Cow genome map

Conread name: Ovi1-UMC-pd3ov4-002-c04

Conread position: 1-328
Cow position: chr1:29035866-29036204 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 290

Conread position: 1-328
Cow position: chr1:72985036-72985355 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 51

Conread position: 1-330
Cow position: chr1:76095501-76095185 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 227
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 130, 74

Conread position: 1-330
Cow position: chr1:76702742-76702430 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 228
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 14, 62

Conread position: 2-327
Cow position: chr1:86594927-86594627 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 239
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 247, 75

Conread position: 2-328
Cow position: chr1:102323255-102322936 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 236
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 73, 92

Conread position: 3-328
Cow position: chr1:89494647-89494324 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 147

Conread position: 4-271
Cow position: chr1:18240657-18240366 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 213
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 52, 201

Conread position: 4-326
Cow position: chr1:76741665-76741347 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 228
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 22, 130

Conread position: 5-328
Cow position: chr1:56165106-56165428 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 227
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 63, 221

Conread position: 21-326
Cow position: chr1:57745795-57745493 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 211
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 20, 215

Conread position: 21-332
Cow position: chr1:71740543-71740234 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 208
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 15, 163

Conread position: 32-248
Cow position: chr1:53563612-53563825 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 153
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 12, 89

Conread position: 35-328
Cow position: chr1:3933641-3933354 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 114

Conread position: 41-328
Cow position: chr1:10724203-10724484 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 164

Conread position: 41-328
Cow position: chr1:49972549-49972267 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 232

Conread position: 42-248
Cow position: chr1:77923334-77923542 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 159
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 56, 10

Conread position: 42-330
Cow position: chr1:3384314-3384031 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 103

Conread position: 42-335
Cow position: chr1:72037924-72037641 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 14

Conread position: 43-328
Cow position: chr1:18964743-18964463 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 210
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 56, 191

Conread position: 43-328
Cow position: chr1:76750346-76750069 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 195

Conread position: 44-251
Cow position: chr1:61043631-61043834 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 145
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 105, 42

Conread position: 45-328
Cow position: chr1:69768208-69768485 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 111

Conread position: 45-328
Cow position: chr1:72112636-72112912 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 101

Conread position: 45-328
Cow position: chr1:91900650-91900928 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 231

Conread position: 45-330
Cow position: chr1:79635371-79635091 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 80

Conread position: 46-201
Cow position: chr1:56142715-56142556 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 53, 0

Conread position: 46-219
Cow position: chr1:26517260-26517084 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 143
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 53, 0

Conread position: 46-232
Cow position: chr1:53200174-53200361 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 54, 23

Conread position: 46-236
Cow position: chr1:18194139-18194332 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 148
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 53, 0

Conread position: 46-245
Cow position: chr1:98786565-98786768 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 53, 0

Conread position: 46-261
Cow position: chr1:21592218-21592434 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 159
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 53, 116

Conread position: 46-268
Cow position: chr1:25053922-25054142 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 173
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 54, 121

Conread position: 46-269
Cow position: chr1:81862355-81862130 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 100

Conread position: 46-269
Cow position: chr1:86611731-86611962 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 61, 91

Conread position: 46-271
Cow position: chr1:54393969-54393753 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 159
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 204, 34

Conread position: 46-272
Cow position: chr1:38476937-38477167 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 46-272
Cow position: chr1:89482579-89482807 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 177
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 54, 114

Conread position: 46-278
Cow position: chr1:22619042-22618808 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 98

Conread position: 46-278
Cow position: chr1:40966788-40966552 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 46-278
Cow position: chr1:48248533-48248768 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 16

Conread position: 46-278
Cow position: chr1:50210213-50209977 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 46-278
Cow position: chr1:57569460-57569696 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 46-278
Cow position: chr1:62243024-62242790 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 197

Conread position: 46-278
Cow position: chr1:85793310-85793546 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 175
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 54, 0

Conread position: 46-278
Cow position: chr1:87435875-87436111 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 46-278
Cow position: chr1:98658292-98658057 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 167
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 75, 65

Conread position: 46-313
Cow position: chr1:82654286-82654543 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 199
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 52, 115

Conread position: 46-319
Cow position: chr1:33552558-33552833 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 230

Conread position: 46-323
Cow position: chr1:40436194-40435923 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 192
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 72, 63

Conread position: 46-324
Cow position: chr1:67910178-67910460 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 205
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 54, 100

Conread position: 46-325
Cow position: chr1:29363924-29364198 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 229

Conread position: 46-325
Cow position: chr1:72185251-72184974 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 208
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 57, 97

Conread position: 46-325
Cow position: chr1:77105391-77105124 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 202
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 54, 20

Conread position: 46-326
Cow position: chr1:24652893-24653169 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 239

Conread position: 46-326
Cow position: chr1:57364719-57364439 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 232

Conread position: 46-326
Cow position: chr1:71561116-71560841 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 220

Conread position: 46-326
Cow position: chr1:94661298-94661575 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 105

Conread position: 46-327
Cow position: chr1:57423203-57422927 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 229

Conread position: 46-327
Cow position: chr1:82477605-82477881 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 227

Conread position: 46-327
Cow position: chr1:82565742-82566011 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 212
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 54, 178

Conread position: 46-328
Cow position: chr1:8826683-8826959 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 207
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 54, 205

Conread position: 46-328
Cow position: chr1:12060579-12060303 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 204

Conread position: 46-328
Cow position: chr1:17011109-17010832 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 229

Conread position: 46-328
Cow position: chr1:17034965-17034689 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 103

Conread position: 46-328
Cow position: chr1:17940141-17939865 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 110

Conread position: 46-328
Cow position: chr1:19184692-19184409 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 233

Conread position: 46-328
Cow position: chr1:20830524-20830798 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 148

Conread position: 46-328
Cow position: chr1:21089060-21089336 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 166

Conread position: 46-328
Cow position: chr1:25551593-25551872 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 229

Conread position: 46-328
Cow position: chr1:26584729-26585000 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 37

Conread position: 46-328
Cow position: chr1:26813443-26813167 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 37

Conread position: 46-328
Cow position: chr1:28874696-28874975 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 228

Conread position: 46-328
Cow position: chr1:30074497-30074776 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 240

Conread position: 46-328
Cow position: chr1:30282223-30281935 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 222
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 54, 237

Conread position: 46-328
Cow position: chr1:30533395-30533116 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 229

Conread position: 46-328
Cow position: chr1:31364474-31364197 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 206
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 57, 238

Conread position: 46-328
Cow position: chr1:32566296-32566028 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 214
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 54, 22

Conread position: 46-328
Cow position: chr1:33713700-33713987 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 220
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 54, 119

Conread position: 46-328
Cow position: chr1:34694316-34694591 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 94

Conread position: 46-328
Cow position: chr1:39545416-39545690 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 76

Conread position: 46-328
Cow position: chr1:40683113-40682838 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 229

Conread position: 46-328
Cow position: chr1:42738059-42738332 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 140

Conread position: 46-328
Cow position: chr1:45003829-45004100 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 64

Conread position: 46-328
Cow position: chr1:52357630-52357353 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 105

Conread position: 46-328
Cow position: chr1:55275401-55275126 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 213
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 54, 45

Conread position: 46-328
Cow position: chr1:55320454-55320184 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 209
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 54, 109

Conread position: 46-328
Cow position: chr1:56192535-56192254 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 235

Conread position: 46-328
Cow position: chr1:59207450-59207174 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 229

Conread position: 46-328
Cow position: chr1:63503417-63503692 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 203
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 77, 23

Conread position: 46-328
Cow position: chr1:63604142-63603865 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 227

Conread position: 46-328
Cow position: chr1:65387941-65388218 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 227

Conread position: 46-328
Cow position: chr1:67002783-67003059 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 93

Conread position: 46-328
Cow position: chr1:68605918-68605636 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 232

Conread position: 46-328
Cow position: chr1:72082386-72082659 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 90

Conread position: 46-328
Cow position: chr1:73069429-73069156 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 208
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 64, 37

Conread position: 46-328
Cow position: chr1:74285050-74284776 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 203

Conread position: 46-328
Cow position: chr1:76619850-76619573 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 220

Conread position: 46-328
Cow position: chr1:79455324-79455049 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 133

Conread position: 46-328
Cow position: chr1:80357541-80357256 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 202
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 54, 204

Conread position: 46-328
Cow position: chr1:81288764-81289041 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 79

Conread position: 46-328
Cow position: chr1:81778074-81778353 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 211
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 52, 25

Conread position: 46-328
Cow position: chr1:82911200-82910923 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 229

Conread position: 46-328
Cow position: chr1:82922534-82922260 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 123

Conread position: 46-328
Cow position: chr1:86508266-86507999 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 218
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 54, 71

Conread position: 46-328
Cow position: chr1:88132405-88132682 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 238

Conread position: 46-328
Cow position: chr1:90607249-90606959 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 213
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 54, 96

Conread position: 46-328
Cow position: chr1:91891492-91891215 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 226

Conread position: 46-328
Cow position: chr1:93856141-93856418 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 235

Conread position: 46-328
Cow position: chr1:99915070-99915338 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 48

Conread position: 46-328
Cow position: chr1:101012555-101012282 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 186

Conread position: 46-328
Cow position: chr1:102433411-102433128 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 136

Conread position: 46-328
Cow position: chr1:102550133-102550401 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 211
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 52, 63

Conread position: 46-329
Cow position: chr1:33351198-33351474 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 196
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 52, 157

Conread position: 46-330
Cow position: chr1:24442732-24442455 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 212
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 54, 179

Conread position: 46-330
Cow position: chr1:50988668-50988393 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 201
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 70, 61

Conread position: 46-330
Cow position: chr1:67833505-67833225 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 230

Conread position: 46-330
Cow position: chr1:69404629-69404908 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 227

Conread position: 46-330
Cow position: chr1:69416665-69416378 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 196
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 53, 109

Conread position: 46-332
Cow position: chr1:5503593-5503873 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 128

Conread position: 46-332
Cow position: chr1:6198669-6198383 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 232

Conread position: 46-332
Cow position: chr1:40056733-40057015 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 230

Conread position: 46-332
Cow position: chr1:85778826-85778542 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 213
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 54, 230

Conread position: 46-332
Cow position: chr1:98617160-98616879 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 229

Conread position: 46-333
Cow position: chr1:29412570-29412292 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 213
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 54, 118

Conread position: 46-333
Cow position: chr1:86546508-86546227 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 229

Conread position: 46-334
Cow position: chr1:89768912-89768630 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 148

Conread position: 46-335
Cow position: chr1:46837253-46837529 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 205
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 52, 172

Conread position: 46-335
Cow position: chr1:55778216-55778495 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 39

Conread position: 46-335
Cow position: chr1:58338469-58338753 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 64

Conread position: 46-335
Cow position: chr1:61729625-61729340 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 208
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 106, 6

Conread position: 46-336
Cow position: chr1:30520418-30520703 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 162

Conread position: 46-336
Cow position: chr1:102780711-102780424 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 208
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 54, 11

Conread position: 47-327
Cow position: chr1:5355306-5355031 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 75

Conread position: 47-328
Cow position: chr1:1828680-1828404 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 206
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 53, 237

Conread position: 47-328
Cow position: chr1:21116204-21115931 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 28

Conread position: 47-332
Cow position: chr1:62804545-62804268 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 84

Conread position: 48-325
Cow position: chr1:62921190-62921460 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 195

Conread position: 48-328
Cow position: chr1:56724775-56725050 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 227

Conread position: 52-248
Cow position: chr1:22844116-22844310 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 135
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 70, 57

Conread position: 52-277
Cow position: chr1:13581359-13581132 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 153
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 136, 0

Conread position: 52-328
Cow position: chr1:74304745-74304464 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 192
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 48, 204

Conread position: 53-325
Cow position: chr1:57658530-57658815 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 200
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 47, 69

Conread position: 56-327
Cow position: chr1:9260124-9260390 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 215

Conread position: 56-328
Cow position: chr1:21996376-21996110 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 216

Conread position: 56-328
Cow position: chr1:33852908-33853175 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 219

Conread position: 56-336
Cow position: chr1:33897899-33898174 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 219

Conread position: 61-335
Cow position: chr1:72137625-72137900 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 197
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 39, 224

Conread position: 66-332
Cow position: chr1:27112787-27112529 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 185
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 39, 97

Conread position: 75-278
Cow position: chr1:67287996-67288203 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 163
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 25, 0

Conread position: 82-328
Cow position: chr1:26896400-26896635 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 184
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 18, 75

Conread position: 94-328
Cow position: chr1:47161952-47161725 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 161
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 23, 175

Conread position: 98-242
Cow position: chr1:77746445-77746589 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 115-334
Cow position: chr1:53365415-53365623 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 168
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 134, 37

Conread position: 120-271
Cow position: chr1:32909646-32909798 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 109
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 129, 0

Conread position: 123-328
Cow position: chr1:44142405-44142210 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 26, 90

Conread position: 126-330
Cow position: chr1:61749740-61749548 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 7, 0

Conread position: 133-327
Cow position: chr1:30716343-30716529 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 152
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 116, 139

Conread position: 135-328
Cow position: chr1:40575951-40576135 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 115, 59

Conread position: 135-330
Cow position: chr1:42891633-42891446 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 114, 140

Conread position: 145-318
Cow position: chr1:100594496-100594330 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 139
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 15, 127

Conread position: 148-327
Cow position: chr1:86594573-86594404 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 140
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 25, 72

Conread position: 148-328
Cow position: chr1:31416692-31416522 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 99, 109

Conread position: 148-330
Cow position: chr1:29904070-29903896 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 142
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 101, 115

Conread position: 153-336
Cow position: chr1:86703874-86704052 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 97, 119

Show alignments to all cow chromosomes.