Cow genome map


           Conread name:
           Ovi1-UMC-pd3ov4-004-c08
        

               Conread position:
               1-171
               

               Cow position:
               chr22:12086403-12086230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               116, 144
               

               Conread position:
               1-215
               

               Cow position:
               chr22:18843536-18843313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               158
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               1-215
               

               Cow position:
               chr22:20912259-20912040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               140, 69
               

               Conread position:
               1-223
               

               Cow position:
               chr22:32529427-32529657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               163, 64
               

               Conread position:
               2-223
               

               Cow position:
               chr22:23228279-23228049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               141, 24
               

               Conread position:
               2-223
               

               Cow position:
               chr22:33603309-33603531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               14, 25
               

               Conread position:
               5-215
               

               Cow position:
               chr22:40745515-40745735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               67, 129
               

               Conread position:
               5-248
               

               Cow position:
               chr22:28138643-28138893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               182
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               140, 17
               

               Conread position:
               11-219
               

               Cow position:
               chr22:3288754-3288967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               162, 83
               

               Conread position:
               11-223
               

               Cow position:
               chr22:13997774-13997993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               170
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               131, 117
               
Show alignments to all cow chromosomes.