Cow genome map
| Conread name: | Ovi1-UMC-pd3ov3-006-e05 |
| Conread position: | 1-231 |
| Cow position: | chr19:30756471-30756228 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 1-268 |
| Cow position: | chr19:7343320-7343046 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 197 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-268 |
| Cow position: | chr19:43144965-43144690 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 38, 165 |
| Conread position: | 1-310 |
| Cow position: | chr19:39551-39230 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 30, 166 |
| Conread position: | 1-312 |
| Cow position: | chr19:1656680-1656347 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 1-312 |
| Cow position: | chr19:5730123-5729803 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 173 |
| Conread position: | 1-316 |
| Cow position: | chr19:20105978-20105651 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 38, 166 |
| Conread position: | 1-323 |
| Cow position: | chr19:205238-204900 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 240 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 42, 315 |
| Conread position: | 1-323 |
| Cow position: | chr19:33874678-33874345 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 1-323 |
| Cow position: | chr19:39184289-39184619 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 40 |
| Conread position: | 1-323 |
| Cow position: | chr19:40851197-40851530 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 210 |
| Conread position: | 1-335 |
| Cow position: | chr19:3139185-3138839 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 295 |
| Conread position: | 1-336 |
| Cow position: | chr19:438188-438531 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 40 |
| Conread position: | 1-336 |
| Cow position: | chr19:11521915-11522258 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 245 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 46, 96 |
| Conread position: | 1-337 |
| Cow position: | chr19:135539-135888 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 247 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 38, 60 |
| Conread position: | 1-337 |
| Cow position: | chr19:4386866-4386528 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 120 |
| Conread position: | 2-133 |
| Cow position: | chr19:40816261-40816394 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 2-322 |
| Cow position: | chr19:773852-773518 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 37, 167 |
| Conread position: | 8-323 |
| Cow position: | chr19:7489597-7489264 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 16-249 |
| Cow position: | chr19:892385-892626 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 16-321 |
| Cow position: | chr19:35384376-35384688 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 32, 183 |
| Conread position: | 16-323 |
| Cow position: | chr19:12774352-12774037 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 16-323 |
| Cow position: | chr19:33942848-33942524 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 229 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 17-316 |
| Cow position: | chr19:28594788-28594477 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 219 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 17-323 |
| Cow position: | chr19:39391745-39391428 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 27-323 |
| Cow position: | chr19:28580436-28580739 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 219 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 21, 163 |
| Conread position: | 39-322 |
| Cow position: | chr19:5027859-5028151 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 196 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 90, 22 |
| Conread position: | 51-287 |
| Cow position: | chr19:39096349-39096109 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 78, 178 |
| Conread position: | 62-269 |
| Cow position: | chr19:35379772-35379568 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 91, 59 |
| Conread position: | 79-320 |
| Cow position: | chr19:27051347-27051589 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 10, 60 |
| Conread position: | 79-326 |
| Cow position: | chr19:347155-347411 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 29, 151 |
| Conread position: | 95-336 |
| Cow position: | chr19:1588059-1588306 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 187 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 60, 167 |
| Conread position: | 105-311 |
| Cow position: | chr19:9706992-9707203 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 50, 16 |
| Conread position: | 109-317 |
| Cow position: | chr19:40886602-40886820 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 34, 76 |
| Conread position: | 137-317 |
| Cow position: | chr19:39667635-39667815 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 32, 104 |
Show alignments to all cow chromosomes.