Cow genome map
| Conread name: | Ovi1-UMC-pd3ov4-002-c04 |
| Conread position: | 1-328 |
| Cow position: | chr27:16264529-16264215 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 143, 11 |
| Conread position: | 1-333 |
| Cow position: | chr27:26553915-26553583 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 171 |
| Conread position: | 45-328 |
| Cow position: | chr27:28079986-28080263 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 205 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 49, 227 |
| Conread position: | 46-188 |
| Cow position: | chr27:29056739-29056884 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 46-247 |
| Cow position: | chr27:10327150-10326946 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 167 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 46-265 |
| Cow position: | chr27:23319383-23319159 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 46-324 |
| Cow position: | chr27:25085131-25085412 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 58, 232 |
| Conread position: | 46-326 |
| Cow position: | chr27:25803117-25802841 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 68, 186 |
| Conread position: | 46-326 |
| Cow position: | chr27:27194777-27194502 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 76, 53 |
| Conread position: | 46-328 |
| Cow position: | chr27:797988-797711 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 229 |
| Conread position: | 46-328 |
| Cow position: | chr27:1676993-1676719 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 98 |
| Conread position: | 46-328 |
| Cow position: | chr27:8199387-8199664 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 227 |
| Conread position: | 46-328 |
| Cow position: | chr27:9331313-9331597 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 245 |
| Conread position: | 46-328 |
| Cow position: | chr27:9991637-9991360 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 220 |
| Conread position: | 46-328 |
| Cow position: | chr27:12748615-12748893 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 228 |
| Conread position: | 46-328 |
| Cow position: | chr27:13898891-13899163 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 37 |
| Conread position: | 46-328 |
| Cow position: | chr27:15035532-15035254 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 240 |
| Conread position: | 46-328 |
| Cow position: | chr27:15635764-15635487 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 227 |
| Conread position: | 46-328 |
| Cow position: | chr27:19525124-19525402 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 228 |
| Conread position: | 46-328 |
| Cow position: | chr27:26326640-26326917 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 238 |
| Conread position: | 46-328 |
| Cow position: | chr27:27664574-27664848 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 176 |
| Conread position: | 46-329 |
| Cow position: | chr27:1210935-1211213 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 227 |
| Conread position: | 46-332 |
| Cow position: | chr27:167349-167068 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 229 |
| Conread position: | 46-332 |
| Cow position: | chr27:3233943-3233663 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 168 |
| Conread position: | 46-336 |
| Cow position: | chr27:15274488-15274207 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 32 |
| Conread position: | 47-328 |
| Cow position: | chr27:4980952-4981225 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 167 |
| Conread position: | 48-328 |
| Cow position: | chr27:15373418-15373700 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 191 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 57, 215 |
| Conread position: | 52-327 |
| Cow position: | chr27:16032818-16032550 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 222 |
| Conread position: | 56-328 |
| Cow position: | chr27:5912505-5912767 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 202 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 43, 87 |
| Conread position: | 57-328 |
| Cow position: | chr27:23293135-23293395 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 43, 123 |
| Conread position: | 60-328 |
| Cow position: | chr27:8735763-8736026 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 46, 218 |
| Conread position: | 148-328 |
| Cow position: | chr27:8590757-8590931 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 14, 135 |
| Conread position: | 159-328 |
| Cow position: | chr27:10377434-10377595 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 87, 116 |
| Conread position: | 180-330 |
| Cow position: | chr27:27288211-27288353 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 69, 89 |
Show alignments to all cow chromosomes.