Cow genome map
Conread name: | Ovi1-UMC-pd3ov3-006-e05 |
Conread position: | 1-196 |
Cow position: | chr9:1995337-1995540 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 142 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 1-238 |
Cow position: | chr9:30827790-30827544 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 170 |
Alignm E-value: | 9e-26 |
Alignm gaps (pig, cow): | 38, 166 |
Conread position: | 1-268 |
Cow position: | chr9:25034657-25034932 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 202 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 38, 116 |
Conread position: | 1-285 |
Cow position: | chr9:50698356-50698064 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 0 |
Conread position: | 1-305 |
Cow position: | chr9:3804605-3804282 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 238 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 62 |
Conread position: | 1-308 |
Cow position: | chr9:3167982-3167673 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 207 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 47, 146 |
Conread position: | 1-310 |
Cow position: | chr9:5515473-5515154 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 299 |
Conread position: | 1-312 |
Cow position: | chr9:10937648-10937327 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 1-316 |
Cow position: | chr9:17063329-17063662 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 236 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 38, 75 |
Conread position: | 1-316 |
Cow position: | chr9:28440862-28440535 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 229 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 38, 166 |
Conread position: | 1-316 |
Cow position: | chr9:28679025-28678697 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 227 |
Alignm E-value: | 4.99997e-41 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 1-316 |
Cow position: | chr9:45874391-45874061 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 221 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 1-316 |
Cow position: | chr9:51211734-51211407 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 166 |
Conread position: | 1-321 |
Cow position: | chr9:32970000-32969672 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 0 |
Conread position: | 1-323 |
Cow position: | chr9:6250352-6250020 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 232 |
Conread position: | 1-323 |
Cow position: | chr9:18508769-18509093 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 237 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 44, 129 |
Conread position: | 1-323 |
Cow position: | chr9:22654629-22654292 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 0 |
Conread position: | 1-323 |
Cow position: | chr9:28022859-28022524 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 193 |
Conread position: | 1-323 |
Cow position: | chr9:29027158-29027488 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 307 |
Conread position: | 1-323 |
Cow position: | chr9:30673428-30673086 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 244 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 1-323 |
Cow position: | chr9:47003239-47002913 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 229 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 134, 43 |
Conread position: | 1-323 |
Cow position: | chr9:59481743-59482073 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 158 |
Conread position: | 1-328 |
Cow position: | chr9:21410350-21410008 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 0 |
Conread position: | 1-331 |
Cow position: | chr9:25188153-25187820 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 158 |
Conread position: | 1-331 |
Cow position: | chr9:51181124-51181474 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 248 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 42, 318 |
Conread position: | 1-334 |
Cow position: | chr9:31808630-31808285 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 220 |
Conread position: | 1-336 |
Cow position: | chr9:1981326-1980980 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 84 |
Conread position: | 1-337 |
Cow position: | chr9:10322856-10322509 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 240 |
Alignm E-value: | 7.00649e-44 |
Alignm gaps (pig, cow): | 47, 196 |
Conread position: | 1-337 |
Cow position: | chr9:17304923-17305272 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 1-337 |
Cow position: | chr9:22432326-22431982 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 125, 47 |
Conread position: | 1-337 |
Cow position: | chr9:34722961-34722611 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 21 |
Conread position: | 2-303 |
Cow position: | chr9:44819200-44818899 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 225 |
Conread position: | 3-268 |
Cow position: | chr9:25903560-25903291 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 189 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 16, 114 |
Conread position: | 3-332 |
Cow position: | chr9:35315829-35316154 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 238 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 118 |
Conread position: | 8-316 |
Cow position: | chr9:4942761-4943084 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 231 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 31, 115 |
Conread position: | 15-268 |
Cow position: | chr9:9014137-9013874 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 195 |
Alignm E-value: | 7.00649e-44 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 15-323 |
Cow position: | chr9:37161774-37162093 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 16-269 |
Cow position: | chr9:30435610-30435348 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 183 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 27, 98 |
Conread position: | 16-323 |
Cow position: | chr9:60276977-60277295 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 16-325 |
Cow position: | chr9:5005010-5004692 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 57 |
Conread position: | 16-331 |
Cow position: | chr9:59537136-59536808 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 232 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 17-238 |
Cow position: | chr9:5141749-5141528 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 161 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 73, 56 |
Conread position: | 17-330 |
Cow position: | chr9:64015604-64015929 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 224 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 22, 150 |
Conread position: | 17-337 |
Cow position: | chr9:650994-651309 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 140, 31 |
Conread position: | 22-302 |
Cow position: | chr9:26102071-26102350 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 208 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 107, 26 |
Conread position: | 22-310 |
Cow position: | chr9:8165848-8166149 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 225 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 23-326 |
Cow position: | chr9:13474757-13475069 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 230 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 89, 61 |
Conread position: | 28-337 |
Cow position: | chr9:26083520-26083820 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 221 |
Alignm E-value: | 8e-35 |
Alignm gaps (pig, cow): | 74, 44 |
Conread position: | 32-268 |
Cow position: | chr9:16629648-16629889 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 176 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 97, 133 |
Conread position: | 41-266 |
Cow position: | chr9:779798-780027 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 157 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 88, 124 |
Conread position: | 42-323 |
Cow position: | chr9:4533499-4533215 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 87, 132 |
Conread position: | 52-323 |
Cow position: | chr9:3543862-3543581 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 198 |
Alignm E-value: | 6e-32 |
Alignm gaps (pig, cow): | 77, 250 |
Conread position: | 53-336 |
Cow position: | chr9:43664793-43664510 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 223 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 62 |
Conread position: | 128-323 |
Cow position: | chr9:64120138-64119943 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 148 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 26, 99 |
Conread position: | 160-323 |
Cow position: | chr9:42569792-42569623 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 132 |
Alignm E-value: | 6e-32 |
Alignm gaps (pig, cow): | 9, 0 |
Show alignments to all cow chromosomes.