Cow genome map

Conread name: Ovi1-UMC-pd3ov2-001-c12

Conread position: 1-112
Cow position: chrX:35388022-35387909 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 1-130
Cow position: chrX:29509564-29509429 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 1-131
Cow position: chrX:20582909-20583032 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 108
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 41, 9

Conread position: 1-146
Cow position: chrX:34441572-34441424 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 30, 142

Conread position: 1-163
Cow position: chrX:34990915-34991078 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 38, 76

Conread position: 1-221
Cow position: chrX:13912959-13913175 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 156
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 113, 40

Conread position: 1-246
Cow position: chrX:7571784-7572032 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 175
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 41, 33

Conread position: 1-251
Cow position: chrX:35273236-35273495 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 188
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 40, 60

Conread position: 1-260
Cow position: chrX:33493658-33493916 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 183

Conread position: 1-260
Cow position: chrX:38066570-38066314 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 190
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 39, 66

Conread position: 1-260
Cow position: chrX:45110539-45110796 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 171
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 35, 18

Conread position: 1-261
Cow position: chrX:19273843-19273566 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 194
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 10, 0

Conread position: 1-263
Cow position: chrX:37232293-37232550 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 185
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 39, 112

Conread position: 1-268
Cow position: chrX:678684-678426 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 189
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 41, 19

Conread position: 1-268
Cow position: chrX:20584204-20584473 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 195
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 41, 260

Conread position: 1-269
Cow position: chrX:6413924-6414191 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 190
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 28, 109

Conread position: 1-269
Cow position: chrX:8869522-8869251 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 196
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 61, 55

Conread position: 1-269
Cow position: chrX:9201430-9201696 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 193
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 38, 117

Conread position: 1-269
Cow position: chrX:13647905-13647637 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 189
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 40, 86

Conread position: 1-269
Cow position: chrX:45502032-45502294 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 189
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 35, 52

Conread position: 1-271
Cow position: chrX:7721869-7722140 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 185
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 39, 160

Conread position: 1-271
Cow position: chrX:23091761-23092021 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 191
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 103, 38

Conread position: 1-271
Cow position: chrX:31436358-31436626 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 194
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 41, 79

Conread position: 1-272
Cow position: chrX:5118622-5118346 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 201
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 38, 86

Conread position: 1-272
Cow position: chrX:6544136-6544407 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 201
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 38, 80

Conread position: 1-272
Cow position: chrX:21986412-21986139 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 159

Conread position: 1-272
Cow position: chrX:22074680-22074953 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 205
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 39, 75

Conread position: 1-272
Cow position: chrX:27432034-27431765 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 197
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 41, 107

Conread position: 1-272
Cow position: chrX:29542339-29542072 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 123

Conread position: 1-272
Cow position: chrX:35542775-35543040 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 190
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 41, 117

Conread position: 1-272
Cow position: chrX:38549332-38549600 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 187
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 163, 36

Conread position: 1-275
Cow position: chrX:34792427-34792157 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 193
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 41, 8

Conread position: 1-275
Cow position: chrX:41870953-41871222 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 195
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 39, 64

Conread position: 1-278
Cow position: chrX:34313913-34314183 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 201
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 41, 15

Conread position: 1-278
Cow position: chrX:34505167-34504891 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 197
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 38, 66

Conread position: 1-278
Cow position: chrX:45414420-45414148 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 185
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 38, 117

Conread position: 1-280
Cow position: chrX:5017534-5017262 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 197
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 39, 131

Conread position: 1-280
Cow position: chrX:26881688-26881405 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 268

Conread position: 1-281
Cow position: chrX:12979947-12979672 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 199
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 37, 75

Conread position: 1-281
Cow position: chrX:40685451-40685166 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 200
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 37, 0

Conread position: 1-282
Cow position: chrX:31252298-31252570 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 203
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 41, 116

Conread position: 1-282
Cow position: chrX:42171416-42171137 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 196
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 41, 123

Conread position: 1-288
Cow position: chrX:14884078-14883788 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 199
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 38, 163

Conread position: 1-290
Cow position: chrX:38853078-38853370 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 79

Conread position: 1-296
Cow position: chrX:9416813-9416510 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 201
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 40, 228

Conread position: 1-303
Cow position: chrX:616382-616077 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 287

Conread position: 1-303
Cow position: chrX:40557801-40557496 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 1-305
Cow position: chrX:29680380-29680078 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 201
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 41, 116

Conread position: 1-306
Cow position: chrX:36067897-36068201 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 20

Conread position: 1-308
Cow position: chrX:41884534-41884226 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 266

Conread position: 1-309
Cow position: chrX:23562515-23562818 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 202
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 39, 82

Conread position: 1-310
Cow position: chrX:31311909-31312219 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 76

Conread position: 1-320
Cow position: chrX:13177585-13177276 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 226
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 38, 65

Conread position: 2-111
Cow position: chrX:4750423-4750312 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 2-128
Cow position: chrX:31256747-31256874 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 38, 106

Conread position: 2-154
Cow position: chrX:41743792-41743947 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 35, 123

Conread position: 2-154
Cow position: chrX:42994497-42994646 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 54

Conread position: 2-254
Cow position: chrX:35224177-35224431 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 170
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 12, 20

Conread position: 2-259
Cow position: chrX:11633559-11633821 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 172
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 29, 0

Conread position: 2-260
Cow position: chrX:41027038-41027299 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 177
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 29, 126

Conread position: 2-268
Cow position: chrX:1499546-1499816 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 190
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 33, 77

Conread position: 2-268
Cow position: chrX:7161941-7162203 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 179
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 37, 92

Conread position: 2-270
Cow position: chrX:31442941-31442679 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 186
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 29, 71

Conread position: 2-271
Cow position: chrX:22387362-22387098 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 181
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 34, 113

Conread position: 2-272
Cow position: chrX:23514134-23513869 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 192
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 116

Conread position: 2-272
Cow position: chrX:27228004-27228276 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 187
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 122

Conread position: 2-277
Cow position: chrX:42470060-42469784 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 195
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 40, 73

Conread position: 2-280
Cow position: chrX:7695629-7695909 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 209
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 35, 82

Conread position: 2-280
Cow position: chrX:11085176-11084906 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 188
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 33, 94

Conread position: 2-280
Cow position: chrX:34502803-34503079 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 189
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 40, 116

Conread position: 2-280
Cow position: chrX:43115032-43115309 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 205
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 18, 95

Conread position: 2-281
Cow position: chrX:10412104-10411823 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 188
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 37, 59

Conread position: 2-281
Cow position: chrX:31729324-31729600 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 187
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 103

Conread position: 2-281
Cow position: chrX:34532402-34532681 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 85

Conread position: 2-282
Cow position: chrX:38006883-38006607 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 198
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 40, 111

Conread position: 2-283
Cow position: chrX:44396900-44397170 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 200
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 37, 115

Conread position: 2-306
Cow position: chrX:5872198-5872493 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 208
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 36, 89

Conread position: 2-306
Cow position: chrX:9365794-9365490 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 209
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 40, 97

Conread position: 2-307
Cow position: chrX:8797132-8797430 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 220
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 10, 167

Conread position: 2-314
Cow position: chrX:27772080-27771778 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 204
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 37, 93

Conread position: 2-324
Cow position: chrX:15007269-15006947 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 204
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 35, 116

Conread position: 3-128
Cow position: chrX:17497967-17498092 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 37, 92

Conread position: 3-189
Cow position: chrX:26876001-26875813 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 37, 0

Conread position: 3-196
Cow position: chrX:13785481-13785288 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 37, 183

Conread position: 3-221
Cow position: chrX:27680281-27680498 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 152
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 37, 51

Conread position: 3-233
Cow position: chrX:7509024-7509252 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 172
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 39, 121

Conread position: 3-253
Cow position: chrX:11939045-11938801 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 185
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 35, 73

Conread position: 3-262
Cow position: chrX:34315407-34315663 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 178
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 101, 35

Conread position: 3-263
Cow position: chrX:8925583-8925843 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 183
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 37, 111

Conread position: 3-263
Cow position: chrX:29120928-29121190 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 177
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 32, 115

Conread position: 3-270
Cow position: chrX:30543405-30543134 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 180
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 32, 110

Conread position: 3-271
Cow position: chrX:34401880-34402156 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 203
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 39, 141

Conread position: 3-277
Cow position: chrX:38963987-38964266 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 196
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 37, 24

Conread position: 3-279
Cow position: chrX:29601948-29601666 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 192
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 37, 0

Conread position: 3-280
Cow position: chrX:619122-618849 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 204
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 39, 122

Conread position: 3-280
Cow position: chrX:4043970-4043706 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 185
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 216, 57

Conread position: 3-280
Cow position: chrX:8730968-8731250 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 185
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 37, 199

Conread position: 3-280
Cow position: chrX:9635299-9635029 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 188
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 216, 41

Conread position: 3-280
Cow position: chrX:13382211-13382486 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 203
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 31, 122

Conread position: 3-280
Cow position: chrX:34192555-34192819 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 200
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 36, 64

Conread position: 3-280
Cow position: chrX:42247303-42247021 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 192
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 32, 122

Conread position: 3-281
Cow position: chrX:17794867-17795143 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 192
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 39, 17

Conread position: 3-299
Cow position: chrX:40269370-40269671 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 210
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 36, 264

Conread position: 3-301
Cow position: chrX:37781229-37780928 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 213
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 42, 262

Conread position: 3-302
Cow position: chrX:27394137-27393846 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 200
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 36, 78

Conread position: 3-306
Cow position: chrX:17725856-17726162 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 120

Conread position: 4-154
Cow position: chrX:38439361-38439514 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 36, 0

Conread position: 4-170
Cow position: chrX:19015321-19015486 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 38, 78

Conread position: 4-260
Cow position: chrX:1503221-1503467 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 176
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 27, 73

Conread position: 4-271
Cow position: chrX:11655975-11656233 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 195
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 37, 115

Conread position: 4-272
Cow position: chrX:5919379-5919648 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 184
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 38, 66

Conread position: 4-279
Cow position: chrX:45976803-45977086 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 191
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 28, 0

Conread position: 4-282
Cow position: chrX:34411727-34412007 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 202
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 38, 17

Conread position: 4-284
Cow position: chrX:21672438-21672726 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 196
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 28, 131

Conread position: 5-260
Cow position: chrX:37986117-37986365 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 181
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 35, 53

Conread position: 5-263
Cow position: chrX:37119479-37119736 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 171
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 30, 160

Conread position: 5-270
Cow position: chrX:46291023-46291295 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 198
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 36, 14

Conread position: 5-271
Cow position: chrX:14275850-14275593 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 183
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 108, 39

Conread position: 5-274
Cow position: chrX:40035558-40035285 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 99

Conread position: 6-253
Cow position: chrX:29229894-29230132 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 186
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 8, 99

Conread position: 7-272
Cow position: chrX:9651139-9650871 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 189
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 33, 75

Conread position: 7-272
Cow position: chrX:34376833-34377095 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 187
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 35, 54

Conread position: 7-272
Cow position: chrX:38654544-38654288 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 184
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 24, 43

Conread position: 8-128
Cow position: chrX:23497781-23497660 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 34, 115

Conread position: 8-259
Cow position: chrX:30338055-30337819 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 175
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 211, 35

Conread position: 8-260
Cow position: chrX:48014328-48014575 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 168
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 212, 27

Conread position: 8-268
Cow position: chrX:33539052-33539317 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 189
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 32, 113

Conread position: 8-270
Cow position: chrX:33855346-33855069 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 191
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 34, 213

Conread position: 8-270
Cow position: chrX:34565170-34565433 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 171
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 96, 193

Conread position: 8-271
Cow position: chrX:45113504-45113772 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 184
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 29, 102

Conread position: 8-280
Cow position: chrX:18695036-18694771 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 187
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 27, 86

Conread position: 8-288
Cow position: chrX:45845986-45846271 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 195
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 33, 152

Conread position: 8-306
Cow position: chrX:42927932-42927639 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 207
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 33, 100

Conread position: 9-253
Cow position: chrX:39558462-39558216 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 164
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 31, 203

Conread position: 9-275
Cow position: chrX:45430128-45429867 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 189
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 31, 71

Conread position: 9-281
Cow position: chrX:41526633-41526369 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 192
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 32, 78

Conread position: 9-310
Cow position: chrX:44961636-44961944 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 196
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 214

Conread position: 9-323
Cow position: chrX:42235640-42235322 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 208
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 31, 188

Conread position: 10-262
Cow position: chrX:43567811-43568060 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 173
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 29, 108

Conread position: 10-272
Cow position: chrX:11614588-11614845 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 175
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 27, 109

Conread position: 13-251
Cow position: chrX:37574743-37574971 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 167
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 26, 48

Conread position: 14-305
Cow position: chrX:43730325-43730039 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 197
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 26, 71

Conread position: 17-275
Cow position: chrX:33000799-33001061 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 178
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 18, 101

Conread position: 21-301
Cow position: chrX:16348670-16348392 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 195
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 12, 141

Conread position: 24-260
Cow position: chrX:9252256-9252023 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 166
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 195, 10

Conread position: 29-271
Cow position: chrX:1466069-1466315 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 183
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 10, 95

Conread position: 30-271
Cow position: chrX:29050156-29050400 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 175
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 10, 137

Conread position: 30-272
Cow position: chrX:918816-918564 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 177
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 133, 176

Conread position: 30-282
Cow position: chrX:43527421-43527668 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 169
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 123, 86

Conread position: 38-268
Cow position: chrX:41192627-41192853 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 164
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 70, 36

Conread position: 38-280
Cow position: chrX:5135606-5135359 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 171
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 173, 215

Conread position: 40-329
Cow position: chrX:22115396-22115109 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 198
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 12, 76

Conread position: 41-268
Cow position: chrX:4153113-4152882 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 171
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 73, 127

Conread position: 41-272
Cow position: chrX:4515606-4515844 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 161
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 130, 75

Conread position: 57-261
Cow position: chrX:46429883-46429678 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 151
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 10, 20

Conread position: 62-277
Cow position: chrX:12437327-12437114 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 157
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 158, 58

Conread position: 65-279
Cow position: chrX:35985764-35985977 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 151
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 154, 107

Conread position: 70-278
Cow position: chrX:22393035-22392826 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 143
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 149, 175

Conread position: 76-272
Cow position: chrX:11326143-11325946 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 140
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 54, 153

Conread position: 76-281
Cow position: chrX:6599827-6599620 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 148
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 101, 89

Conread position: 77-263
Cow position: chrX:27306410-27306597 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 142, 0

Conread position: 78-281
Cow position: chrX:19394511-19394718 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 148
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 141, 41

Conread position: 79-279
Cow position: chrX:24749047-24749246 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 140, 36

Show alignments to all cow chromosomes.