Cow genome map
Conread name: | Ovi1-UMC-pd3ov4-002-c04 |
Conread position: | 1-328 |
Cow position: | chr16:1566628-1566298 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 183 |
Conread position: | 1-328 |
Cow position: | chr16:8815279-8814945 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 287 |
Conread position: | 1-328 |
Cow position: | chr16:26664578-26664892 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 99, 44 |
Conread position: | 1-328 |
Cow position: | chr16:34531124-34531453 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 19 |
Conread position: | 3-335 |
Cow position: | chr16:29034766-29035072 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 226 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 246, 73 |
Conread position: | 41-328 |
Cow position: | chr16:8665199-8664922 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 200 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 57, 82 |
Conread position: | 41-332 |
Cow position: | chr16:17949368-17949081 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 210 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 59, 244 |
Conread position: | 42-327 |
Cow position: | chr16:48911554-48911290 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 190 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 68, 0 |
Conread position: | 42-328 |
Cow position: | chr16:5662725-5663005 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 216 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 10 |
Conread position: | 45-218 |
Cow position: | chr16:28196353-28196177 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 135 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 45-235 |
Cow position: | chr16:5485611-5485804 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 152 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 54, 104 |
Conread position: | 45-278 |
Cow position: | chr16:31588291-31588049 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 178 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 45-324 |
Cow position: | chr16:49385918-49386188 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 187 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 48, 135 |
Conread position: | 45-328 |
Cow position: | chr16:10967216-10966935 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 204 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 58, 24 |
Conread position: | 45-328 |
Cow position: | chr16:18618241-18617961 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 200 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 75, 64 |
Conread position: | 45-334 |
Cow position: | chr16:51085045-51085328 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 179 |
Conread position: | 45-336 |
Cow position: | chr16:16229201-16229479 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 215 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 202, 65 |
Conread position: | 46-218 |
Cow position: | chr16:42735692-42735523 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 141 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 46-248 |
Cow position: | chr16:26979001-26979197 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 148 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 82, 54 |
Conread position: | 46-255 |
Cow position: | chr16:16270246-16270037 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 151 |
Alignm E-value: | 9e-27 |
Alignm gaps (pig, cow): | 60, 140 |
Conread position: | 46-272 |
Cow position: | chr16:18497427-18497197 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 180 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 46-272 |
Cow position: | chr16:49233602-49233374 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 170 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 41, 127 |
Conread position: | 46-278 |
Cow position: | chr16:3828451-3828214 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 171 |
Alignm E-value: | 9e-37 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 46-278 |
Cow position: | chr16:10374708-10374478 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 180 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 203, 61 |
Conread position: | 46-324 |
Cow position: | chr16:1959733-1959464 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 118 |
Conread position: | 46-324 |
Cow position: | chr16:25456592-25456319 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 216 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 227 |
Conread position: | 46-324 |
Cow position: | chr16:27823359-27823093 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 191 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 63, 107 |
Conread position: | 46-325 |
Cow position: | chr16:5890889-5891159 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 206 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 53, 85 |
Conread position: | 46-326 |
Cow position: | chr16:1861124-1861404 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 215 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 104 |
Conread position: | 46-326 |
Cow position: | chr16:27712295-27712025 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 206 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 61, 92 |
Conread position: | 46-327 |
Cow position: | chr16:3088315-3088039 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 216 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 229 |
Conread position: | 46-327 |
Cow position: | chr16:5119130-5118854 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 219 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 227 |
Conread position: | 46-327 |
Cow position: | chr16:20193283-20193007 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 217 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 229 |
Conread position: | 46-327 |
Cow position: | chr16:27594396-27594672 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 213 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 229 |
Conread position: | 46-327 |
Cow position: | chr16:49221028-49220754 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 222 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 109 |
Conread position: | 46-328 |
Cow position: | chr16:33414-33697 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 219 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 235 |
Conread position: | 46-328 |
Cow position: | chr16:838206-838478 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 212 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 108, 64 |
Conread position: | 46-328 |
Cow position: | chr16:2237880-2237606 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 212 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 53, 86 |
Conread position: | 46-328 |
Cow position: | chr16:2410045-2409768 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 222 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 220 |
Conread position: | 46-328 |
Cow position: | chr16:2482247-2481985 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 207 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 110, 64 |
Conread position: | 46-328 |
Cow position: | chr16:2726326-2726049 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 217 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 238 |
Conread position: | 46-328 |
Cow position: | chr16:3330818-3331094 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 229 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 229 |
Conread position: | 46-328 |
Cow position: | chr16:4474717-4474436 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 222 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 64 |
Conread position: | 46-328 |
Cow position: | chr16:5527496-5527221 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 216 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 186 |
Conread position: | 46-328 |
Cow position: | chr16:7465494-7465771 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 215 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 93 |
Conread position: | 46-328 |
Cow position: | chr16:12537059-12536787 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 203 |
Alignm E-value: | 4.99983e-42 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 46-328 |
Cow position: | chr16:18667276-18667551 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 209 |
Alignm E-value: | 7e-35 |
Alignm gaps (pig, cow): | 49, 23 |
Conread position: | 46-328 |
Cow position: | chr16:19778763-19778486 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 229 |
Conread position: | 46-328 |
Cow position: | chr16:20202860-20203141 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 215 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 237 |
Conread position: | 46-328 |
Cow position: | chr16:23809243-23809525 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 220 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 113 |
Conread position: | 46-328 |
Cow position: | chr16:23984189-23984468 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 215 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 34 |
Conread position: | 46-328 |
Cow position: | chr16:27732493-27732215 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 223 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 239 |
Conread position: | 46-328 |
Cow position: | chr16:28169433-28169156 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 213 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 229 |
Conread position: | 46-328 |
Cow position: | chr16:28470181-28469896 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 221 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 246 |
Conread position: | 46-328 |
Cow position: | chr16:29047911-29048188 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 220 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 222 |
Conread position: | 46-328 |
Cow position: | chr16:37479967-37479690 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 213 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 227 |
Conread position: | 46-328 |
Cow position: | chr16:40295274-40295001 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 40 |
Conread position: | 46-328 |
Cow position: | chr16:44899763-44899500 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 215 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 204, 54 |
Conread position: | 46-328 |
Cow position: | chr16:54324446-54324163 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 221 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 233 |
Conread position: | 46-330 |
Cow position: | chr16:14664925-14664648 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 213 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 198 |
Conread position: | 46-330 |
Cow position: | chr16:23535012-23534730 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 224 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 105 |
Conread position: | 46-332 |
Cow position: | chr16:7675568-7675288 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 230 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 64 |
Conread position: | 46-332 |
Cow position: | chr16:15568146-15568426 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 220 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 226 |
Conread position: | 46-332 |
Cow position: | chr16:25442518-25442799 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 223 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 227 |
Conread position: | 46-332 |
Cow position: | chr16:43896373-43896094 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 221 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 203 |
Conread position: | 46-334 |
Cow position: | chr16:10439147-10439428 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 229 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 203 |
Conread position: | 46-335 |
Cow position: | chr16:1433076-1433357 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 84, 67 |
Conread position: | 46-335 |
Cow position: | chr16:15185968-15186246 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 220 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 113 |
Conread position: | 46-335 |
Cow position: | chr16:51039225-51039516 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 208 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 63, 225 |
Conread position: | 47-248 |
Cow position: | chr16:3526136-3525932 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 156 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 49, 114 |
Conread position: | 47-327 |
Cow position: | chr16:28158457-28158746 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 246 |
Conread position: | 47-328 |
Cow position: | chr16:25258692-25258968 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 221 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 232 |
Conread position: | 48-325 |
Cow position: | chr16:5871778-5872055 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 216 |
Alignm E-value: | 7.00649e-45 |
Alignm gaps (pig, cow): | 52, 176 |
Conread position: | 48-328 |
Cow position: | chr16:23251079-23250818 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 210 |
Alignm E-value: | 4.99983e-42 |
Alignm gaps (pig, cow): | 51, 102 |
Conread position: | 52-312 |
Cow position: | chr16:32937415-32937660 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 181 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 59, 0 |
Conread position: | 52-328 |
Cow position: | chr16:25086507-25086777 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 211 |
Conread position: | 52-330 |
Cow position: | chr16:12245456-12245189 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 198 |
Alignm E-value: | 7e-35 |
Alignm gaps (pig, cow): | 48, 127 |
Conread position: | 58-328 |
Cow position: | chr16:25342872-25343136 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 204 |
Alignm E-value: | 7.00649e-45 |
Alignm gaps (pig, cow): | 42, 150 |
Conread position: | 64-328 |
Cow position: | chr16:16240386-16240128 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 203 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 61 |
Conread position: | 69-328 |
Cow position: | chr16:25261385-25261639 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 178 |
Alignm E-value: | 9e-27 |
Alignm gaps (pig, cow): | 35, 190 |
Conread position: | 112-278 |
Cow position: | chr16:55875353-55875194 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 121 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 137, 118 |
Conread position: | 119-336 |
Cow position: | chr16:22800709-22800499 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 165 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 36, 163 |
Conread position: | 126-326 |
Cow position: | chr16:20641154-20641344 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 145 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 120, 0 |
Conread position: | 126-328 |
Cow position: | chr16:16537773-16537966 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 153 |
Alignm E-value: | 7e-35 |
Alignm gaps (pig, cow): | 149, 0 |
Conread position: | 126-328 |
Cow position: | chr16:42747248-42747054 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 153 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 39, 26 |
Conread position: | 148-248 |
Cow position: | chr16:37452976-37452875 (view UCSC Genome Browser custom track) |
Alignm length: | 102 |
Alignm identity: | 84 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 148-328 |
Cow position: | chr16:4300994-4300811 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 133 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 30, 23 |
Conread position: | 180-327 |
Cow position: | chr16:18580984-18580845 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 117 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 70, 92 |
Conread position: | 195-332 |
Cow position: | chr16:40556872-40556743 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 108 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 54, 86 |
Show alignments to all cow chromosomes.