Cow genome map

Conread name: Ovi1-UMC-pd3ov4-002-c04

Conread position: 1-247
Cow position: chr3:64015928-64015677 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 186
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 73, 223

Conread position: 1-248
Cow position: chr3:57978967-57978717 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 178
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 27, 123

Conread position: 1-325
Cow position: chr3:56398693-56399022 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 227
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 55, 139

Conread position: 1-327
Cow position: chr3:2918909-2919243 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 287

Conread position: 1-327
Cow position: chr3:30330681-30330364 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 75

Conread position: 1-328
Cow position: chr3:595575-595906 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 292

Conread position: 1-328
Cow position: chr3:27919867-27920186 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 236
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 109, 75

Conread position: 1-328
Cow position: chr3:64026695-64026358 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 289

Conread position: 1-330
Cow position: chr3:37626436-37626760 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 234
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 53, 260

Conread position: 1-332
Cow position: chr3:72631502-72631841 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 171

Conread position: 1-336
Cow position: chr3:30617480-30617136 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 135

Conread position: 4-242
Cow position: chr3:2509423-2509176 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 186
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 52, 226

Conread position: 11-326
Cow position: chr3:64685626-64685325 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 216
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 71, 88

Conread position: 12-332
Cow position: chr3:50126090-50125789 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 200
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 165, 98

Conread position: 15-332
Cow position: chr3:24588058-24587771 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 213
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 42-272
Cow position: chr3:4736426-4736199 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 170
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 57, 165

Conread position: 42-326
Cow position: chr3:24644714-24644990 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 208
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 57, 10

Conread position: 42-328
Cow position: chr3:24354644-24354925 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 210
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 19, 10

Conread position: 42-328
Cow position: chr3:32621542-32621265 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 94

Conread position: 42-333
Cow position: chr3:39879530-39879244 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 203
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 58, 67

Conread position: 43-332
Cow position: chr3:82638589-82638876 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 192
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 57, 178

Conread position: 45-328
Cow position: chr3:19945747-19946027 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 193

Conread position: 45-328
Cow position: chr3:40338647-40338368 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 224

Conread position: 45-328
Cow position: chr3:77578634-77578370 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 201
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 55, 21

Conread position: 45-332
Cow position: chr3:23288833-23288552 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 129

Conread position: 45-335
Cow position: chr3:16076848-16077125 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 204
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 52, 117

Conread position: 45-336
Cow position: chr3:77444910-77445188 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 207
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 40, 0

Conread position: 46-159
Cow position: chr3:2906254-2906138 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 46-185
Cow position: chr3:18462336-18462201 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 112
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 54, 0

Conread position: 46-188
Cow position: chr3:51364286-51364141 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 46-207
Cow position: chr3:48229012-48228849 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 129
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 72, 64

Conread position: 46-212
Cow position: chr3:31416517-31416688 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 40, 0

Conread position: 46-215
Cow position: chr3:58949032-58949202 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 136
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 54, 101

Conread position: 46-219
Cow position: chr3:2853943-2853780 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 14, 0

Conread position: 46-230
Cow position: chr3:2367835-2367649 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 53, 75

Conread position: 46-234
Cow position: chr3:45034242-45034433 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 142
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 53, 0

Conread position: 46-238
Cow position: chr3:1742834-1743029 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 148
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 54, 0

Conread position: 46-244
Cow position: chr3:56338770-56338567 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 151
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 53, 0

Conread position: 46-256
Cow position: chr3:20382539-20382752 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 164
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 53, 75

Conread position: 46-265
Cow position: chr3:25687750-25687972 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 37

Conread position: 46-267
Cow position: chr3:74851646-74851421 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 52, 0

Conread position: 46-271
Cow position: chr3:56100187-56099956 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 163
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 53, 0

Conread position: 46-320
Cow position: chr3:29580112-29580392 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 215
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 54, 201

Conread position: 46-324
Cow position: chr3:45976001-45976273 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 210
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 21, 26

Conread position: 46-325
Cow position: chr3:65208688-65208952 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 46-326
Cow position: chr3:5952684-5952412 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 229

Conread position: 46-326
Cow position: chr3:19880147-19880422 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 229

Conread position: 46-326
Cow position: chr3:44925565-44925841 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 230

Conread position: 46-326
Cow position: chr3:46859791-46859516 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 229

Conread position: 46-326
Cow position: chr3:56295688-56295963 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 229

Conread position: 46-327
Cow position: chr3:4287589-4287863 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 229

Conread position: 46-327
Cow position: chr3:7157217-7156940 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 230

Conread position: 46-327
Cow position: chr3:18860920-18861200 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 233

Conread position: 46-327
Cow position: chr3:29329787-29329511 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 227

Conread position: 46-327
Cow position: chr3:34505850-34505574 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 229

Conread position: 46-327
Cow position: chr3:51857188-51856912 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 229

Conread position: 46-327
Cow position: chr3:58784653-58784377 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 229

Conread position: 46-327
Cow position: chr3:64652112-64652384 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 30

Conread position: 46-327
Cow position: chr3:68872252-68871978 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 220

Conread position: 46-328
Cow position: chr3:2709367-2709090 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 227

Conread position: 46-328
Cow position: chr3:2870291-2870568 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 229

Conread position: 46-328
Cow position: chr3:3524514-3524791 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 229

Conread position: 46-328
Cow position: chr3:4029235-4029511 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 219

Conread position: 46-328
Cow position: chr3:6876680-6876411 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 208
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 53, 11

Conread position: 46-328
Cow position: chr3:7248037-7248312 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 227

Conread position: 46-328
Cow position: chr3:10242156-10242433 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 238

Conread position: 46-328
Cow position: chr3:18813001-18813279 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 194

Conread position: 46-328
Cow position: chr3:19720157-19719878 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 200
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 54, 213

Conread position: 46-328
Cow position: chr3:19755459-19755184 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 6

Conread position: 46-328
Cow position: chr3:19799676-19799399 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 229

Conread position: 46-328
Cow position: chr3:19940433-19940704 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 175

Conread position: 46-328
Cow position: chr3:21181195-21180918 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 227

Conread position: 46-328
Cow position: chr3:23206371-23206096 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 121

Conread position: 46-328
Cow position: chr3:24444598-24444322 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 226

Conread position: 46-328
Cow position: chr3:27864677-27864950 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 201
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 54, 109

Conread position: 46-328
Cow position: chr3:30316049-30316327 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 236

Conread position: 46-328
Cow position: chr3:33634750-33635018 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 202
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 56, 115

Conread position: 46-328
Cow position: chr3:34029418-34029143 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 193

Conread position: 46-328
Cow position: chr3:36862955-36862678 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 229

Conread position: 46-328
Cow position: chr3:37970549-37970825 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 166

Conread position: 46-328
Cow position: chr3:38868090-38868371 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 231

Conread position: 46-328
Cow position: chr3:41209099-41208833 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 205
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 54, 75

Conread position: 46-328
Cow position: chr3:42448618-42448885 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 204
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 77, 64

Conread position: 46-328
Cow position: chr3:43191789-43191512 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 227

Conread position: 46-328
Cow position: chr3:43481298-43481566 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 193
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 43, 63

Conread position: 46-328
Cow position: chr3:46504053-46504329 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 25

Conread position: 46-328
Cow position: chr3:47087787-47088052 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 213
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 121, 6

Conread position: 46-328
Cow position: chr3:48057858-48057583 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 203

Conread position: 46-328
Cow position: chr3:49136063-49135785 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 228

Conread position: 46-328
Cow position: chr3:49543709-49543432 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 227

Conread position: 46-328
Cow position: chr3:53517112-53517389 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 220

Conread position: 46-328
Cow position: chr3:56146807-56147081 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 189

Conread position: 46-328
Cow position: chr3:56327610-56327898 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 140

Conread position: 46-328
Cow position: chr3:57483223-57482946 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 238

Conread position: 46-328
Cow position: chr3:58127295-58127566 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 203
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 63, 10

Conread position: 46-328
Cow position: chr3:59863065-59863342 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 227

Conread position: 46-328
Cow position: chr3:63240741-63240464 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 227

Conread position: 46-328
Cow position: chr3:64356463-64356178 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 217
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 54, 183

Conread position: 46-328
Cow position: chr3:66621699-66621990 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 210
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 54, 128

Conread position: 46-328
Cow position: chr3:66889467-66889188 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 231

Conread position: 46-328
Cow position: chr3:68698470-68698195 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 63

Conread position: 46-328
Cow position: chr3:68891068-68890797 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 211
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 55, 132

Conread position: 46-328
Cow position: chr3:69932331-69932056 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 64

Conread position: 46-328
Cow position: chr3:74059029-74059305 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 228

Conread position: 46-328
Cow position: chr3:78025918-78025643 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 132

Conread position: 46-329
Cow position: chr3:36877158-36876866 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 214
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 53, 176

Conread position: 46-330
Cow position: chr3:6687290-6687575 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 233

Conread position: 46-330
Cow position: chr3:15188312-15188591 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 231

Conread position: 46-332
Cow position: chr3:6783871-6784149 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 176

Conread position: 46-332
Cow position: chr3:40824895-40825177 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 7

Conread position: 46-336
Cow position: chr3:3840014-3839726 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 69

Conread position: 46-336
Cow position: chr3:16224387-16224673 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 230

Conread position: 46-336
Cow position: chr3:29575621-29575336 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 76

Conread position: 46-336
Cow position: chr3:54291079-54290795 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 210
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 54, 233

Conread position: 47-328
Cow position: chr3:5993584-5993308 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 205
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 53, 228

Conread position: 47-328
Cow position: chr3:72671037-72670776 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 204
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 203, 63

Conread position: 52-184
Cow position: chr3:38095465-38095600 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 52-214
Cow position: chr3:77425108-77425265 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 102, 48

Conread position: 52-328
Cow position: chr3:38494743-38495019 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 207
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 19, 226

Conread position: 56-328
Cow position: chr3:7478402-7478147 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 205
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 43, 154

Conread position: 57-278
Cow position: chr3:3058526-3058743 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 165
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 195, 26

Conread position: 57-335
Cow position: chr3:32200530-32200802 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 207
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 43, 210

Conread position: 59-326
Cow position: chr3:57454513-57454775 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 198
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 41, 95

Conread position: 78-328
Cow position: chr3:13725249-13725005 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 189
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 22, 5

Conread position: 86-328
Cow position: chr3:15054163-15053931 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 193
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 14, 138

Conread position: 86-328
Cow position: chr3:69436911-69436680 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 166
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 75, 13

Conread position: 93-328
Cow position: chr3:53049268-53049051 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 169
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 157, 59

Conread position: 98-272
Cow position: chr3:49334641-49334818 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 58, 135

Conread position: 112-328
Cow position: chr3:39024443-39024652 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 170
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 42, 161

Conread position: 121-328
Cow position: chr3:1886846-1886647 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 154
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 129, 151

Conread position: 126-328
Cow position: chr3:63002022-63001835 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 123, 14

Conread position: 136-336
Cow position: chr3:26722777-26722971 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 154
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 114, 136

Conread position: 145-336
Cow position: chr3:54864382-54864199 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 136
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 158-328
Cow position: chr3:67656836-67656993 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 98, 63

Conread position: 165-328
Cow position: chr3:18114069-18113914 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 85, 107

Show alignments to all cow chromosomes.