Cow position:
               
chr4:21874036-21874290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
25, 61
               

               
Conread position:
               
17-288
               

               
Cow position:
               
chr4:25537407-25537682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
25, 108
               

               
Conread position:
               
18-235
               

               
Cow position:
               
chr4:16799325-16799105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
24, 107
               

               
Conread position:
               
21-284
               

               
Cow position:
               
chr4:38952418-38952681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
18, 97
               

               
Conread position:
               
25-281
               

               
Cow position:
               
chr4:52779724-52779978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
194, 89
               

               
Conread position:
               
25-323
               

               
Cow position:
               
chr4:48396924-48396625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
17, 72
               

               
Conread position:
               
27-270
               

               
Cow position:
               
chr4:1419094-1419343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
15, 143
               

               
Conread position:
               
30-279
               

               
Cow position:
               
chr4:4085244-4084989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
59, 96
               

               
Conread position:
               
30-323
               

               
Cow position:
               
chr4:65950533-65950821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
189, 8
               

               
Conread position:
               
36-270
               

               
Cow position:
               
chr4:213902-214132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
80, 43
               

               
Conread position:
               
38-224
               

               
Cow position:
               
chr4:67466607-67466792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
181, 78
               

               
Conread position:
               
38-260
               

               
Cow position:
               
chr4:38157206-38156982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
39-307
               

               
Cow position:
               
chr4:17084455-17084190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
69, 212
               

               
Conread position:
               
40-260
               

               
Cow position:
               
chr4:13026189-13026407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
73, 117
               

               
Conread position:
               
59-278
               

               
Cow position:
               
chr4:34503198-34503419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
118, 64
               

               
Conread position:
               
60-272
               

               
Cow position:
               
chr4:60719008-60719220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
35, 9
               

               
Conread position:
               
66-323
               

               
Cow position:
               
chr4:49826166-49826419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
153, 31
               

               
Conread position:
               
76-306
               

               
Cow position:
               
chr4:10851526-10851301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
144, 10
               

               
Conread position:
               
79-275
               

               
Cow position:
               
chr4:48422801-48422996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
140, 173
               

               
Conread position:
               
81-325
               

               
Cow position:
               
chr4:19323900-19324151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
84-272
               

               
Cow position:
               
chr4:54541710-54541518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
32, 61
               

               
Conread position:
               
86-271
               

               
Cow position:
               
chr4:34509771-34509956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
132, 177
               

               
Conread position:
               
94-304
               

               
Cow position:
               
chr4:65131514-65131298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
105-272
               

               
Cow position:
               
chr4:60506226-60506390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
115, 58
               
Show alignments to all cow chromosomes.