Cow genome map
| Conread name: | Ovi1-UMC-pd3ov2-001-c12 |
| Conread position: | 1-114 |
| Cow position: | chr9:53608219-53608334 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 94 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 1-126 |
| Cow position: | chr9:1952093-1952220 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 1-131 |
| Cow position: | chr9:4928803-4928671 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 1-131 |
| Cow position: | chr9:41652961-41652832 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 41, 107 |
| Conread position: | 1-131 |
| Cow position: | chr9:60037829-60037696 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-146 |
| Cow position: | chr9:31292864-31292720 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 38, 107 |
| Conread position: | 1-163 |
| Cow position: | chr9:20810889-20811051 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 38, 74 |
| Conread position: | 1-178 |
| Cow position: | chr9:30195385-30195213 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 43, 60 |
| Conread position: | 1-196 |
| Cow position: | chr9:22361187-22360991 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 106, 43 |
| Conread position: | 1-205 |
| Cow position: | chr9:36827306-36827107 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 41, 70 |
| Conread position: | 1-205 |
| Cow position: | chr9:38344066-38343862 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 39, 158 |
| Conread position: | 1-251 |
| Cow position: | chr9:23430970-23431222 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 41, 76 |
| Conread position: | 1-254 |
| Cow position: | chr9:45285355-45285613 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 38, 24 |
| Conread position: | 1-258 |
| Cow position: | chr9:32371585-32371833 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 40, 102 |
| Conread position: | 1-260 |
| Cow position: | chr9:10118489-10118737 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 41, 107 |
| Conread position: | 1-265 |
| Cow position: | chr9:34689427-34689684 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 38, 12 |
| Conread position: | 1-268 |
| Cow position: | chr9:9552263-9551996 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 103, 33 |
| Conread position: | 1-269 |
| Cow position: | chr9:20091217-20090954 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 38, 64 |
| Conread position: | 1-269 |
| Cow position: | chr9:34957879-34958149 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 188 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 38, 71 |
| Conread position: | 1-269 |
| Cow position: | chr9:55256375-55256646 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 38, 142 |
| Conread position: | 1-270 |
| Cow position: | chr9:51620612-51620351 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 13, 20 |
| Conread position: | 1-270 |
| Cow position: | chr9:61303179-61302905 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 1-271 |
| Cow position: | chr9:3738046-3738320 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 41, 100 |
| Conread position: | 1-271 |
| Cow position: | chr9:4340994-4341255 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 38, 115 |
| Conread position: | 1-271 |
| Cow position: | chr9:17740772-17741038 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 38, 92 |
| Conread position: | 1-271 |
| Cow position: | chr9:17799803-17799538 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 41, 10 |
| Conread position: | 1-271 |
| Cow position: | chr9:23388502-23388767 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 200 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 41, 95 |
| Conread position: | 1-271 |
| Cow position: | chr9:28773297-28773043 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 200 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 40, 117 |
| Conread position: | 1-271 |
| Cow position: | chr9:45141429-45141696 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 39, 20 |
| Conread position: | 1-271 |
| Cow position: | chr9:56773255-56772980 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 38, 66 |
| Conread position: | 1-272 |
| Cow position: | chr9:6192287-6192555 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 41, 51 |
| Conread position: | 1-272 |
| Cow position: | chr9:19493287-19493561 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 43, 158 |
| Conread position: | 1-272 |
| Cow position: | chr9:44921215-44921499 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 1-273 |
| Cow position: | chr9:8546494-8546232 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 39, 60 |
| Conread position: | 1-274 |
| Cow position: | chr9:29006737-29006459 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 40, 16 |
| Conread position: | 1-275 |
| Cow position: | chr9:9403000-9403280 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 41, 135 |
| Conread position: | 1-275 |
| Cow position: | chr9:52578361-52578646 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 37, 60 |
| Conread position: | 1-277 |
| Cow position: | chr9:10144300-10144576 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 200 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 27, 165 |
| Conread position: | 1-279 |
| Cow position: | chr9:9443421-9443704 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 29, 126 |
| Conread position: | 1-280 |
| Cow position: | chr9:8563013-8562717 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 35, 199 |
| Conread position: | 1-280 |
| Cow position: | chr9:9405875-9406158 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 38, 76 |
| Conread position: | 1-280 |
| Cow position: | chr9:19067953-19067679 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 105, 43 |
| Conread position: | 1-280 |
| Cow position: | chr9:21888345-21888063 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 30, 120 |
| Conread position: | 1-281 |
| Cow position: | chr9:13169490-13169770 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 197 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 41, 19 |
| Conread position: | 1-281 |
| Cow position: | chr9:28747349-28747623 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 195 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 38, 9 |
| Conread position: | 1-281 |
| Cow position: | chr9:30124096-30123823 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 39, 86 |
| Conread position: | 1-281 |
| Cow position: | chr9:34286976-34286693 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 1-281 |
| Cow position: | chr9:41728432-41728155 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 40, 27 |
| Conread position: | 1-284 |
| Cow position: | chr9:33218776-33219056 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 41, 66 |
| Conread position: | 1-284 |
| Cow position: | chr9:61997423-61997710 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 34, 87 |
| Conread position: | 1-287 |
| Cow position: | chr9:34901940-34902215 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 197 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 124, 37 |
| Conread position: | 1-288 |
| Cow position: | chr9:24887374-24887094 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 206 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 37, 11 |
| Conread position: | 1-290 |
| Cow position: | chr9:766977-767262 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 202 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 38, 121 |
| Conread position: | 1-306 |
| Cow position: | chr9:7634449-7634132 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 1-306 |
| Cow position: | chr9:36445799-36445490 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 130, 34 |
| Conread position: | 1-306 |
| Cow position: | chr9:55084121-55084431 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 208 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 30, 126 |
| Conread position: | 1-310 |
| Cow position: | chr9:4267808-4268113 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 38, 96 |
| Conread position: | 1-314 |
| Cow position: | chr9:11319458-11319770 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 213 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 38, 94 |
| Conread position: | 1-316 |
| Cow position: | chr9:33119710-33120026 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 124 |
| Conread position: | 1-316 |
| Cow position: | chr9:54528687-54528377 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 213 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 36, 22 |
| Conread position: | 1-322 |
| Cow position: | chr9:9654136-9654450 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 229 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 38, 141 |
| Conread position: | 1-340 |
| Cow position: | chr9:64091860-64091514 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 231 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 39, 280 |
| Conread position: | 2-128 |
| Cow position: | chr9:31638466-31638594 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 34, 117 |
| Conread position: | 2-139 |
| Cow position: | chr9:8998531-8998392 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 38, 134 |
| Conread position: | 2-151 |
| Cow position: | chr9:18002774-18002928 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 2-154 |
| Cow position: | chr9:4323983-4324134 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 37, 116 |
| Conread position: | 2-155 |
| Cow position: | chr9:34666593-34666442 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 37, 65 |
| Conread position: | 2-163 |
| Cow position: | chr9:1712302-1712462 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 38, 85 |
| Conread position: | 2-252 |
| Cow position: | chr9:50606774-50607021 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 179 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 40, 115 |
| Conread position: | 2-259 |
| Cow position: | chr9:28354693-28354434 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 29, 75 |
| Conread position: | 2-260 |
| Cow position: | chr9:13205393-13205650 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 34, 63 |
| Conread position: | 2-260 |
| Cow position: | chr9:18381034-18380781 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 32, 53 |
| Conread position: | 2-260 |
| Cow position: | chr9:29184958-29185221 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 2-260 |
| Cow position: | chr9:43871154-43870891 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 28, 143 |
| Conread position: | 2-267 |
| Cow position: | chr9:5226993-5227265 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 34, 144 |
| Conread position: | 2-269 |
| Cow position: | chr9:5501032-5500758 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 197 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 40, 166 |
| Conread position: | 2-270 |
| Cow position: | chr9:26403960-26403691 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 35, 117 |
| Conread position: | 2-271 |
| Cow position: | chr9:19555549-19555280 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 94 |
| Conread position: | 2-271 |
| Cow position: | chr9:31078910-31079175 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 201 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 40, 18 |
| Conread position: | 2-271 |
| Cow position: | chr9:50080871-50081134 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 29, 107 |
| Conread position: | 2-272 |
| Cow position: | chr9:11168905-11168632 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 35, 116 |
| Conread position: | 2-280 |
| Cow position: | chr9:8901049-8901327 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 35, 16 |
| Conread position: | 2-280 |
| Cow position: | chr9:34374757-34375029 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 37, 56 |
| Conread position: | 2-280 |
| Cow position: | chr9:36490717-36491006 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 2-281 |
| Cow position: | chr9:28726546-28726834 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 40, 272 |
| Conread position: | 2-293 |
| Cow position: | chr9:33598156-33597865 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 197 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 35, 106 |
| Conread position: | 2-299 |
| Cow position: | chr9:1938304-1937999 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 206 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 187, 75 |
| Conread position: | 2-303 |
| Cow position: | chr9:50543249-50543552 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 38, 25 |
| Conread position: | 2-306 |
| Cow position: | chr9:3782535-3782240 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 209 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 35, 94 |
| Conread position: | 2-306 |
| Cow position: | chr9:5763459-5763760 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 221 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 37, 64 |
| Conread position: | 2-314 |
| Cow position: | chr9:33940782-33940480 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 33, 119 |
| Conread position: | 2-322 |
| Cow position: | chr9:6840182-6839847 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 20, 232 |
| Conread position: | 2-323 |
| Cow position: | chr9:1973117-1972802 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 213 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 32, 117 |
| Conread position: | 3-131 |
| Cow position: | chr9:32829835-32829964 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 32, 67 |
| Conread position: | 3-253 |
| Cow position: | chr9:44914914-44915173 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 35, 93 |
| Conread position: | 3-253 |
| Cow position: | chr9:46316612-46316858 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 38, 59 |
| Conread position: | 3-254 |
| Cow position: | chr9:41679919-41679667 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 35, 117 |
| Conread position: | 3-254 |
| Cow position: | chr9:60027371-60027119 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 185 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 152, 39 |
| Conread position: | 3-268 |
| Cow position: | chr9:5433812-5433541 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 32, 159 |
| Conread position: | 3-268 |
| Cow position: | chr9:25557139-25556879 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 36, 63 |
| Conread position: | 3-271 |
| Cow position: | chr9:21459984-21460247 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 190 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 120, 34 |
| Conread position: | 3-271 |
| Cow position: | chr9:42445805-42446078 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 3-271 |
| Cow position: | chr9:57896946-57897204 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 40, 31 |
| Conread position: | 3-272 |
| Cow position: | chr9:48628201-48627931 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 198 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 39, 58 |
| Conread position: | 3-275 |
| Cow position: | chr9:9199610-9199881 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 67, 41 |
| Conread position: | 3-280 |
| Cow position: | chr9:20416341-20416612 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 216, 41 |
| Conread position: | 3-288 |
| Cow position: | chr9:44831881-44832162 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 204 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 36, 74 |
| Conread position: | 3-299 |
| Cow position: | chr9:5509895-5509604 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 36, 79 |
| Conread position: | 3-324 |
| Cow position: | chr9:9595781-9596104 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 38, 104 |
| Conread position: | 4-129 |
| Cow position: | chr9:49403926-49403807 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 105 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 38, 67 |
| Conread position: | 4-262 |
| Cow position: | chr9:28983352-28983096 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 215, 33 |
| Conread position: | 4-265 |
| Cow position: | chr9:51204893-51204636 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 38, 73 |
| Conread position: | 4-279 |
| Cow position: | chr9:30477608-30477877 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 185 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 27, 82 |
| Conread position: | 5-214 |
| Cow position: | chr9:22151913-22152122 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 35, 15 |
| Conread position: | 5-269 |
| Cow position: | chr9:20848103-20847842 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 202 |
| Conread position: | 5-280 |
| Cow position: | chr9:12910230-12910504 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 37, 112 |
| Conread position: | 5-281 |
| Cow position: | chr9:60394879-60395154 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 37, 110 |
| Conread position: | 7-260 |
| Cow position: | chr9:51720732-51720981 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 30, 112 |
| Conread position: | 8-271 |
| Cow position: | chr9:5263669-5263405 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 187 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 36, 45 |
| Conread position: | 8-272 |
| Cow position: | chr9:17871935-17872205 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 27, 263 |
| Conread position: | 8-284 |
| Cow position: | chr9:24997352-24997624 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 184 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 27, 109 |
| Conread position: | 9-112 |
| Cow position: | chr9:8525004-8524897 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 9-113 |
| Cow position: | chr9:22227915-22228021 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 87 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 9-260 |
| Cow position: | chr9:62357361-62357612 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 32, 133 |
| Conread position: | 9-288 |
| Cow position: | chr9:26279009-26279283 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 210, 28 |
| Conread position: | 9-307 |
| Cow position: | chr9:11313342-11313643 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 22, 107 |
| Conread position: | 9-314 |
| Cow position: | chr9:17310387-17310701 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 22, 184 |
| Conread position: | 10-257 |
| Cow position: | chr9:11299524-11299761 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 31, 107 |
| Conread position: | 10-299 |
| Cow position: | chr9:29825203-29824912 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 204 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 24, 180 |
| Conread position: | 12-258 |
| Cow position: | chr9:49292981-49293225 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 92 |
| Conread position: | 13-280 |
| Cow position: | chr9:18342888-18342626 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 208, 31 |
| Conread position: | 17-258 |
| Cow position: | chr9:26344809-26345051 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 25, 35 |
| Conread position: | 17-260 |
| Cow position: | chr9:5219009-5219256 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 25, 101 |
| Conread position: | 17-324 |
| Cow position: | chr9:39011317-39011621 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 218 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 25, 57 |
| Conread position: | 21-271 |
| Cow position: | chr9:43757693-43757444 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 18, 61 |
| Conread position: | 21-282 |
| Cow position: | chr9:33114501-33114241 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 18, 79 |
| Conread position: | 27-272 |
| Cow position: | chr9:7953049-7952805 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 15, 44 |
| Conread position: | 30-272 |
| Cow position: | chr9:41283157-41282918 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 136, 9 |
| Conread position: | 30-306 |
| Cow position: | chr9:17411048-17411321 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 175, 13 |
| Conread position: | 34-272 |
| Cow position: | chr9:21080704-21080466 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 20, 83 |
| Conread position: | 36-271 |
| Cow position: | chr9:53109394-53109152 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 11, 150 |
| Conread position: | 36-280 |
| Cow position: | chr9:40005614-40005372 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 89, 76 |
| Conread position: | 38-242 |
| Cow position: | chr9:41486104-41486308 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 38-269 |
| Cow position: | chr9:6596098-6596322 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 38-271 |
| Cow position: | chr9:6189235-6189461 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 181, 78 |
| Conread position: | 38-299 |
| Cow position: | chr9:52839750-52840008 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 170, 78 |
| Conread position: | 41-272 |
| Cow position: | chr9:8636803-8636571 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 39, 70 |
| Conread position: | 54-266 |
| Cow position: | chr9:20465841-20466050 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 165, 8 |
| Conread position: | 54-278 |
| Cow position: | chr9:33584562-33584788 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 60, 87 |
| Conread position: | 64-262 |
| Cow position: | chr9:28754930-28754733 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 155, 183 |
| Conread position: | 66-306 |
| Cow position: | chr9:32981963-32982199 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 111, 55 |
| Conread position: | 76-254 |
| Cow position: | chr9:29194924-29195102 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 143, 18 |
| Conread position: | 79-288 |
| Cow position: | chr9:17840579-17840790 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 44, 178 |
| Conread position: | 81-275 |
| Cow position: | chr9:8628822-8629017 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 138, 102 |
| Conread position: | 85-280 |
| Cow position: | chr9:9686324-9686517 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 134, 37 |
| Conread position: | 86-281 |
| Cow position: | chr9:37199212-37199022 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 134, 22 |
| Conread position: | 86-296 |
| Cow position: | chr9:53750866-53751076 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 59, 34 |
| Conread position: | 87-281 |
| Cow position: | chr9:34024789-34024594 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 132, 0 |
Show alignments to all cow chromosomes.