Cow genome map
| Conread name: | Ovi1-UMC-pd3ov3-006-e05 |
| Conread position: | 1-268 |
| Cow position: | chr23:2312087-2312361 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 38, 166 |
| Conread position: | 1-269 |
| Cow position: | chr23:15876416-15876681 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 48, 80 |
| Conread position: | 1-289 |
| Cow position: | chr23:13512260-13511964 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 14 |
| Conread position: | 1-316 |
| Cow position: | chr23:3707278-3706948 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 25, 168 |
| Conread position: | 1-323 |
| Cow position: | chr23:965340-965675 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 1-323 |
| Cow position: | chr23:15526720-15526389 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 73 |
| Conread position: | 1-323 |
| Cow position: | chr23:20155060-20155398 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 47, 33 |
| Conread position: | 1-326 |
| Cow position: | chr23:8287185-8286848 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 122 |
| Conread position: | 1-326 |
| Cow position: | chr23:23171654-23171317 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 236 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 38, 166 |
| Conread position: | 1-331 |
| Cow position: | chr23:29402567-29402908 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 236 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-335 |
| Cow position: | chr23:1401386-1401717 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 21 |
| Conread position: | 1-336 |
| Cow position: | chr23:16498087-16498422 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 14 |
| Conread position: | 1-336 |
| Cow position: | chr23:22146158-22146489 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 234 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 39, 141 |
| Conread position: | 1-337 |
| Cow position: | chr23:2759043-2758693 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 1-337 |
| Cow position: | chr23:3879932-3880276 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 210 |
| Conread position: | 1-337 |
| Cow position: | chr23:4818175-4817827 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 220 |
| Conread position: | 1-337 |
| Cow position: | chr23:4889839-4889489 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 120 |
| Conread position: | 1-337 |
| Cow position: | chr23:5873423-5873773 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 202 |
| Conread position: | 1-337 |
| Cow position: | chr23:16614284-16614630 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 78 |
| Conread position: | 2-320 |
| Cow position: | chr23:2342227-2341900 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 222 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 124, 57 |
| Conread position: | 2-326 |
| Cow position: | chr23:29451200-29451523 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 123 |
| Conread position: | 3-337 |
| Cow position: | chr23:948654-948985 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 229 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 36, 74 |
| Conread position: | 4-179 |
| Cow position: | chr23:21243589-21243776 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 16-260 |
| Cow position: | chr23:2794117-2794368 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 185 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 16-320 |
| Cow position: | chr23:6220391-6220076 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 216 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 28, 211 |
| Conread position: | 16-323 |
| Cow position: | chr23:2025942-2026258 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 16-330 |
| Cow position: | chr23:27400660-27400320 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 241 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 25, 309 |
| Conread position: | 16-336 |
| Cow position: | chr23:2576566-2576234 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 325 |
| Conread position: | 17-323 |
| Cow position: | chr23:1957028-1956723 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 106, 14 |
| Conread position: | 17-337 |
| Cow position: | chr23:2717529-2717199 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 13, 58 |
| Conread position: | 52-337 |
| Cow position: | chr23:25682843-25683128 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 213 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 77, 12 |
| Conread position: | 54-223 |
| Cow position: | chr23:31648942-31649115 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 75, 159 |
| Conread position: | 92-313 |
| Cow position: | chr23:1012730-1012961 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 43, 133 |
| Conread position: | 161-337 |
| Cow position: | chr23:7337110-7336932 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 146 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 8, 0 |
Show alignments to all cow chromosomes.